EMLSAP00000001465, EMLSAP00000001465 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001465
Unique NameEMLSAP00000001465
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1439
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..124
NoneNo IPR availableCOILSCoilCoilcoord: 125..141
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353HLHcoord: 25..78
e-value: 3.0E-9
score: 46.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 27..98
e-value: 5.4E-11
score: 42.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 28..73
e-value: 2.4E-9
score: 36.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 19..72
score: 12.684
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 26..87

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001465 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001465EMLSAT00000001465-697312Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001465 ID=EMLSAP00000001465|Name=EMLSAP00000001465|organism=Lepeophtheirus salmonis|type=polypeptide|length=1439bp
MTNNVNKTVKSMKKNPLDVEAGKYRLWEKNRRDRFNAGLETLSASLPDYE
SGVSKWPKADIVERAINYIKALQAQRIPDDLQRRIKGLKRQNSKLREIIR
SKLAKEMDQKEFSKLNLQEIQSLXNKYEEAKANKENHPEKPAFLPTGDDH
SYSLCSHDSSEPDLEVASEEVVEESSQEITQTTLSSSSPPTPTTTNXPLV
NSLTLKPXTILSTPSGTLLNPTTWTVPHHSFIAIDPNPIISTVPYMMRPL
MKLALPRLSSRVPYIKKSQKKVVENNAKKNNKICKGLEKMNTTSVQVETS
QENVEEIIDLTPSEKSDDYMDECDKNDSSESLDLPSTHLDEFDLKASSTL
PDAILASEDPEEIDKKEKTDGSSKKDEKEYVKTSGEIVDTKDKSEESSSS
SPVTKPQEVIQIKKKSQAASGKSFDKSGGNGKSKSKSSYSIAALCQISVN
IGGDPLVASETMVNSPGVVSLNSFGTASPSVXPAPSTPPAPTPPIDKKEA
DKVIQXLKPVPPSVIKQAIDSKITGVCLAPPPPPPPLSDSCKVKSIMTPH
NTIPKKEIPSSTCVKKNEINFKEVDSSKKSIAAPLPPTKDSRLIELQYTN
HNKSIEKVQSYKKDPSMVQEVKCSSTVGSSTHITENSQNNSGSNTTASNT
KQWTQESQIHSSTHYQHALQSSTVTHIFPPPAPKTNPCNNNPSLALKESG
SQNIGKNSHYNKVVSTSLTGAVQSQQSHSHHQQQRQQSQVIHHQQQYIQG
YTTTTTNNNNQAPIQNSLLQQPQQQIHEHQEFHYGNNTTILNEFLGHPLQ
TALPSSTPSASSAALQFHQGTGNSGXSSNEALHRYNYSSITPSNPYQAHH
HHHHQSTTAIXPAANNPGTDYHHHNHHSTSGQGNSSTNGSSSANNQVHTA
NHQRQLNEQLQSSQNDQYFPYNRSYYTSTQNQYDLHASSSTSKQQHPQQQ
KVSQQLVQQQQQQLLQQHQQQLQAVASLQMNSTAMMQPNTFSVNQLVSNA
SSSSSKXQRKGSKRASTSSSYEVSNKKSTRNPGVASTNVSQSSXADKDSS
SRPKEDKKLLKVGPSSSRSSSTLSLKVPSSSLPRKGNYSAESLIMDPSQY
THNIAALEYQQMQQHQHQTNKTKMDFSSGWTTTPPSTTPSMMFPSIECTT
SAATQFCSMSPSPFPQDLEFSMFISGNDASSYVSPSVAAKNNFKASASVV
ASGHNKMNNNSQHHQNLLFDNSNIFPLPNLTPPTAVEDPYASFMNSSSHH
HHGAYNASSTTSNQKQSYNKHFGSVGNSGRFHSDYSTALNTTNSSTSSTS
NNNNSNQVAASSSSLVNFNLSTIFPEINDKFASSALVPPLTIPPPPIPPS
TSTSTSHSSSSQTLSSSSSSTKAASTIIPSVSSTNFRQAPASTSELLPHS
IAMLGHGNSGQTASMAFSGGGNISGLNFQHPNQQTSSHQ
back to top
Add to Basket