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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001723 | Steroid hormone receptor | PRINTS | PR00398 | STRDHORMONER | coord: 228..243 score: 23.56 coord: 285..302 score: 32.99 coord: 58..68 score: 47.52 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | SMART | SM00399 | ZnF_C4 | coord: 6..65 e-value: 7.4E-8 score: 42.1 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PFAM | PF00105 | zf-C4 | coord: 16..64 e-value: 3.4E-14 score: 52.7 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS51030 | NUCLEAR_REC_DBD_2 | coord: 1..69 score: 11.038 |
IPR000536 | Nuclear hormone receptor, ligand-binding, core | SMART | SM00430 | HOLI | coord: 108..297 e-value: 1.8E-8 score: 44.2 |
IPR000536 | Nuclear hormone receptor, ligand-binding, core | PFAM | PF00104 | Hormone_recep | coord: 177..303 e-value: 5.9E-11 score: 41.7 |
IPR013088 | Zinc finger, NHR/GATA-type | GENE3D | 3.30.50.10 | | coord: 17..53 e-value: 1.5E-11 score: 44.3 |
IPR008946 | Nuclear hormone receptor, ligand-binding | GENE3D | 1.10.565.10 | | coord: 54..94 e-value: 3.2E-15 score: 55.7 |
IPR008946 | Nuclear hormone receptor, ligand-binding | GENE3D | 1.10.565.10 | | coord: 186..306 e-value: 7.0E-23 score: 80.5 |
IPR008946 | Nuclear hormone receptor, ligand-binding | SUPERFAMILY | 48508 | Nuclear receptor ligand-binding domain | coord: 102..306 |
None | No IPR available | PANTHER | PTHR24082 | NUCLEAR HORMONE RECEPTOR | coord: 18..303 |
None | No IPR available | PANTHER | PTHR24082:SF19 | NUCLEAR HORMONE RECEPTOR | coord: 18..303 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..18 score: 0.555 |
None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 17..81 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000003771 ID=EMLSAP00000003771|Name=EMLSAP00000003771|organism=Lepeophtheirus salmonis|type=polypeptide|length=610bp MKRILSLMCLCIFHSFQGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQ YCRLKKCIASGMSRDAVRFGRVPKREKAKIFSAMQSSRMKTQEANVLSEM SDDXKIIEEIVRAHYDNXDYTKNKMEPFLAKAKENPVYVPCTGMVSQGMT KGGIFKNNNIFHRHLPSLYNVSCVYLKVQTNNFFSPLQSLVCLNGDIIRK ETINQLAAGNAKFLMDSVFELAQRLNQFNLSDAEIGIFCSVVIITPDRPG LRNPELVQKIQNKLKNILNNILIPQHSDSPGIFSELLSMVHDLRTLNTLH TEKFLKQCKIDRSDMGGSSEGSTLQKHLLHGSKGQLYPHQHHWNGGSHSQ LDRESLGGVSSSESGCSSEVSRLTVLDLKVNNSVLLNALSLGSRFRLPSE VAESEFNNYQHPCHQTSSPPSSGGCNXNTAANAKNHIINNNNDHHYPNNN ASTHHQIQTPSSANPLVVASSKCPFKTSKLDSPSDSGIDSPKNQGTSICS SPRSFVEEDKHLHKDEEENETLVVESSPPPQPQSSHVSEEXHPLLKRALQ QPPQAYNGVPPLTSNAISYFQDEVYKPHKKFRRYNLSNSTAVPRIYLHHG GPLGNEDCYP back to top
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