EMLSAP00000004784, EMLSAP00000004784 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004784
Unique NameEMLSAP00000004784
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length767
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin, type IIISMARTSM00060FN3coord: 152..245
e-value: 9.3E-10
score: 48.4
coord: 40..136
e-value: 1.3E-8
score: 44.7
coord: 533..624
e-value: 33.0
score: 7.0
coord: 438..518
e-value: 1.9E-12
score: 57.4
IPR003961Fibronectin, type IIIPFAMPF00041fn3coord: 44..137
e-value: 7.3E-11
score: 41.9
coord: 154..247
e-value: 1.0E-11
score: 44.6
coord: 439..520
e-value: 2.4E-14
score: 53.1
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 438..528
score: 20.355
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 151..256
score: 16.465
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 40..147
score: 16.421
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 533..633
score: 7.51
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 257..334
score: 6.263
IPR003961Fibronectin, type IIISUPERFAMILY49265Fibronectin type IIIcoord: 39..260
IPR003961Fibronectin, type IIISUPERFAMILY49265Fibronectin type IIIcoord: 436..613
IPR003599Immunoglobulin subtypeSMARTSM00409IGcoord: 347..430
e-value: 8.8E-7
score: 38.5
IPR003598Immunoglobulin subtype 2SMARTSM00408IGc2coord: 353..419
e-value: 1.4E-9
score: 47.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 347..438
e-value: 1.8E-18
score: 65.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 149..264
e-value: 2.9E-21
score: 75.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 439..529
e-value: 1.2E-19
score: 69.9
coord: 530..611
e-value: 1.1E-6
score: 28.1
coord: 41..148
e-value: 7.0E-20
score: 70.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3..40
e-value: 7.6E-9
score: 34.9
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 346..429
e-value: 6.3E-16
score: 57.8
NoneNo IPR availablePANTHERPTHR10489CELL ADHESION MOLECULEcoord: 1..612
NoneNo IPR availablePANTHERPTHR10489:SF462SUBFAMILY NOT NAMEDcoord: 1..612
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 3..47
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 340..431
NoneNo IPR availableTMHMMTMhelixcoord: 634..656
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 340..430
score: 11.279

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004784 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004784EMLSAT00000004784-700631Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004784 ID=EMLSAP00000004784|Name=EMLSAP00000004784|organism=Lepeophtheirus salmonis|type=polypeptide|length=767bp
MTSKLLIHNLHRDDSALFQCFASNQFGKAVRSIRLVVQEPPEVPNNPHIV
SFSSRNANISWSKPYDGRSQITAYIIEYKMEKGTTYFLRFISLSESWREA
SKHIVSGTSNWAELQSLAPSHAYEIRMSAENGVGVSGKTPILKLRAKEEI
PEGPPTGIRAIANGSQSIIVTWRAPHPELRHGVILGYYLGYKVRNSSEPF
RYQTLEMKHRHERRRKESLELILYHLKKYTEYSIVVQAYNGVGAGPRNPE
IHIRTDEDVPSSPPSNDYRVFYRPLREWEDNPLVRDLRTSGLKITLYDLD
KYQNYTIQNQPYSFWVTCSTIEGQGLESEIVTETPSLPIPASIASFSQSM
FGAINEEIFFPCISIGKPKPSISWTFNGEDLRPSSRILVDQTRDNSLWIT
ALELSDSGNYSCMVKNHFGSDSILIYLTVKKSRNNGVPPAPPTLSVVQTT
PSSITLGWXPSADGGSPLLGYRIHHHREFGDWDRTDINPLNNSFTLKNLR
CGTHYQFYIQGVNDFGVGERTETVSARTRGTSPIAPFNEDFISVNSTSIV
LKLDAWRMGGCPISSFVVEYRKSEKLLQDSSTSWILVNNNVKMTEDRTFA
VLDLSPQTAYSLPTIAPKLMIHSGYGGIGFLLSPGFLFSFFSVILLAVII
GVIVRLKWPLFQRSRGSDPNNIMPQHLCSNNESDKQIILPQSISEETRNI
QNEYLLDGFCPPSKSYGTLGRKKTYGKPIILQHHHHHVHHPGNFYSEDSN
IDPVEDSELEATALYPG
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