EMLSAT00000012899, EMLSAT00000012899-708746 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012899
Unique NameEMLSAT00000012899-708746
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s981supercontigLSalAtl2s981:178407..180133 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012899 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012899EMLSAG00000012899-695665Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057910EMLSAE00000057910-766838Lepeophtheirus salmonisexon
EMLSAE00000057911EMLSAE00000057911-766839Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773952auto773952Lepeophtheirus salmonispolypeptide
EMLSAP00000012899EMLSAP00000012899Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012899

>EMLSAP00000012899 ID=EMLSAP00000012899|Name=EMLSAP00000012899|organism=Lepeophtheirus salmonis|type=polypeptide|length=546bp
MALHVPKAPGFSSMMKDGARFLSGLEEAVINNISACKEFTSTLGSAYGPN
GMNKMVINHLEKLFVTNDAGTIMRELEVEHPAVKIMVLASQMMEQEVGDG
TNFVVVFCGALLKEAEDLLRMGLKPTEVAEGYELALEKAIEILETLSNLS
INNNRSAQEVQKAICASVMSKQYGYQDFLSELITKACISILPEETSFNVD
NIRVCKILGSGLLQSQVLPGMVFLRAVESNIINVKDAKIAIYTCPVDQTQ
TETKGTVLIKTAQELKDFSKGEEDLLEGQIKAIKDAGIDVIVSGGKIGDL
AMHYINKYDIMAIRLTSKWDVRRLCRTVGATPLPKMTAPTKEEMGFADKV
YVDELGDTSVVIFKLESKESRVATVVVRGSTENYMDDIERAIDDGVNTFK
GLCREPRLVPGAGATEIALSIKIGDYAKTCPGLDQYAINRFSLALQSIPR
ILAENSGLKSSEMIAQLLSAHQEGNSNAGVDIDAPNAAVVNTAEKEIYDL
LLTKFWGIKYATDAACTILRVDQMIMAKRAGGPKARGGGAMDQDDD
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mRNA from alignment at LSalAtl2s981:178407..180133-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012899-708746 ID=EMLSAT00000012899-708746|Name=EMLSAT00000012899|organism=Lepeophtheirus salmonis|type=mRNA|length=1727bp|location=Sequence derived from alignment at LSalAtl2s981:178407..180133- (Lepeophtheirus salmonis)
TCTATCAATACCATCGTGATGGCTCTCCATGTTCCTAAAGCTCCGGGGTT CTCCTCCATGATGAAAGATGGAGCCCGCTTCCTCTCTGGACTAGAAGAGG CCGTGATCAACAACATCAGCGCTTGCAAGGAGTTTACTTCCACTCTTGGC AGTGCTTATGGTCCCAATGGTATGAACAAAATGGTGATCAACCACCTTGA GAAGCTTTTTGTGACGAATGACGCCGGGACCATCATGAGGGAATTGGAAG TGGAGCATCCAGCCGTTAAAATCATGGTTTTAGCTTCCCAGATGATGGAG CAGGAGGTCGGTGATGGAACCAACTTCGTGGTCGTGTTTTGTGGTGCTCT ACTCAAAGAAGCCGAGGATTTGCTTCGTATGGGTCTTAAACCAACCGAAG TTGCAGAAGGATACGAATTGGCTCTCGAAAAGGCGATTGAAATCCTGGAA ACACTCTCAAATCTCTCTATTAACAACAATCGATCTGCTCAGGAAGTCCA AAAGGCCATTTGTGCCTCCGTTATGTCCAAACAATACGGATATCAGGATT TTCTCTCAGAGTTGATAACAAAAGCCTGCATTTCTATCCTCCCTGAAGAG ACCTCATTCAACGTCGACAATATAAGAGTATGTAAAATTTTGGGATCTGG TTTGCTTCAATCACAAGTTCTCCCTGGAATGGTCTTCCTTCGCGCCGTCG AGTCCAACATCATCAATGTCAAGGATGCTAAAATTGCAATCTATACATGT CCCGTGGACCAAACTCAAACGGAGACGAAGGGAACGGTACTCATCAAAAC GGCTCAAGAGCTTAAAGATTTTTCCAAGGGTGAAGAAGATTTATTAGAGG GACAAATCAAGGCCATCAAGGATGCCGGTATCGATGTCATTGTTTCTGGA GGGAAAATTGGGGATCTTGCTATGCATTATATCAACAAATATGATATTAT GGCCATTCGGCTGACATCCAAGTGGGATGTTCGAAGATTGTGCAGAACAG TTGGAGCCACTCCATTACCAAAAATGACTGCCCCAACTAAAGAAGAAATG GGGTTTGCCGACAAAGTATACGTTGATGAACTTGGTGATACCTCTGTAGT CATTTTTAAACTCGAGTCCAAGGAATCTAGAGTTGCCACCGTCGTTGTTC GTGGTTCTACTGAAAATTATATGGATGATATTGAAAGAGCTATTGATGAC GGAGTGAATACTTTTAAGGGACTTTGTCGGGTATTTTAATTATTTATATT TATATATTTTTAAGGAGAACTTTCTAATCCTTAATTTTTTTTAACTAGGA ACCACGCCTTGTTCCAGGAGCTGGAGCCACAGAGATTGCCCTCTCAATTA AAATTGGAGATTATGCAAAAACCTGTCCTGGGCTCGATCAATACGCCATC AACAGGTTTTCACTTGCTTTACAATCAATTCCACGTATTCTCGCAGAAAA CTCTGGATTAAAGTCATCTGAGATGATTGCTCAACTTTTGTCAGCTCATC AAGAAGGAAATTCCAATGCAGGAGTTGATATTGATGCGCCCAATGCTGCT GTTGTAAATACGGCCGAGAAAGAAATTTATGATCTCTTGTTAACCAAGTT CTGGGGTATAAAATATGCAACTGATGCAGCATGCACCATTCTCAGAGTCG ATCAAATGATTATGGCCAAACGTGCGGGTGGTCCCAAAGCTAGAGGAGGC GGKGCAATGGACCAAGATGATGATTAA
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