EMLSAT00000012360, EMLSAT00000012360-708207 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012360
Unique NameEMLSAT00000012360-708207
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s903supercontigLSalAtl2s903:209876..211074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012360 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012360EMLSAG00000012360-695126Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055460EMLSAE00000055460-764388Lepeophtheirus salmonisexon
EMLSAE00000055461EMLSAE00000055461-764389Lepeophtheirus salmonisexon
EMLSAE00000055462EMLSAE00000055462-764390Lepeophtheirus salmonisexon
EMLSAE00000055463EMLSAE00000055463-764391Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774579auto774579Lepeophtheirus salmonispolypeptide
EMLSAP00000012360EMLSAP00000012360Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012360

>EMLSAP00000012360 ID=EMLSAP00000012360|Name=EMLSAP00000012360|organism=Lepeophtheirus salmonis|type=polypeptide|length=315bp
MKLSDMEAYYPQETTAGRQKAALGLSLGFSPNLHLDHNPHFQDFLSSTID
LGSFEVFQDVDLPFEGLDTIEEVESCEEHRPTSDSLSLERTQQFIEEMDI
FIKEHEENYPMTPCMQSPDPKVSLQSSESVDDETKEAVQMLDSLINGDIG
LEWREPNDCQSTTKSENSSYVLSLENIPDISNLSSIDSIFENPSATPVST
LSPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERK
KWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTM
KKLMTELGMIKVVQK
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mRNA from alignment at LSalAtl2s903:209876..211074-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012360-708207 ID=EMLSAT00000012360-708207|Name=EMLSAT00000012360|organism=Lepeophtheirus salmonis|type=mRNA|length=1199bp|location=Sequence derived from alignment at LSalAtl2s903:209876..211074- (Lepeophtheirus salmonis)
TGTTCCTTCTACCCACAAGGGTCGCACTGTCGGCTATTCAAAGCAAATAT
GAAATTATCAGATATGGAAGCATATTATCCCCAGGAAACAACCGCTGGCC
GCCAAAAGGCGGCACTCGGATTGAGCTTAGGCTTCTCTCCAAATCTCCAT
CTCGATCATAATCCACATTTTCAAGATTTCCTTAGCTCGACAATTGATTT
AGGTAACAATGATTGTCATTGATTTACATAGGATATTTATCCTAGTTTGT
TCATAACTTGATCCTTTTTTGTTTAATTTTAGGATCTTTCGAAGTATTTC
AAGATGTTGATCTTCCTTTCGAGGGTTTGGATACTATCGAAGAGGTTGAG
AGTTGTGAAGAACATCGACCTACGTCGGATAGTTTATCTTTAGAAAGGAC
TCAGCAATTTATTGAAGAAATGGATATTTTCATTAAAGAACACGAAGAAA
ATTACCCAATGACGCCTTGCATGCAATCTCCTGATCCCAAAGTATCACTT
CAATCATCAGAGTCAGTCGATGATGAAACGAAAGAAGCGGTTCAAATGCT
TGATTCCCTTATTAATGGGGATATTGGATTGGAATGGAGAGAGTAATTTA
GTGCATTCATACTTTTAAAAACTATTTTATTATTTCATATTTCATTATAT
GTAGACCAAATGATTGTCAATCAACAACCAAGTCTGAAAATTCTTCTTAT
GTTCTTTCTTTAGAAAATATTCCAGATATTTCTAATCTTTCATCAATAGA
TTCAATTTTTGAAAATCCATCAGCTACTCCTGTCAGCACTCTTTCACCTG
CGTCATCCACAGCCACTCTAGMAGATTTTAGTCCACCATCTAGCGTTACT
TCACCTAAACAACACAAGTATACAAATCGCAAAGAAAACACAAAGGGTGG
GCGTCAAAAGCTTGCAATCAAGGATAAAAAAGAAAGGAAAAAATGGCAAA
ATGTGGAGGCTGCTAGGCGCTATAGGTAACCAAGTTGGATTTTATTTTTT
CGTATCAGTAACTAATAATAATTATACTTTTTTCAGAGATAAAAAAAGAG
ATCAAGTCAATGAATATCAATTAAAATCCAAAGAGCTAAAAAAGAAGAAC
ACAAATTTAAAAGAAAAGCTGAGAGAAGTTGAAAATGAGTTATCAACGAT
GAAAAAGCTTATGACCGAGCTGGGAATGATTAAAGTAGTTCAAAAATGA
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