EMLSAG00000012262, EMLSAG00000012262-695028 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Homology
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IBA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IBA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IBA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IBA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation of synaptic transmission" evidence=IEA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0001662 GO:GO:0051967 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 TreeFam:TF334668 GeneTree:ENSGT00740000114953 OMA:VNGQWNG EMBL:AEMK01188348 EMBL:CU062538 EMBL:CU407189 EMBL:CU457396 EMBL:CU928568 Ensembl:ENSSSCT00000004819 ArrayExpress:F1RYR0 Uniprot:F1RYR0) HSP 1 Score: 59.6918 bits (143), Expect = 4.584e-8 Identity = 81/393 (20.61%), Postives = 163/393 (41.48%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAF-SIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G + P + P + F I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 429 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQEGPE--LMPKALFLRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 813
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IBA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IBA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IBA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IBA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation of synaptic transmission" evidence=IEA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0001662 GO:GO:0051967 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 TreeFam:TF334668 GeneTree:ENSGT00740000114953 CTD:2898 KO:K05202 OMA:VNGQWNG OrthoDB:EOG71G9W6 EMBL:DAAA02026130 EMBL:DAAA02026131 EMBL:DAAA02026132 EMBL:DAAA02026133 EMBL:DAAA02026134 EMBL:DAAA02026135 EMBL:DAAA02026136 EMBL:DAAA02026137 EMBL:DAAA02026138 EMBL:DAAA02026139 EMBL:DAAA02026140 EMBL:DAAA02026141 EMBL:DAAA02026142 RefSeq:NP_001179992.1 UniGene:Bt.32868 ProteinModelPortal:F1MG21 Ensembl:ENSBTAT00000015563 GeneID:615226 KEGG:bta:615226 NextBio:20899512 Uniprot:F1MG21) HSP 1 Score: 59.3066 bits (142), Expect = 7.215e-8 Identity = 79/392 (20.15%), Postives = 163/392 (41.58%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IBA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IBA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IBA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IBA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation of synaptic transmission" evidence=IEA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0001662 GO:GO:0051967 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 TreeFam:TF334668 GeneTree:ENSGT00740000114953 OMA:VNGQWNG OrthoDB:EOG71G9W6 EMBL:AAEX03008563 EMBL:AAEX03008564 Ensembl:ENSCAFT00000005766 Uniprot:F1P7K6) HSP 1 Score: 59.3066 bits (142), Expect = 7.681e-8 Identity = 79/392 (20.15%), Postives = 163/392 (41.58%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 449 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 832
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2" species:9606 "Homo sapiens" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0005886 "plasma membrane" evidence=TAS] [GO:0005887 "integral component of plasma membrane" evidence=TAS] [GO:0006810 "transport" evidence=NAS] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0007215 "glutamate receptor signaling pathway" evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IDA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IBA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IBA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IBA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IMP] [GO:0050804 "regulation of synaptic transmission" evidence=IDA] [GO:0050806 "positive regulation of synaptic transmission" evidence=IMP] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0005887 