EMLSAP00000004498, EMLSAP00000004498 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004498
Unique NameEMLSAP00000004498
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length243
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..231
NoneNo IPR availableCOILSCoilCoilcoord: 210..227
NoneNo IPR availablePANTHERPTHR11588:SF41SUBFAMILY NOT NAMEDcoord: 1..238
IPR002452Alpha tubulinPRINTSPR01162ALPHATUBULINcoord: 12..24
score: 81.25
coord: 72..87
score: 85.61
coord: 119..140
score: 87.43
coord: 145..158
score: 86.13
coord: 214..230
score: 82.45
IPR018316Tubulin/FtsZ, 2-layer sandwich domainSMARTSM00865Tubulin_Ccoord: 46..185
e-value: 4.5E-38
score: 142.5
IPR018316Tubulin/FtsZ, 2-layer sandwich domainPFAMPF03953Tubulin_Ccoord: 61..158
e-value: 2.7E-41
score: 140.4
IPR018316Tubulin/FtsZ, 2-layer sandwich domainGENE3D3.30.1330.20coord: 64..158
e-value: 2.3E-46
score: 156.0
IPR023123Tubulin, C-terminalGENE3D1.10.287.600coord: 176..231
e-value: 2.6E-28
score: 97.1
IPR003008Tubulin/FtsZ, GTPase domainGENE3D3.40.50.1440coord: 1..63
e-value: 4.5E-27
score: 94.6
IPR003008Tubulin/FtsZ, GTPase domainSUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1..43
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 1..238
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 44..230

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004498 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004498EMLSAT00000004498-700345Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004498 ID=EMLSAP00000004498|Name=EMLSAP00000004498|organism=Lepeophtheirus salmonis|type=polypeptide|length=243bp
MVDNEAIYDICRRNIDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL
TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPANQM
VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFK
VGINYQPLLLFLEETWLRYPELYASIAEAWARLDHKFDLXYAKRAFVHWY
VGEGMEEGEFSEAREDLAALEKDYEEXGMDSLEGEEEEDGQEY
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