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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR006615 | Peptidase C19, ubiquitin-specific peptidase, DUSP domain | SMART | SM00695 | DUSP | coord: 389..549
e-value: 8.3E-13
score: 58.5 |
| IPR006615 | Peptidase C19, ubiquitin-specific peptidase, DUSP domain | PFAM | PF06337 | DUSP | coord: 394..546
e-value: 3.9E-19
score: 68.7 |
| IPR006615 | Peptidase C19, ubiquitin-specific peptidase, DUSP domain | PROSITE | PS51283 | DUSP | coord: 369..546
score: 15.447 |
| IPR002048 | EF-hand domain | SMART | SM00054 | EFh | coord: 242..270
e-value: 26.0
score: 6.4
coord: 278..306
e-value: 0.34
score: 20.0 |
| IPR002048 | EF-hand domain | PROSITE | PS50222 | EF_HAND_2 | coord: 246..273
score: 8.572 |
| IPR002048 | EF-hand domain | PROSITE | PS50222 | EF_HAND_2 | coord: 274..309
score: 11.919 |
| IPR011992 | EF-hand domain pair | GENE3D | 1.10.238.10 | | coord: 16..179
e-value: 6.2E-13
score: 47.9 |
| IPR011992 | EF-hand domain pair | GENE3D | 1.10.238.10 | | coord: 188..317
e-value: 4.2E-28
score: 97.4 |
| IPR011992 | EF-hand domain pair | PFAM | PF13499 | EF-hand_7 | coord: 246..303
e-value: 1.4E-8
score: 34.6 |
| IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | PFAM | PF00443 | UCH | coord: 705..1246
e-value: 2.2E-36
score: 125.2
coord: 1266..1452
e-value: 1.1E-18
score: 67.2 |
| None | No IPR available | GENE3D | 3.30.2230.10 | | coord: 358..426
e-value: 5.3E-32
score: 109.6
coord: 481..558
e-value: 5.3E-32
score: 109.6 |
| None | No IPR available | PANTHER | PTHR24006:SF28 | SUBFAMILY NOT NAMED | coord: 274..1487 |
| None | No IPR available | PANTHER | PTHR24006 | FAMILY NOT NAMED | coord: 274..1487 |
| None | No IPR available | SUPERFAMILY | 47473 | EF-hand | coord: 188..341 |
| None | No IPR available | SUPERFAMILY | 54001 | Cysteine proteinases | coord: 1200..1308
coord: 1398..1454
coord: 702..885 |
| None | No IPR available | SUPERFAMILY | 47473 | EF-hand | coord: 16..173 |
| None | No IPR available | SUPERFAMILY | 143791 | DUSP-like | coord: 374..411
coord: 466..534 |
| IPR018200 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase, conserved site | PROSITE | PS00972 | UCH_2_1 | coord: 707..722 |
| IPR018247 | EF-Hand 1, calcium-binding site | PROSITE | PS00018 | EF_HAND_1 | coord: 251..263 |
| IPR018247 | EF-Hand 1, calcium-binding site | PROSITE | PS00018 | EF_HAND_1 | coord: 287..299 |
| IPR000626 | Ubiquitin domain | PROSITE | PS50053 | UBIQUITIN_2 | coord: 608..674
score: 8.873 |
| IPR028889 | Ubiquitin carboxyl-terminal hydrolase-like domain | PROSITE | PS50235 | UCH_2_3 | coord: 706..1456
score: 27.088 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000004919 ID=EMLSAP00000004919|Name=EMLSAP00000004919|organism=Lepeophtheirus salmonis|type=polypeptide|length=1491bp
MGGKESKQFPLSSEEALKRVTEGEKRRLQDAFRRLSSRSNVSGLISKYNF
VMDVLGDIVPSKLADRIYTLAVWSSSSSANAKGLNFREILSLLVLITRGT
REEKIKMMFGLLTSSNGVCIEKSEMFRLVREWERDCLPHELQHLFAESEK
VSYDRFLIWVENYPDCLGLSKWLLTPTDHFSLVNKLDTPTFYQTLAGXTH
LDEEEIVELEKRFWTLTGSSHSGQIDLNLVKNIVSPPLPDDLAAPFFHAL
DENEDGHIDLKELSCGVSXACRGPELERQKFVFKMFDLNRDGVLNEDEFN
SMITLVNEVYLQLNKNDGNSFVTKNYGKGTHLTLQEFLVWTTSCESGHMK
EFSKLLYQLCHVCLGLKPLTRSNEGDIVRGWIEREEKLPHSSGSIWNLVS
MNWWSNWHSYVNFHPHLTPKLLNKSKKLNAVASNHSQGVVATGYSSISDI
NSGSTTSLSSLSSKKSIDESNITSSANALPRPGHIDNSNLTIPSPYRISS
LTGEGARLKPKIQQGKDFELVPKRLWEALILWYGDAGVMSLPRQTILNSN
GVFEVELYPIAVKIMKHQVVPRPPQIPTVVGGYSAAAIHAAGNLPTTTRR
YIANQAVFSRRTTINQISDFLSSRLVIKMEDMRLWFYRDDLNMKQLSENE
CRTLEDLGFRDDDGILVEVRSRDGTWPEEISSLMSGGNKNNFNNNNNNIS
GIKGVTGLNNLGNTCYMNAAIQCVAHTQILYKYFNNNCHLFELNRTNPLG
MKGHIAKRFGDLVRDMWSGEARTIAPIKLRWTIGRYRQHFSGFQQQDSQE
LLAFLLDGLHEDLNRVTEKSYFELKDSDGRPDDEVAAEAWESHSARNKSI
IVDLFHXXXXXXXXHESVRXDPFTYLSLPLPMESSVHIEVIVIRQNGSIP
TKYGLTLDMDSKYTAIRNHLTKLCRIPAENLILVDVPPSEEQKVKNMNGT
CIFAYEFKARPESKLSHVTTTGNTQTFSDIQRSRCTQANDRLNEGANGHV
KGIEEKSKQEIQLEGNGSIKSNSVFPLDLSKDLGDXQRGIIVGLNRKMIP
QESYFLSTQKYQPVLFGLPLIINCDEKTSYQDLYKSVWTQVSRLVSPLPP
RETTTQNHALDCDDSLKYEYPFVLKVVQKGGSWCHWCPWHRFCRGCVIPC
NTKEYSFASSFIAIDWDQTALHLRYRSTQEKVYDEDYSVQESLKRATEPI
TLGKCLQAFTREEQLGSEEKYYCSICETHQLAAKKLQIWKLPPILVRILY
LEYHLDRGLFIHILQIVHLKRFHYLNGRWIKSHKIVEFPSKEFEPLDYLA
AVPSMTLKRFKHLKLSNSTPDSPLQTLQCNGNLSGSGSIDYDDDDVFETT
DEPQNTTVYNRRTRQESTSLNMLPVIDDNLRDFHQHRLMDGSEPLDIKYN
MYGMVCHSGVLGGGHYTSYTKHSNKWYLNNDSTCKEVQESQIDKSSAYML
FYERESLSSENYLPKISGPLPSTQDLDDELDIDFKKQCSLM back to top
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