EMLSAT00000012858, EMLSAT00000012858-708705 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012858
Unique NameEMLSAT00000012858-708705
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:2549575..2550603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012858 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012858EMLSAG00000012858-695624Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057737EMLSAE00000057737-766665Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780967auto780967Lepeophtheirus salmonispolypeptide
EMLSAP00000012858EMLSAP00000012858Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012858

>EMLSAP00000012858 ID=EMLSAP00000012858|Name=EMLSAP00000012858|organism=Lepeophtheirus salmonis|type=polypeptide|length=342bp
MVVSTDKPLNLPWVEKYRPKNLSELVSHEDIIGTIRRFVKEKRTPHLLFY
GPPGTGKTSAILAAAREIYSEGGMNSAVLELNASDDRGIDVVRGRILNFA
STKMVNFSGTNVPFKLIILDEADAMTQDAQNALRRIIEKFTENVRFCLIG
NYLSKIIPALQSRCTRFRFAPLQSEQIIPRLRDIVEKESLELTPDGEKAL
LALAHGDMRRILNILQSCSMAFPVVNEANIYACTGHPLPSDITKALESLL
NDXLSEXYHKIQNELQTNKGLSLIDILTELHLLVHRLEIPNKVKVYLLIK
MAXAEHRMLSGXSEKMQLGSIVGAFRIAREMIANETDAQLVA
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mRNA from alignment at LSalAtl2s97:2549575..2550603+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012858-708705 ID=EMLSAT00000012858-708705|Name=EMLSAT00000012858|organism=Lepeophtheirus salmonis|type=mRNA|length=1029bp|location=Sequence derived from alignment at LSalAtl2s97:2549575..2550603+ (Lepeophtheirus salmonis)
ATGGTTGTATCCACGGATAAGCCTCTAAATCTTCCATGGGTGGAGAAGTA
TAGGCCCAAAAATCTCTCAGAGTTAGTATCCCATGAAGATATTATTGGAA
CAATTCGTCGTTTCGTAAAGGAGAAGAGAACTCCACATTTACTCTTTTAT
GGTCCTCCTGGTACAGGTAAGACTTCCGCAATCCTTGCCGCTGCCAGAGA
AATTTACAGTGAGGGTGGGATGAATTCGGCCGTCCTAGAGTTAAACGCAA
GTGATGATCGAGGTATTGATGTTGTTAGAGGACGTATTCTTAATTTTGCT
TCGACTAAAATGGTCAACTTCAGTGGTACGAATGTGCCGTTCAAACTTAT
AATTTTAGACGAGGCTGATGCGATGACACAGGATGCTCAAAATGCCCTAC
GGCGTATTATTGAAAAGTTCACAGAGAATGTTCGCTTTTGTCTCATTGGT
AACTATTTGTCTAAAATCATTCCCGCTCTCCAAAGTAGATGTACACGTTT
TCGATTCGCTCCTTTACAGTCTGAACAAATCATTCCTCGTCTAAGGGACA
TAGTTGAAAAAGAGTCCTTAGAACTAACTCCTGATGGAGAAAAGGCACTT
TTGGCTCTTGCTCATGGGGACATGCGTAGAATATTGAATATTCTTCAGAG
TTGTTCTATGGCGTTCCCTGTTGTTAATGAAGCTAACATTTATGCTTGTA
CTGGGCATCCCCTCCCTTCCGATATTACGAAAGCKCTCGAGTCTCTTCTC
AATGACAAKCTCTCAGAARCCTACCATAAAATACAAAATGAGCTTCAAAC
TAATAAAGGACTCTCTTTGATTGATATTCTTACTGAGTTACATCTCTTAG
TTCATAGATTGGAAATACCCAATAAAGTGAAGGTATACCTGTTAATTAAA
ATGGCGGYTGCAGAACACAGAATGCTTAGTGGMGNTAGTGAGAAAATGCA
ATTGGGATCCATTGTTGGTGCATTTCGAATTGCCAGAGAAATGATAGCTA
ATGAAACTGACGCCCAATTGGTGGCCTAA
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