GO:GO:0001662 GO:GO:0007268 GO:GO:0051967 EMBL:CH471051 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 DrugBank:DB00142 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 Orphanet:88616 GO:GO:0050806 GO:GO:0005234 eggNOG:NOG316680 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 ChEMBL:CHEMBL2109241 TreeFam:TF334668 EMBL:U16126 EMBL:AJ252246 EMBL:AJ301608 EMBL:AJ301609 EMBL:AJ301610 EMBL:HM149335 EMBL:HM149336 EMBL:HM149337 EMBL:HM149338 EMBL:HM149339 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 PIR:A54260 RefSeq:NP_001159719.1 RefSeq:NP_068775.1 RefSeq:NP_786944.1 RefSeq:XP_005267002.1 RefSeq:XP_005267004.1 RefSeq:XP_005267005.1 UniGene:Hs.98262 PDB:3QXM PDBsum:3QXM ProteinModelPortal:Q13002 SMR:Q13002 BioGrid:109155 IntAct:Q13002 STRING:9606.ENSP00000397026 BindingDB:Q13002 GuidetoPHARMACOLOGY:451 PhosphoSite:Q13002 DMDM:2492627 PaxDb:Q13002 PRIDE:Q13002 DNASU:2898 Ensembl:ENST00000318991 Ensembl:ENST00000369137 Ensembl:ENST00000369138 Ensembl:ENST00000413795 Ensembl:ENST00000421544 GeneID:2898 KEGG:hsa:2898 UCSC:uc003pqn.3 UCSC:uc003pqo.4 UCSC:uc010kcw.3 UCSC:uc021zdk.1 CTD:2898 GeneCards:GC06P101846 H-InvDB:HIX0006094 HGNC:HGNC:4580 HPA:CAB022463 HPA:HPA014395 HPA:HPA014623 MIM:138244 MIM:611092 neXtProt:NX_Q13002 PharmGKB:PA164741600 InParanoid:Q13002 KO:K05202 OMA:VNGQWNG OrthoDB:EOG71G9W6 PhylomeDB:Q13002 SignaLink:Q13002 GeneWiki:GRIK2 GenomeRNAi:2898 NextBio:11469 PRO:PR:Q13002 ArrayExpress:Q13002 Bgee:Q13002 CleanEx:HS_GRIK2 Genevestigator:Q13002 Uniprot:Q13002) HSP 1 Score: 58.9214 bits (141), Expect = 8.498e-8 Identity = 79/392 (20.15%), Postives = 163/392 (41.58%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation of synaptic transmission" evidence=IEA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0001662 GO:GO:0051967 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 GeneTree:ENSGT00740000114953 EMBL:AAEX03008563 EMBL:AAEX03008564 Ensembl:ENSCAFT00000005767 Uniprot:F1P7K5) HSP 1 Score: 58.9214 bits (141), Expect = 8.632e-8 Identity = 79/392 (20.15%), Postives = 163/392 (41.58%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 417 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 800
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2" species:9606 "Homo sapiens" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0001662 GO:GO:0051967 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 UniGene:Hs.98262 GeneID:2898 KEGG:hsa:2898 CTD:2898 HGNC:HGNC:4580 KO:K05202 RefSeq:XP_005267003.1 ProteinModelPortal:F8WEZ8 SMR:F8WEZ8 Ensembl:ENST00000369134 NextBio:35514526 ArrayExpress:F8WEZ8 Bgee:F8WEZ8 Uniprot:F8WEZ8) HSP 1 Score: 58.9214 bits (141), Expect = 9.573e-8 Identity = 79/392 (20.15%), Postives = 163/392 (41.58%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 417 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 800
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IBA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IBA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IBA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IBA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation of synaptic transmission" evidence=IEA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0035235 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 TreeFam:TF334668 GeneTree:ENSGT00740000114953 OrthoDB:EOG71G9W6 EMBL:AADN03003011 EMBL:AADN03003170 EMBL:AADN03003214 Ensembl:ENSGALT00000024893 Uniprot:F1NU20) HSP 1 Score: 58.151 bits (139), Expect = 1.820e-7 Identity = 78/392 (19.90%), Postives = 163/392 (41.58%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +A+ W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFSYEIRLVEDGKYGAQEDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik2 "Glutamate receptor ionotropic, kainate 2" species:10116 "Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005887 "integral component of plasma membrane" evidence=IDA] [GO:0007165 "signal transduction" evidence=IDA] [GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IDA] [GO:0043113 "receptor clustering" evidence=IDA] [GO:0046328 "regulation of JNK cascade" evidence=IMP] [GO:0051402 "neuron apoptotic process" evidence=IMP] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0042803 GO:GO:0043525 GO:GO:0007268 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0043195 GO:GO:0043113 GO:GO:0032839 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0046328 GO:GO:0005234 eggNOG:NOG316680 GO:GO:0008328 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 ChEMBL:CHEMBL2094119 CTD:2898 KO:K05202 EMBL:Z11548 EMBL:Z11715 PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT PDB:3QLU PDB:3QLV PDB:4BDL PDB:4BDM PDB:4BDN PDB:4BDO PDB:4BDQ PDB:4BDR PDB:4H8I PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV PDBsum:4BDL PDBsum:4BDM PDBsum:4BDN PDBsum:4BDO PDBsum:4BDQ PDBsum:4BDR PDBsum:4H8I ProteinModelPortal:P42260 SMR:P42260 BioGrid:248480 DIP:DIP-29256N IntAct:P42260 MINT:MINT-8359884 STRING:10116.ENSRNOP00000000415 BindingDB:P42260 TCDB:1.A.10.1.11 PhosphoSite:P42260 PaxDb:P42260 PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260 EvolutionaryTrace:P42260 NextBio:610770 PRO:PR:P42260 Genevestigator:P42260 Uniprot:P42260) HSP 1 Score: 56.9954 bits (136), Expect = 3.315e-7 Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G + N W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik2 "glutamate receptor, ionotropic, kainate 2" species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear response" evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA;ISO;TAS] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA;IBA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005887 "integral component of plasma membrane" evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA;ISO] [GO:0006886 "intracellular protein transport" evidence=IEA;ISO] [GO:0007165 "signal transduction" evidence=IDA] [GO:0007268 "synaptic transmission" evidence=ISO;IMP] [GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA] [GO:0014069 "postsynaptic density" evidence=ISO] [GO:0015277 "kainate selective glutamate receptor activity" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0019228 "neuronal action potential" evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding" evidence=IPI] [GO:0032839 "dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IEA;ISO;IBA] [GO:0034220 "ion transmembrane transport" evidence=ISO;IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=ISO;IDA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential" evidence=ISO] [GO:0042734 "presynaptic membrane" evidence=IEA;ISO;IBA] [GO:0042802 "identical protein binding" evidence=IDA] [GO:0042803 "protein homodimerization activity" evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IEA;ISO] [GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA;ISO] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=IMP] [GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO;IBA] [GO:0046328 "regulation of JNK cascade" evidence=IMP] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA;ISO] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA;ISO] [GO:0050804 "regulation of synaptic transmission" evidence=ISO] [GO:0050806 "positive regulation of synaptic transmission" evidence=IEA;ISO] [GO:0051402 "neuron apoptotic process" evidence=IMP] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA;ISO;IDA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA;ISO] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA;ISO] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0042803 GO:GO:0043525 GO:GO:0007268 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0043195 GO:GO:0043113 GO:GO:0032839 