EMLSAP00000005061, EMLSAP00000005061 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005061
Unique NameEMLSAP00000005061
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length362
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001760OpsinPRINTSPR00238OPSINcoord: 181..193
score: 33.77
coord: 65..77
score: 43.34
coord: 304..316
score: 38.09
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 209..232
score: 20.5
coord: 307..333
score: 26.65
coord: 123..145
score: 29.19
coord: 269..293
score: 18.77
coord: 44..68
score: 23.48
coord: 158..179
score: 25.01
coord: 77..98
score: 33.63
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 59..325
e-value: 7.4E-49
score: 166.0
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 129..145
IPR000856Opsin RH3/RH4PRINTSPR00577OPSINRH3RH4coord: 198..212
score: 25.0
coord: 221..238
score: 38.19
coord: 333..351
score: 35.53
coord: 256..270
score: 65.83
NoneNo IPR availableGENE3D1.20.1070.10coord: 28..355
e-value: 3.2E-71
score: 239.2
NoneNo IPR availablePANTHERPTHR24240:SF11OPSINcoord: 8..352
NoneNo IPR availablePANTHERPTHR24240OPSINcoord: 8..352
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 26..344
NoneNo IPR availableTMHMMTMhelixcoord: 277..296
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
IPR027430Visual pigments (opsins) retinal binding sitePROSITEPS00238OPSINcoord: 309..325
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 59..325
score: 37.242

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005061 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005061EMLSAT00000005061-700908Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005061 ID=EMLSAP00000005061|Name=EMLSAP00000005061|organism=Lepeophtheirus salmonis|type=polypeptide|length=362bp
MDDVYYNQYPPGMKMTDGIPEELREVIHSHWDQFSPANPLIAHFFGVMFF
FLWVMNFVGNGLVIFIFSKVKSLRTPSNMFVINLALSDLLMMTTMGPAVT
VNVFMQRYWAWGVFGCKLYGCIGAICGVVSILTMVVIGYDRYNVIVKGLN
GFRISVGKALAIILVIWAYSIAISALALFDIWGGYTVEGLLFTCSYDYLT
DDANNTTYILFTFFFMYVLPMSLVFFFYSSIVKAVWAHEMALKQQAKKMN
VESLRTNVDSNAESAEIRIAKVAVTNVSLWAGIWTPXXLVVLXAVMGSRS
SITPLVSQLPSFIAKTASCLNPMVYAMSHPKYREALMKEVPCLGIEEESM
QETVTTKEPVKA
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