EMLSAT00000013034, EMLSAT00000013034-708881 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000013034
Unique NameEMLSAT00000013034-708881
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
Heme peroxidase F415 hpx female
  1. Adult
 -Missing-
-Missing- 		26.04.2019 - 09:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s99supercontigLSalAtl2s99:467720..469073 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000013034 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000013034EMLSAG00000013034-695800Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058569EMLSAE00000058569-767497Lepeophtheirus salmonisexon
EMLSAE00000058570EMLSAE00000058570-767498Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777945auto777945Lepeophtheirus salmonispolypeptide
EMLSAP00000013034EMLSAP00000013034Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000013034

>EMLSAP00000013034 ID=EMLSAP00000013034|Name=EMLSAP00000013034|organism=Lepeophtheirus salmonis|type=polypeptide|length=342bp
MLTQFGQFLDHDLTLTPEAHVDVPCCKHPHQDECNPIEVPTKDPFFSRFK
QTCLELTRSEKFCNSRPRQQFNAVTSFVDASNVYGSEEELAKELRVPNSY
LLRITLTKTGKSLLPLIDGEFLAGDERSSEMPGLATMHNLFLREHNRIAK
LLAENKGHRSNEEIFEEARRIVGAEMQNIVYGEFLYGILGYRIRDHGLPP
YGAFRQAXGLXPICNWKTRPSSISKQNWNLLKRWYKSPNDIDLFVAGISE
TPLDGSVLGETFTCLITRQFMALKDGDRFFFTHSGQSGSFNYDQIHNIRQ
RTLSQIICDNTQIKTVPISVFIHGSTKVPCSKHSTLNIALFK
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mRNA from alignment at LSalAtl2s99:467720..469073-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000013034-708881 ID=EMLSAT00000013034-708881|Name=EMLSAT00000013034|organism=Lepeophtheirus salmonis|type=mRNA|length=1354bp|location=Sequence derived from alignment at LSalAtl2s99:467720..469073- (Lepeophtheirus salmonis)
ATGCTTACCCAATTTGGACAATTTTTGGATCACGACTTAACGTTAACTCC
AGAGGCTCATGTGGATGTACCTTGTTGTAAACACCCTCATCAAGATGAAT
GTAATCCAATAGAAGTCCCTACAAAAGATCCCTTTTTTTCAAGGTTTAAA
CAAACATGCTTAGAACTGACACGATCCGAAAAATTTTGTAACTCTCGTCC
AAGGCAACAATTTAATGCTGTTACAAGTTTTGTGGATGCATCCAATGTCT
ATGGATCAGAAGAGGAACTTGCAAAGGAACTAAGAGTTCCCAACTCTTAT
TTGTTGCGAATTACTCTTACAAAAACTGGGAAATCACTTCTTCCGTTGAT
TGATGGGGAATTTCTTGCAGGTGATGAAAGGTCCAGTGAAATGCCTGGAC
TAGCGACAATGCACAATTTGTTTCTTAGAGAACATAATCGTATTGCTAAA
CTATTGGCTGAAAATAAAGGACATAGATCAAACGAGGAGATTTTTGAGGA
GGCTCGTAGAATTGTAGGAGCTGAAATGCAAAACATTGTCTATGGGGAAT
TTTTATACGGAATCTTGGGATATCGTATGTACCAATACAACTTGAATTTG
AAACCAAATTCATTCTATAKCCCTTTCATAAKCCCARCCKCCTCCAATTC
GTTTGCCACAGCTGCCTTTAGATATGGCCATAGCATGATTGAGGGTAGTA
TTCAAAGGAGATCTATAAATACCAATGCCCTTATAAGTACATTTCAATTG
AAAAATAATTTCAATAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
AAGTCGAGATCATGGACTTCCTCCTTATGGAGCATTTAGACAGGCTTKTG
GCCTCMAGCCAATTTGCAATTGGAAAACTAGACCATCAAGTATTTCTAAG
CAAAATTGGAATCTTCTGAAACGTTGGTATAAAAGCCCAAATGACATTGA
CCTGTTCGTTGCTGGTATTTCTGAGACTCCTTTAGATGGGTCTGTTTTGG
GTGAAACGTTCACCTGCCTTATTACTAGGCAATTTATGGCTTTAAAAGAT
GGAGATCGCTTCTTCTTCACCCATAGCGGTCAAAGTGGATCCTTTAATTA
TGATCAAATCCATAACATTCGGCAAAGAACCTTGAGTCAAATCATTTGCG
ACAACACACAAATCAAAACGGTACCCATTAGTGTATTTATACATGGATCC
ACCAAAGTACCTTGTTCTAAACATTCAACCTTGAACATTGCTCTCTTTAA
GTAA
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