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0046328 GO:GO:0005234 eggNOG:NOG316680 GO:GO:0008328 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 ChEMBL:CHEMBL2094119 CTD:2898 KO:K05202 EMBL:Z11548 EMBL:Z11715 PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT PDB:3QLU PDB:3QLV PDB:4BDL PDB:4BDM PDB:4BDN PDB:4BDO PDB:4BDQ PDB:4BDR PDB:4H8I PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV PDBsum:4BDL PDBsum:4BDM PDBsum:4BDN PDBsum:4BDO PDBsum:4BDQ PDBsum:4BDR PDBsum:4H8I ProteinModelPortal:P42260 SMR:P42260 BioGrid:248480 DIP:DIP-29256N IntAct:P42260 MINT:MINT-8359884 STRING:10116.ENSRNOP00000000415 BindingDB:P42260 TCDB:1.A.10.1.11 PhosphoSite:P42260 PaxDb:P42260 PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260 EvolutionaryTrace:P42260 NextBio:610770 PRO:PR:P42260 Genevestigator:P42260 Uniprot:P42260) HSP 1 Score: 56.9954 bits (136), Expect = 3.315e-7 Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G + N W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik2 "glutamate receptor, ionotropic, kainate 2 (beta 2)" species:10090 "Mus musculus" [GO:0001662 "behavioral fear response" evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity" evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral component of plasma membrane" evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IMP] [GO:0006886 "intracellular protein transport" evidence=IDA] [GO:0007165 "signal transduction" evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IGI;IMP] [GO:0008066 "glutamate receptor activity" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor complex" evidence=ISO;IC] [GO:0014069 "postsynaptic density" evidence=IDA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0019228 "neuronal action potential" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO;IBA] [GO:0031624 "ubiquitin conjugating enzyme binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding" evidence=ISO] [GO:0032839 "dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IPI] [GO:0034220 "ion transmembrane transport" evidence=IGI] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=ISO;IGI] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP] [GO:0042391 "regulation of membrane potential" evidence=IGI;IMP;IDA] [GO:0042734 "presynaptic membrane" evidence=IDA] [GO:0042802 "identical protein binding" evidence=ISO] [GO:0042803 "protein homodimerization activity" evidence=ISO] [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043113 "receptor clustering" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IGI] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA;TAS] [GO:0045211 "postsynaptic membrane" evidence=IDA] [GO:0046328 "regulation of JNK cascade" evidence=ISO] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IMP] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=ISO;IMP] [GO:0050804 "regulation of synaptic transmission" evidence=ISO] [GO:0050806 "positive regulation of synaptic transmission" evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=ISO;IGI] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IGI;IMP] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IGI;IMP] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 MGI:MGI:95815 Pfam:PF01094 GO:GO:0016021 GO:GO:0006886 GO:GO:0001662 GO:GO:0051967 GO:GO:0043025 GO:GO:0030054 GO:GO:0045202 GO:GO:0045211 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG316680 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 TreeFam:TF334668 GeneTree:ENSGT00740000114953 OMA:VNGQWNG OrthoDB:EOG71G9W6 EMBL:X66117 EMBL:D10054 EMBL:U31443 EMBL:AC113305 PIR:A43954 PIR:S35792 RefSeq:XP_006512605.1 RefSeq:XP_006512606.1 RefSeq:XP_006512607.1 RefSeq:XP_006512609.1 UniGene:Mm.332838 ProteinModelPortal:P39087 SMR:P39087 IntAct:P39087 PhosphoSite:P39087 PaxDb:P39087 PRIDE:P39087 Ensembl:ENSMUST00000079751 Ensembl:ENSMUST00000105484 Ensembl:ENSMUST00000105485 Ensembl:ENSMUST00000105487 GeneID:14806 InParanoid:P39087 PRO:PR:P39087 ArrayExpress:P39087 Bgee:P39087 Genevestigator:P39087 Uniprot:P39087) HSP 1 Score: 56.9954 bits (136), Expect = 3.461e-7 Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G + N W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592947443|gb|GAXK01011110.1| (TSA: Calanus finmarchicus comp3776687_c0_seq1 transcribed RNA sequence) HSP 1 Score: 61.2326 bits (147), Expect = 4.550e-9 Identity = 56/213 (26.29%), Postives = 94/213 (44.13%), Query Frame = 0
