EMLSAP00000003771, EMLSAP00000003771 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003771
Unique NameEMLSAP00000003771
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length610
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 228..243
score: 23.56
coord: 285..302
score: 32.99
coord: 58..68
score: 47.52
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 6..65
e-value: 7.4E-8
score: 42.1
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 16..64
e-value: 3.4E-14
score: 52.7
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 1..69
score: 11.038
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 108..297
e-value: 1.8E-8
score: 44.2
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 177..303
e-value: 5.9E-11
score: 41.7
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 17..53
e-value: 1.5E-11
score: 44.3
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 54..94
e-value: 3.2E-15
score: 55.7
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 186..306
e-value: 7.0E-23
score: 80.5
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 102..306
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 18..303
NoneNo IPR availablePANTHERPTHR24082:SF19NUCLEAR HORMONE RECEPTORcoord: 18..303
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.555
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 17..81

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003771 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003771EMLSAT00000003771-699618Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003771 ID=EMLSAP00000003771|Name=EMLSAP00000003771|organism=Lepeophtheirus salmonis|type=polypeptide|length=610bp
MKRILSLMCLCIFHSFQGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQ
YCRLKKCIASGMSRDAVRFGRVPKREKAKIFSAMQSSRMKTQEANVLSEM
SDDXKIIEEIVRAHYDNXDYTKNKMEPFLAKAKENPVYVPCTGMVSQGMT
KGGIFKNNNIFHRHLPSLYNVSCVYLKVQTNNFFSPLQSLVCLNGDIIRK
ETINQLAAGNAKFLMDSVFELAQRLNQFNLSDAEIGIFCSVVIITPDRPG
LRNPELVQKIQNKLKNILNNILIPQHSDSPGIFSELLSMVHDLRTLNTLH
TEKFLKQCKIDRSDMGGSSEGSTLQKHLLHGSKGQLYPHQHHWNGGSHSQ
LDRESLGGVSSSESGCSSEVSRLTVLDLKVNNSVLLNALSLGSRFRLPSE
VAESEFNNYQHPCHQTSSPPSSGGCNXNTAANAKNHIINNNNDHHYPNNN
ASTHHQIQTPSSANPLVVASSKCPFKTSKLDSPSDSGIDSPKNQGTSICS
SPRSFVEEDKHLHKDEEENETLVVESSPPPQPQSSHVSEEXHPLLKRALQ
QPPQAYNGVPPLTSNAISYFQDEVYKPHKKFRRYNLSNSTAVPRIYLHHG
GPLGNEDCYP
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