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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s965 | supercontig | LSalAtl2s965:349009..354192 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012711 >EMLSAP00000012711 ID=EMLSAP00000012711|Name=EMLSAP00000012711|organism=Lepeophtheirus salmonis|type=polypeptide|length=989bp
MQNGSINESXTKHRIKEPILRSSGDLLSAFTIKNIYRNNDEESKQKKVLH
KESSVRFNENENEEIILPRKFTIHQPIKSNTTPSVEKSSLLLEGGRILSA
GLYHSKHDRHRRLKAIDSPFKNESKKVFSEPKNGVSNKKSFSFLGEGFGF
LGDFKNTSVIGTKTESYSSSILDPNSTSKTRGVKKQIHLCTEKIMPSSVN
FYIVSTLLYIESINCQYHYTDNFVDHENSSMDKFSADIAPLNIRGPNSTC
DVAYLLQIPVCFTRELIQPPSMSYIPPKNCRYFENNEKIMICENEISNPF
TWTHSELHFLQLENHFTLKKLPNISNIHTRYLRIYAETLELINGGENSDR
IIGLEIYGGKFSHGTAYVQPSIKQPILLQLEYLSLMDNRNLGALHNKIFY
PLRYSPLVELNLRNCHIKIIGTKVFKYLKGLNHLDLRGNKALFTLGAKYP
FWITLHLFIKNIKILGLSDLGLLLVPQYILHQLQTSRVEVLNLSNNIYFH
FGYFLNKSVKLPHLRVMIIDNSEVISIRNYTFLHLGSSLKAISLRKNHLN
KLWPGFLLPTLEFLDLSYQREVSGQNPKFVIEPNIFKENPMTKLKVLRLR
GLKTDIIHRYTFEGLYNLEELDLSDSIVQTIEEGSFIELKSLKKLHLSNC
KNLKDLNGGHDNSIDDQMYVRMWSYFPNLKTLDLSHNRLIPWEKPIFLRN
KKLHTLFLRQCAITHISTSMLKDFSKLSFLDMSDNLRLTCGFDVIHFHNL
TLHRSGLNVFEYENGSGIFCHFPRNHTIRYVSFKNLFENFKDFFPPHIEG
NAXTITWLNKLLFTLLIISLSSLTIGIRYVYSNRYYISYHWMTSKMNYDE
NKNNNRSYTYDAFISYSDKDREWVFSELIPHLEEDFNVCVHERDFKVGMM
VVDNIVSCIDKSRKFIAVLSPSFVNRIIKFHLFYAFVDPKNNEVSEREGE
CCLELYLDIIVVFCGVNISRLNNVVVDCEWKREEEVFFD back to topmRNA from alignment at LSalAtl2s965:349009..354192- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012711-708558 ID=EMLSAT00000012711-708558|Name=EMLSAT00000012711|organism=Lepeophtheirus salmonis|type=mRNA|length=5184bp|location=Sequence derived from alignment at LSalAtl2s965:349009..354192- (Lepeophtheirus salmonis)
ATGCAAAATGGTTCCATCAACGAGAGTKCCACTAAGCACCGGATAAAGGA
GCCTATTCTCAGGTCATCTGGGGATTTGCTATCCGCTTTTACTATTAAAA
ACATTTATAGAAATAATGATGAGGAAAGCAAACAAAAAAAAGTTCTTCAT
AAGGAATCATCTGTTCGTTTTAACGAAAACGAAAATGAGGAAATAATTTT
ACCTCGAAAATTTACAATTCATCAACCCATTAAAAGTAATACAACCCCTT
CTGTAGAGAAATCTTCCCTTCTACTTGAAGGAGGACGGATATTATCTGCC
GGACTATATCACTCAAAGCACGACAGACATAGACGATTAAAAGCAATCGA
TTCTCCTTTTAAAAACGAATCGAAGAAAGTATTTTCTGAACCAAAAAATG
GAGTCAGTAATAAAAAGTCATTTAGTTTCCTTGGAGAAGGATTTGGCTTT
TTAGGGGACTTTAAAAATACATCTGTAATAGGAACTAAAACTGAATCATA
TTCCAGTAGTATCCTAGATCCCAATTCTACCTCTAAAACCAGGGGTGTCA
AGAAACAAATTCGTACAAACTGGGCTGAAAAATATCTTAAGTAAATGTAT
GATAACAAAATTGTAATGTTTAGAATACTTTATACATGGAACGTGCGTGC