Query: 176 QIIAQKIGFDFEIVPYVE----WGGYSEANNNWTGITKNMVY------MGPFDVKE---------------FVTIVCPRPRPLPKINNIIIPFSKNVW---IGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPF-GEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSN 359
++I +K+G + V Y WG + + W+G ++Y + D+KE V +V +P P+ INNII PF+ +W IGTF + I+ I V + W+ E P + F +S +PF G PN W +++ ++ L M +I YT NL + L+ + +PIDS+ ++ S+
Sbjct: 649 KLIGRKLG---QTVSYTHCWWSWGQFDKEKGKWSGAVGKVLYGDADLAVNSLDIKEDRQSVVDFTPSPYGNEVILVSQKPEPISTINNIIRPFNNLIWGLTIGTFLIFAILFVIFFFV--LSNVWKEMNEKHPD------VLDFALSPFVPFIGGDFPN-WFPRWTSGEFLVFVLSLFGMFVIFFYTSNLLADLVQKEFTKPIDSMSDIISSD 1251
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920893|gb|GAXK01037482.1| (TSA: Calanus finmarchicus comp682975_c0_seq7 transcribed RNA sequence) HSP 1 Score: 45.8246 bits (107), Expect = 2.663e-4 Identity = 61/279 (21.86%), Postives = 116/279 (41.58%), Query Frame = 0
Query: 123 GLNKIGYWNNY------GNYI-VYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEE-------EHPMIQIIAQ-----KIGFDFEIVPYVEWGGYSEANNNWTGITKNMV----------------------YMGPFDVKEFVTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
GL K+G W+++ N+ Y + SL ++ + S P M E+ E I +IA+ K + F+ V +G +++ W G+ ++ + PF + ++++ +P+ P++ + + P S +VWI F+YFIV +L +++ +P P + ++ F + + F G + P S + +I W +++I SYT NL ++L V E PI+S E+L
Sbjct: 162 GLEKVGSWHDHFGIKFSRNFTESYSEIVESLQNKTLVVTTIMSPPYSMFKESSEKLVGNDAFEGFAIDLIAEIAQILKFNYTFKWVDDGAYGYHNKDTGEWNGLMGELLSQKADLAIADLSITYEREKAVDFSNPF-MTLGISVLYRKPKKQDPELFSFMSPLSLDVWIYMVFAYFIVSILLFILARFSPYEWDNPH--PCNEQEVLVNEFSLCNSLWFAVGSLMQQGSDLEPKSVSTRMIAAMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 989
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920896|gb|GAXK01037479.1| (TSA: Calanus finmarchicus comp682975_c0_seq4 transcribed RNA sequence) HSP 1 Score: 46.2098 bits (108), Expect = 2.743e-4 Identity = 37/138 (26.81%), Postives = 68/138 (49.28%), Query Frame = 0
Query: 223 VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
++I+ +P+ P++ + + P S +VWI F+YFIV +L +++ +P P + ++ F + + F G + P S + +I W +++I SYT NL ++L V E PI+S E+L
Sbjct: 1097 ISILYRKPKKEDPELFSFMSPLSLDVWIYMVFAYFIVSILLFILARFSPYEWDNPH--PCNEQEVLVNEFSLCNSLWFAVGSLMQQGSDLEPKSVSTRMIAAMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 1504
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920897|gb|GAXK01037478.1| (TSA: Calanus finmarchicus comp682975_c0_seq3 transcribed RNA sequence) HSP 1 Score: 45.8246 bits (107), Expect = 3.899e-4 Identity = 37/138 (26.81%), Postives = 68/138 (49.28%), Query Frame = 0
Query: 223 VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
++I+ +P+ P++ + + P S +VWI F+YFIV +L +++ +P P + ++ F + + F G + P S + +I W +++I SYT NL ++L V E PI+S E+L
Sbjct: 1097 ISILYRKPKKEDPELFSFMSPLSLDVWIYMVFAYFIVSILLFILARFSPYEWDNPH--PCNEQEVLVNEFSLCNSLWFAVGSLMQQGSDLEPKSVSTRMIAAMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 1504
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592767825|gb|GAXK01186743.1| (TSA: Calanus finmarchicus comp3401914_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 1.836e-3 Identity = 54/223 (24.22%), Postives = 97/223 (43.50%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEIVPYV--EWGGYSEANN-------------NW--TGITKN----MVYMGP--FDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKP--LKWISRFEVSYGIPFGEGVPNKWIGPYSA-FSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERP-IDSLEELKVSNYQFVVGLYEQ 369
