EMLSAP00000004485, EMLSAP00000004485 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004485
Unique NameEMLSAP00000004485
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length314
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..308
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 2..283
IPR020479Homeodomain, metazoaPRINTSPR00024HOMEOBOXcoord: 262..272
score: 66.63
coord: 247..258
score: 47.42
coord: 272..281
score: 80.72
IPR001356Homeobox domainSMARTSM00389HOXcoord: 225..287
e-value: 3.0E-24
score: 96.6
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 226..282
e-value: 6.1E-21
score: 73.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 223..283
score: 21.038
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 224..283
e-value: 2.5E-27
score: 94.3
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 206..282
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 258..281
IPR001827Homeobox protein, antennapedia type, conserved sitePROSITEPS00032ANTENNAPEDIAcoord: 205..210

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004485 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004485EMLSAT00000004485-700332Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004485 ID=EMLSAP00000004485|Name=EMLSAP00000004485|organism=Lepeophtheirus salmonis|type=polypeptide|length=314bp
MMNTYFEQSGFYGQAAGGPDQAYRFPLGLAGMGXSPYAQHQPPRPTPPQE
SYDGGTASAPGPGGASPKALYSPLGSGGGGSSDPAPTSSYVKSSSTSSGS
NNNSDCSAIVSSGGASNPGGSGGKDGTPNNGYGGLKEANWATSGSTPVRP
SACTPDMSRYTPSAADAAAARDRWMNSCSSLSSAASQVAASQPQLQQAAS
ANHTFYPWMAIAGGTHLFTGANGLRRRGRQTYTRYQTLELEKEFHTNHYL
TRRRRIEMAHQLCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAV
KQQQQIVHHHDDGR
back to top
Add to Basket