ATTCATTTGTTCAATTCCTTCTTCTTTTTGACAAACCAAAGATTATTTTT
TATATTATTAGAGAGTAATTATATAATGAGGTTTAGTAATAAAAATCCAA
TCGACTCAATAAAATATGAAGTCGATTCGCGTCTTTTAGAACTTGAAAAA
CCTTCGACTCAAGTTGAGTCAAGTTGTTATTTAATAACAATGATGTAGTA
AATTGAAAAAAACTTTTTTTTTAGGGAACAAAAATTTAAATCGTTTTTTT
TGTTTTTGGTTAGAAATTGAGAATTTTTTGAATTCAAAAGAAACTGATTG
TCTTATTTGATATTTATAAAAATATTTAATCATTATTTCCATATAACTAC
TCTGTAATTTTTCAAAACCACACAACATTAACCCTACGTTAACAACACTA
GGAGGTCTTTAGNNNNNNNNNNNNNNGTAATTATTCATGTATATTTGCAA
TTGTGCCCTATGAATTTTTGAACCCAATAATTGTCAAACTGCTCAAATCG
AGGATTTTAAAACTCATGTATMKWATARGAAGTTATATAATTAATAAATT
TATGACACAATTGTTTTGATTAAATTCCTTGTTTCGTTTTATGAATATTT
TCATTATATAGAAATTAAAAAAATAACCTTAAGTTGGTCAACTACAGGAA
GAAGAAAAATAAGTGCGCAAACCATGTGATGAGTATTCTTTGTTTAAAGT
AATGTTGATGAAGATTTGACAGATTGACTCTCCTTTAACAAACAGAGATA
AGATATTGATAACAGTACAACACATATGTAGTATGAAACAGACAAGAAGG
TTTGACTCGAGTTTTTTTTCTTTCACTTGTCAAGATTTGTGCACTGAGAA
GATAATGCCTAGTTCTGTGAATTTCTACATAGTTTCTACATTATTGTATA
TTGAAAGTATAAATTGTCAATATCATTACACTGATAACTTTGTGGATCAT
GAGAATAGTTCAATGGATAAGTTCTCAGCGGATATAGCTCCACTCAATAT
TAGAGGACCTAATTCTACTTGTGACGTTGCATATTTATTACAAATCCCCG
TCTGCTTTACAAGAGAGCTCATCCAACCCCCATCTATGTCATACATTCCC
CCAAAGAATTGTAGATATTTTGAAAACAATGAAAAAATTATGATTTGTGA
AAACGAAATCTCAAACCCTTTTACATGGACTCACTCAGAACTACACTTTC
TTCAATTAGAGAACCATTTCACCCTAAAAAAATTACCAAATATTTCAAAC
ATCCACACACGATATCTCAGAATTTATGCCGAGACATTAGAGTTGATAAA
CGGTGGTGAAAATTCGGATCGAATCATAGGACTCGAAATTTACGGAGGGA
AATTTTCTCATGGAACTGGTAATTTGAATTCATTTATTTTTTGGGATTCC
TTTATTGGGTTTCCTCACTTGGTACGACTTATTTTGAGTAATAATTGTAT
AAGTTTAGCTTATGTGCAACCATCAATCAAGCAACCTATTCTGTTACAAC
TTGAGTATTTGAGTTTGATGGATAATCGAAACCTAGGAGCTTTACATAAT
AAAATTTTCTATCCACTTCGATATTCCCCATTGGTGGAACTTAATCTTCG
AAACTGTCACATTAAAATTATTGGGACTAAAGTTTTTAAGTACCTGAAAG
GTTTAAATCATTTGGACTTACGAGGTAATAAAGCACTTTTTACTCTTGGA
GCAAAATATCCATTCTGGATTACTCTACATCTCTTTATAAAAAATATTAA
AATTTTGGGCTTGAGTGATTTGGGTCTGCTCTTAGTTCCGCAATATATCC
TGCACCAATTACAAACAAGCAGGGTTGAAGTTCTTAATTTGTCCAATAAT
ATTTATTTCCATTTTGGATATTTTCTAAATAAATCCGTCAAATTGCCTCA
TCTTCGAGTGATGATAATTGACAACTCTGAAGTTATTTCGATCAGAAATT
ACACTTTCTTACATCTCGGATCAAGTCTAAAAGCCATTTCTCTAAGAAAG
AACCATCTCAACAAACTTTGGCCTGGGTTTCTTCTGCCGACATTGGAATT
TTTAGACCTTTCTTATCAACGAGAAGTATCTGGACAAAATCCAAAATTCG
TCATTGAACCTAATATATTTAAAGAAAATCCAATGACCAAACTAAAAGTT
CTTCGACTTAGAGGATTAAAGACTGATATAATTCATAGATATACTTTTGA
AGGGCTATATAATTTAGAAGAATTGGATCTTAGTGATTCCATTGTTCAAA
CCATAGAGGAGGGCTCTTTTATTGAACTTAAAAGCCTAAAAAAGTTGCAC