M+++I +K GF + P EWG E+ N +W +G+ + +V P FD +++ V P P + K + I PF++ +W+ + + G L +++ I + ++ E + + + S+ GE V S +I+ W L A+V SY +RS+ I NP P +D+L E+ SN + + LY +
Sbjct: 681 MVEVIGEKYGFSWVYDPPADGEWGAVQESGNMSGLIGQAAYGSVDWVMSGVMETRDRWLVADNPVSFD-SDYMVFVSPAPAEISKATSPIKPFTQTMWLLVIVTVLVFAGSLVVMATITQ------KMGKGEDDGWMHFSNCVWFSFSTFIGESVMRYEAAIDSGVIKMIVGSWYLYALVATASYAGEIRSFFI-NPGVAPALDNLREVVDSNLPWGLILYGE 1325
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592949771|gb|GAXK01008782.1| (TSA: Calanus finmarchicus comp3549707_c0_seq1 transcribed RNA sequence) HSP 1 Score: 42.743 bits (99), Expect = 2.011e-3 Identity = 44/168 (26.19%), Postives = 73/168 (43.45%), Query Frame = 0
Query: 231 RPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRES-------MHYFLE 387
+ P++ + + P S +VWI F+Y +V +L +++ +P P ++ F + + F G I P S + +I T W +++I SYT NL ++L V E PI+S E+L Q G E + R+S MH F+E
Sbjct: 205 KQAPELFSFMHPLSLDVWIYMVFAYLLVSILLYILARFSPYEWDNP--YPCNDEEVLVNEFSLYNSLWFTIGSLMQQGSDIIPRSLSARLIATMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDLS-KQTQIKYGCLES--GSTRAFFRDSKSVTFSRMHEFME 693
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920895|gb|GAXK01037480.1| (TSA: Calanus finmarchicus comp682975_c0_seq5 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 3.891e-3 Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 0
Query: 228 PRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI--YKSWRIHPEIKPAEKPLKWISR-----FEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
P+ +P P + + + P S +VWI T +Y V +L +++ Y+ HP + AE + S F + + G + K I + ++ W +++I SYT NL ++L V E PI+S E+L
Sbjct: 578 PQKKP-PDLFSFLSPLSLDVWIYTATAYLGVSILLFILARFSPYEWDNPHPCTEEAEVLVNEFSLCNSMWFTIGSLMQQGSDISPKAI----STRMVAGMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 967
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592801816|gb|GAXK01152752.1| (TSA: Calanus finmarchicus comp3178010_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.5874 bits (96), Expect = 4.512e-3 Identity = 52/237 (21.94%), Postives = 92/237 (38.82%), Query Frame = 0
Query: 148 IYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGI------TKNMVYMGPF-------DVKEFVTIVCPR--------PRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYK-SWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQ-LMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQ 361
IY D+L +G + + H + + + F IVP WG +E + W GI + + + F V F +C P I PF ++WI FF +LS + C+ ++ + PE + + + V +G +G W+ P S + I+ F L + L SY+ L S+L V P ++L+E++ +++
Sbjct: 17 IYGDNDDLLSGKQTAIGGIWGDVWHGL----EKTMNFSTRIVPGDGWGSLNE-DGTWNGIINGLIQNRTQIGIASFFYTQSRGTVAAFSPAICEGTDRMFIKYPGREASWTTYIDPFDSSLWISLFF-------LLSFIICLLSATYYLGPEQQENPDSFTFYNTAIVVFGSQIFQG---SWLDPKSISAKIIFFISFLFGVTLYASYSAKLISFLTVIKTTLPFNTLDEIRRTDFD 682
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920898|gb|GAXK01037477.1| (TSA: Calanus finmarchicus comp682975_c0_seq2 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 4.633e-3 Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 0
Query: 228 PRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI--YKSWRIHPEIKPAEKPLKWISR-----FEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
P+ +P P + + + P S +VWI T +Y V +L +++ Y+ HP + AE + S F + + G + K I + ++ W +++I SYT NL ++L V E PI+S E+L
Sbjct: 1860 PQKKP-PDLFSFLSPLSLDVWIYTATAYLGVSILLFILARFSPYEWDNPHPCTEEAEVLVNEFSLCNSMWFTIGSLMQQGSDISPKAI----STRMVAGMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 2249
BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920899|gb|GAXK01037476.1| (TSA: Calanus finmarchicus comp682975_c0_seq1 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 4.636e-3 Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 0
Query: 228 PRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI--YKSWRIHPEIKPAEKPLKWISR-----FEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
