EMLSAP00000005417, EMLSAP00000005417 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005417
Unique NameEMLSAP00000005417
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length811
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 712..723
score: 47.4
coord: 731..742
score: 33.18
coord: 644..657
score: 45.66
NoneNo IPR availableGENE3D2.20.100.10coord: 428..472
e-value: 3.1E-11
score: 42.8
coord: 644..690
e-value: 7.9E-9
score: 35.1
coord: 692..747
e-value: 8.4E-16
score: 57.4
coord: 370..425
e-value: 5.7E-17
score: 61.2
coord: 261..311
e-value: 5.6E-11
score: 42.0
coord: 313..368
e-value: 8.0E-18
score: 63.9
coord: 588..640
e-value: 1.7E-15
score: 56.5
coord: 534..584
e-value: 4.1E-12
score: 45.7
coord: 751..807
e-value: 4.3E-15
score: 55.2
NoneNo IPR availablePANTHERPTHR19897:SF72HEMICENTIN-1coord: 259..809
NoneNo IPR availablePANTHERPTHR19897COILED-COIL DOMAIN-CONTAINING PROTEINcoord: 259..809
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.81
IPR000884Thrombospondin, type 1 repeatSMARTSM00209TSP1coord: 591..641
e-value: 2.7E-12
score: 56.8
coord: 646..691
e-value: 1.4E-6
score: 37.8
coord: 317..369
e-value: 9.2E-12
score: 55.1
coord: 696..748
e-value: 1.0E-8
score: 45.0
coord: 755..808
e-value: 5.6E-10
score: 49.1
coord: 262..312
e-value: 1.8E-9
score: 47.5
coord: 374..426
e-value: 1.2E-12
score: 58.0
coord: 536..586
e-value: 5.8E-11
score: 52.4
coord: 431..479
e-value: 2.1E-5
score: 34.0
IPR000884Thrombospondin, type 1 repeatPFAMPF00090TSP_1coord: 375..425
e-value: 1.6E-10
score: 40.8
coord: 432..470
e-value: 5.3E-10
score: 39.1
coord: 319..368
e-value: 4.4E-10
score: 39.4
coord: 592..640
e-value: 2.8E-9
score: 36.8
coord: 698..747
e-value: 3.6E-9
score: 36.4
coord: 757..807
e-value: 7.8E-9
score: 35.4
coord: 648..690
e-value: 2.8E-6
score: 27.2
coord: 538..585
e-value: 7.9E-10
score: 38.5
coord: 263..311
e-value: 3.9E-8
score: 33.1
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 428..475
score: 10.344
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 533..586
score: 11.571
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 643..691
score: 11.118
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 693..748
score: 12.5
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 588..641
score: 12.861
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 314..369
score: 11.743
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 752..808
score: 12.332
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 259..312
score: 12.309
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 371..426
score: 13.203
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 644..686
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 370..422
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 313..364
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 261..311
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 692..743
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 751..801
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 585..640
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 425..470
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 534..580
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 136..163
e-value: 14.0
score: 14.4
coord: 67..102
e-value: 14.0
score: 14.3
coord: 164..195
e-value: 7.3E-4
score: 28.8
coord: 103..133
e-value: 0.32
score: 20.1
coord: 198..228
e-value: 25.0
score: 11.5
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 128..163
score: 7.183
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 195..228
score: 9.762
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 69..102
score: 7.781
IPR013032EGF-like, conserved sitePFAMPF12661hEGFcoord: 215..227
e-value: 0.0078
score: 16.1
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 90..101
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 216..227
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 121..132
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 151..162
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 183..194

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005417 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005417EMLSAT00000005417-701264Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005417 ID=EMLSAP00000005417|Name=EMLSAP00000005417|organism=Lepeophtheirus salmonis|type=polypeptide|length=811bp
MRNFIVWISLVALSILPYIKATGRITPLSRPGATACLAENLRLTDRYICD
SEGNVICVDGWSYPSKLCSEPICDMNGRGXNGKCIHPNVCACEVGWDGPN
CDECIPLGGCKHGSCNKPMECNCRPGWTGGQCNKPKCDGCVNGXCHEPYK
CICDFGWKGPNCTECTTLSNCKNGHCITHPFQCECIDGWTGLDCSKPICR
DSCHPVNGYCXSPGECICRNGWTGRDCNECVPYPGCKGTCVNNVPWTCTD
IDTIPPGNTDEWSAWGRWSTCSRTCGDGTQIRARTCADHNGVSGNCRGSS
TESRRCSISNCKIDGHWAEWTRWAPCSASCGTGSKTRFRSCSNPIPRYGG
KPCAGLDRENLKCFTKHCAIDGKWSSWQSWGQCSASCGNGHRXRARECNS
PSPAHGGLSCFGNSVDNQVCNVRECPIDASWSLWTQWTSCTKTCGEGRRE
RQRNCDGALFGGRPCTGNSTVERDMDIGLHGPSGQHVVLHVVLEIDRGEE
IVTTLLPNLEAEDVLELTLKMDHAVQIKIAQLMGXWNAWNQWTTCSATCN
GGTQTRGRTCIEPQFGGKSCSGSSNDDRACGAIKCPIDASWSIWTSWSTC
TKTCGGGSRRRSRTCTPAQNGGQPCIGTATDESTCNTQECIVIGSWAQWG
RWSTCSKSCDGGSRSRSRPCSNNNCXGNGSENGRCNAKPCGVDGMWGQWQ
FWGSCSVSCGNGVQSRRRQCDSPRPSSGGRNCRGSSVESNTCIKPSCIQV
IDGNWGQWIQWSGCSATCGHATRSRSRQCDSPSPMNGGSFCSGDNNQISS
CPNTRPCPIGM
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