TTATCAAATTGCAAAAATTTAAAGGATCTAAATGGGGGACATGTAGCTGC
AATGCAGCATCTTCGATATTTGGATATTTCCCATACTAATTTATTCAARG
GAATTCCCAATGACTTCTCTTCAATGAATTTGAAATGCTGTTCAAGATTA
GAGTTTATAAACTTAACCAACACTTTTAATGATTTTCAGGATAATTCAAT
AGACGATCAAATGTATGTTCGAATGTGGTCATACTTTCCTAATTTGAAAA
CCCTTGATTTGAGCCACAATAGACTCATCCCATGGGAAAAACCAATATTT
TTGCGAAATAAGAAACTTCATACATTATTTTTGAGGCAATGTGCCATTAC
TCATATATCTACATCCATGCTTAAGGATTTCTCCAAACTATCTTTCTTGG
ATATGAGTGATAATTTAAGACTTACTTGTGGCTTTGATGTGATACACTTT
CATAACCTCACCTTGCACAGATCAGGGTAATTATAGCTATAACCATTATT
TAAAATTAATCTTTAGAATATATATATATTAAGTTTTGTTTCAGTTTAAA
TGTGTTCGAATATGAGAACGGCTCTGGAATATTTTGCCATTTTCCTCGAA
ACCATACCATTAGATATGTGTCCTTTAAAAATTTGTTTGAAAATTTTAAG
GACTTTTTCCCTCCTCATATTGAAGGGAATGCAKCTACCATTACATGGCT
TAATAAACTATTGTTTACACTCCTCATAATATCCTTATCTAGTCTCACGA
TTGGAATCCGATACGTGTACTCTAATCGTTATTACATCAGCTATCACTGG
ATGACTTCCAAAATGAATTATGATGAAAACAAGAACAATAATAGATCATA
CACCTATGATGCATTTATTTCTTACAGTGATAAAGACCGTGAATGGGTCT
TTTCAGAATTGATTCCCCACTTAGAGGAAGACTTCAATGTCTGTGTTCAT
GAAAGGGACTTCAAAGTCGGAATGATGGTTGTAGATAATATTGTGAGCTG
CATCGATAAGAGCAGGAAATTCATTGCTGTCCTAAGCCCTTCTTTTGTAA
ACAGTAAATGGTGCGCTTTTGAGATCCATGTGGCACAAAATCAAATGAAA
AAAAGGTAGCTGATCTGATTAAATATTACAATATGTTTATTAGTGTTGGG
TTCGGTCTGGAAATCTTAAATTGCTCTGAGACAGTGTTAATTTCGTCAAC
TATGACTAGACAAAATGTATTCGTCAAATAATATTTTTTTATATAATTTG
TTTGACTAAAACAAATATTTTCCTTTCTTGACCAAACAAAAAACTTTAAT
AAATGCTCTACAACTCAGATTCAGAATGTAATTTTCGAAAATGAAAAAAA
AAAAAACGAAATTAAAACTACTTTGAGAATTTTATAATTTTTATTCGGCC
AAATTAATTCTGCCTCTTGAAAAAATTATGTCAAGACCGCTCTCAAAGAA
AAATTCCATCTGGAACAGTCCCAAAAACAAAATCGATCAACATCGGTCTC
ATTATTTAGAATTCAGTCTTGACCAATTTTATAGAGGAATTGTTGATGAC
ACCATGTGTGTTACCCAAACTGAGAACATCCCTATAATAACGTTATATGT
ACTTTAAAGTGTTCATACGAGTTTAACTTGGTTAGAGAGAAAATCGGTCG
ACAGAGTGAAACCGAAAGATAATTCGTCCACGGTCTGAGATCGAGGCCTT
CACCGAAATAATGATCCAAATCGTTCATGAAAAAATCTTTTAGAACAAAA
ATGGTATAAAACCAGTCCCGGACCGAGTCTCAACACTAATATACCTATTA
TTGACGACATTCTTACTCTCTCTATATATATATACGTATATTGATTTTTT
TTCAGCCAGGAACAGTTTCTGGTAATCATAAAAGATAAGGTACCAAAAAA
ATAAATGATAAAGGACTCAACTATATTTTAAAAACATGGACATATATAAC
TTGGCCGAATGTATATTGCAAGACCGAGCGGCTCATATTTTGGAATCGAT
TACGAAAAGGCATTTTTTGAAGTATTCAAAATATCTATAGGAATCATAAA
ATTTCACTTATTTTATGCCTTTGTTGATCCGAAAAACAACGAAGTTTCTG
AGAGGGAGGGGGAATGCTGTTTGGAACTTTATCTAGATATTATTGTTGTT
TTCTGTGGTGTTAATATTTCTAGATTAAACAATGTAGTCGTCGATTGTGA
ATGGAAGAGGGAAGAAGAAGTTTTCTTCGATTGA back to top
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