P+ +P P + + + P S +VWI T +Y V +L +++ Y+ HP + AE + S F + + G + K I + ++ W +++I SYT NL ++L V E PI+S E+L
Sbjct: 1877 PQKKP-PDLFSFLSPLSLDVWIYTATAYLGVSILLFILARFSPYEWDNPHPCTEEAEVLVNEFSLCNSMWFTIGSLMQQGSDISPKAI----STRMVAGMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 2266
BLAST of EMLSAG00000012262 vs. L. salmonis peptides
Match: EMLSAP00000012262 (pep:novel supercontig:LSalAtl2s:LSalAtl2s895:444:5506:-1 gene:EMLSAG00000012262 transcript:EMLSAT00000012262 description:"maker-LSalAtl2s895-snap-gene-0.13") HSP 1 Score: 1106.66 bits (2861), Expect = 0.000e+0 Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 0
Query: 1 MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEIFLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI 539
MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEIFLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI
Sbjct: 1 MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEIFLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI 539
BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|121438|sp|P26591.1|GLRK_LYMST (RecName: Full=Glutamate receptor; Flags: Precursor [Lymnaea stagnalis]) HSP 1 Score: 73.1738 bits (178), Expect = 2.902e-12 Identity = 83/327 (25.38%), Postives = 135/327 (41.28%), Query Frame = 0
Query: 77 KDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNI-----------------YSVCCDVLDSGPIRMGVLPPEEEH-PMIQIIAQKIGFDFEIVPYVEWGGYSE--ANNNWTGITKNMVY------MGPFDV-----------KEF----VTIVCPRPRPLPK-INNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHP-EIKPAEKPLKWISR-FEVSYGIPFGEGVPNKW---IGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
K HG + ++ + K + V D L ++ G KIGYWN + +PR N Y + +V+ G +G P E + + +A+K+GFDF ++ +V+ G Y +N W GI ++ + PF + K F ++I+ RP+P K + + P S +W+ F+Y V +L LVS R P E +E +I+ F +S + F G + I P S + I+ + W +++I SYT NL ++L V PIDS E+L
Sbjct: 348 KTGHGQMILEEMKKVKFEGVTGHVAFNEQGHRKDFTLGVYNVAMTRGTAKIGYWNEREGKLHAHNPRLFQNNSSDMNRTRIVTTIIKEPYVMVNNVIRDGKPLVGNEPVEGFCIDLTKAVAEKVGFDF-VIQFVKDGSYGSVLSNGTWDGIVGELIRHEADMAIAPFTITADRSRVIDFTKPFMSLGISIMIKRPQPAGKHFFSFMEPLSSEIWMCIVFAYIGVSVVLFLVS------RFSPNEWHLSEAHHSYIANDFSISNSLWFSLGAFMQQGCDISPRSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDL 667
BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|2492627|sp|Q13002.1|GRIK2_HUMAN (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Excitatory amino acid receptor 4; Short=EAA4; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; Flags: Precursor) HSP 1 Score: 58.9214 bits (141), Expect = 6.665e-8 Identity = 79/392 (20.15%), Postives = 163/392 (41.58%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|3287965|sp|P42260.2|GRIK2_RAT (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; Flags: Precursor) HSP 1 Score: 56.9954 bits (136), Expect = 2.600e-7 Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G + N W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|122065194|sp|P39087.4|GRIK2_MOUSE (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; AltName: Full=Glutamate receptor beta-2; Short=GluR beta-2; Flags: Precursor) HSP 1 Score: 56.9954 bits (136), Expect = 2.715e-7 Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G + N W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ +Y V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|122063506|sp|Q38PU3.1|GRIK2_MACFA (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; Flags: Precursor) HSP 1 Score: 56.225 bits (134), Expect = 4.917e-7 Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0
Query: 174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
+++ ++ +GF +EI V ++G +AN W G+ + ++ + P + K F+T I+ +P P + + + P S ++W+ + V +L +++ Y +P+ E ++ F G +G ++ + + I+ W +++I SYT NL ++L V E PIDS ++L K+ G + + + M F+ R +++K ++ + V+ D + ST+ ++ ++ I ++ +P S Y K + +++E M M ++++ N P + KE S + Q++ + FI LA +SV + + E S KN
Sbjct: 466 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849
