EMLSAT00000012496, EMLSAT00000012496-708343 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012496
Unique NameEMLSAT00000012496-708343
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s91supercontigLSalAtl2s91:347389..348360 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012496 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012496EMLSAG00000012496-695262Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056124EMLSAE00000056124-765052Lepeophtheirus salmonisexon
EMLSAE00000056125EMLSAE00000056125-765053Lepeophtheirus salmonisexon
EMLSAE00000056126EMLSAE00000056126-765054Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776662auto776662Lepeophtheirus salmonispolypeptide
EMLSAP00000012496EMLSAP00000012496Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012496

>EMLSAP00000012496 ID=EMLSAP00000012496|Name=EMLSAP00000012496|organism=Lepeophtheirus salmonis|type=polypeptide|length=106bp
MIVSTFCFIFKECTVELLFYMNASIAEYLILFMVLFDLVVCRLESSQVEW
LRARLALTITELHENMILVLTFILKDKSYHIRIECILKFLATECAIYTCI
LIIPIN
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mRNA from alignment at LSalAtl2s91:347389..348360-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012496-708343 ID=EMLSAT00000012496-708343|Name=EMLSAT00000012496|organism=Lepeophtheirus salmonis|type=mRNA|length=972bp|location=Sequence derived from alignment at LSalAtl2s91:347389..348360- (Lepeophtheirus salmonis)
ATGATTGTATCTACGTTTTGTTTTATATTCAAAGAATGCACTGTTGAACT
CTTATTTTATATGTATTTTAAAACACTTGTGTCCAATACATTTCTTATTA
TTTATGTAAAATCATCAAGACTTTTCACGACCATTGCTTTAACGCTAAGA
TCCCCTCCACACACTCTCCATCTATATATGTATTTTGAATTGATTTATTA
AATGTGATATGCTACTTCTTTTTGTACTCTATATTAATTAATTAATGATT
ATCATTATATGAAATGTACGTCAGTTCTTTTTAATAATTACAGTATTCGT
ACTCTTTGATTCCTTTTTATTTTATTTTTTAAAGGAACGCATCAATTGCG
GAATATTTAATTCTTTTTATGGTTCTGTTTGACTTAGTGGTGTGTCGACT
TGAGTCAAGCCAAGTCGAGTGGTTAAGAGCAAGACTCGCCTTAACTATTA
CAGAGCTCCATGAAAATATGATTCTGGGTAGGGATGGGCAGGAATGCAAT
CTTTTTTTTTCAGAAAAAACGTTTCAAATACTCTCAAAAAATAATTTCTT
ACTTTAAAAAAACAAACCAAAAATAACTTAATAATATACATTTCCTAAAC
ATATCTGACATGGCTAATAAAAAAAGGAAAAACTACACTAAAAATCAGAG
CTTTTCTTCAGTTTTTTAATACAAATATTTAAGAGTCTGAGTTAACGACC
ATTGTCTGAGAAATTTGACAAAACGTCAAGTTCTTAAGTGATTAAACATT
CTAAATTTGTTGGAAGTTCAAAGGAAAGCCAGAGGAAGATTCGGATTCAT
TGCCACTAACCAATCAGTTTTTGAGGTCATGACTTGTAGATTGTTTTTCA
ATTTAGTTCTAACATTCATACTAAAGGATAAATCTTATCACATTCGTATA
GAATGCATACTGAAGTTTCTGGCTACAGAATGTGCAATTTATACTTGCAT
CCTGATTATTCCTATAAATTGA
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