BLAST of EMLSAG00000012262 vs. Select Arthropod Genomes
Match: EFX80846.1 (hypothetical protein DAPPUDRAFT_317967 [Daphnia pulex]) HSP 1 Score: 58.151 bits (139), Expect = 2.039e-8 Identity = 42/150 (28.00%), Postives = 72/150 (48.00%), Query Frame = 0
Query: 221 EFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPF------------GEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVS 358
E + +V PRP P+I + PF VW+ F + F V +++ S IY W++ + P + L + F + I + G +P + + +F I++ W L+A VL+ SY+ + SYL V + PI++ E+L S
Sbjct: 50 EPLAMVVPRPGEEPRIFAFVHPFQSTVWLLIFIACFTVVVFMTIFSGIY--WKLFLILDPGDASLT--TNFTIYGRITYYSIYMANTVTNQGNAIPLRRL----SFRILVGVWVLVATVLVNSYSSTVTSYLTVPKMKPPINTFEDLVAS 191
BLAST of EMLSAG00000012262 vs. nr
Match: gi|325120988|ref|NP_001191398.1| (glutamate receptor subunit protein GluR3 precursor [Aplysia californica] >gi|31074381|gb|AAP41205.1| glutamate receptor subunit protein GluR3 [Aplysia californica]) HSP 1 Score: 63.1586 bits (152), Expect = 9.125e-7 Identity = 73/295 (24.75%), Postives = 122/295 (41.36%), Query Frame = 0
Query: 110 DVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRY-------SLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQI-------------IAQKIGFDFEIVPYVEWGGYSE--ANNNWTGITKNMVY------MGPFDV-----------KEF----VTIVCPRPRPLPK-INNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHP-EIKPAEKPLKWISRFEVSYGIPFGEGVPNKW---IGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
D L I+ K+G+W+ + Q PR + N + ++ P M P+ P++ + +A+K+GFD+ I +V+ G Y +N +W GI ++ + PF + K F ++I+ RP+P K + + P S +W+ F+Y V +L LVS R P E +E + F +S + F G + I P S + I+ + W +++I SYT NL ++L V PIDS E+L
Sbjct: 381 DFTLDIYNVAMARRAAKVGFWSQREGRVHMQPPRLVPNPEETNENRTRIVVTIIKE-PYVMWKGAPKNGEPLVAVEHLEGFCIDLTKAVAEKVGFDYAI-RFVKDGSYGSVLSNGSWDGIVGELIAHEAHMAIAPFTITADRSRVIDFTKPFMSLGISIMIKRPQPAGKHFFSFMEPLSYEIWMCIVFAYIGVSVVLFLVS------RFSPNEWHLSETEHSIANDFSISNSLWFSLGAFMQQGCDISPRSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDL 667
BLAST of EMLSAG00000012262 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold147_size311475-snap-gene-2.17 (protein:Tk08610 transcript:maker-scaffold147_size311475-snap-gene-2.17-mRNA-1 annotation:"PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103579583") HSP 1 Score: 55.0694 bits (131), Expect = 4.652e-8 Identity = 60/242 (24.79%), Postives = 105/242 (43.39%), Query Frame = 0
Query: 186 FEIVPYVEWGGYSEANNNWTGITKNMVYMG------PFDVKEF--------------------VTIVCPRPRPLP-KINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHP-----EIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILT-FWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNY-QFVV---GLYEQIYAFADPYLRESMHYFLERDR 390
F++V +GG E + NW G+ + V MG F V + ++IV +PR P + + + PF+ +WI T SY +V +L +++ +P E + E + F + G +G + P + + +L W AM+++ SYT NL ++L V E+PI+S E+L +F V G E +A A+ ++M F++ +R
Sbjct: 1388 FKLVDDERYGGVDE-HGNWDGMVQE-VLMGQEDGGADFAVADLSVTSVRAGAVDFSMPWMNLGISIVFIKPRQAPPSLLSFLSPFTTEIWIYTGLSYVLVSVVLYILAQFCPQEWNNPLPCIEEPEELENQFSLANSFWFTIGTFLQQGCD---VAPIAISTRLLGGMWFFFAMIMVASYTANLAAFLTVETLEKPIESAEDLAAQTLIKFGVLEGGSTESFFANAELEPFKTMWEFMDMNR 1624 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012262 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000012262 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000012262 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 5
BLAST of EMLSAG00000012262 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000012262 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000012262 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s895:444..5506- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012262-695028 ID=EMLSAG00000012262-695028|Name=EMLSAG00000012262|organism=Lepeophtheirus salmonis|type=gene|length=5063bp|location=Sequence derived from alignment at LSalAtl2s895:444..5506- (Lepeophtheirus salmonis)back to top Add to Basket
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