EMLSAP00000006302, EMLSAP00000006302 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000006302
Unique NameEMLSAP00000006302
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1094
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020479Homeodomain, metazoaPRINTSPR00024HOMEOBOXcoord: 245..255
score: 59.63
coord: 230..241
score: 46.11
coord: 255..264
score: 80.31
IPR000175Sodium:neurotransmitter symporterPRINTSPR00176NANEUSMPORTcoord: 555..574
score: 44.34
coord: 986..1006
score: 24.28
coord: 947..967
score: 29.66
coord: 861..880
score: 31.56
coord: 598..624
score: 21.25
IPR000175Sodium:neurotransmitter symporterPFAMPF00209SNFcoord: 520..1009
e-value: 7.3E-48
score: 163.2
IPR000175Sodium:neurotransmitter symporterPROSITEPS50267NA_NEUROTRAN_SYMP_3coord: 517..1005
score: 31.93
IPR001356Homeobox domainSMARTSM00389HOXcoord: 208..270
e-value: 5.3E-24
score: 95.7
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 209..265
e-value: 3.0E-21
score: 74.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 206..266
score: 20.293
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 206..266
e-value: 8.4E-29
score: 99.0
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 202..271
NoneNo IPR availablePANTHERPTHR24327FAMILY NOT NAMEDcoord: 201..287
NoneNo IPR availableSUPERFAMILY161070SNF-likecoord: 678..1035
coord: 520..647
NoneNo IPR availableTMHMMTMhelixcoord: 554..576
NoneNo IPR availableTMHMMTMhelixcoord: 865..887
NoneNo IPR availableTMHMMTMhelixcoord: 812..834
NoneNo IPR availableTMHMMTMhelixcoord: 915..937
NoneNo IPR availableTMHMMTMhelixcoord: 705..723
NoneNo IPR availableTMHMMTMhelixcoord: 1018..1040
NoneNo IPR availableTMHMMTMhelixcoord: 589..611
NoneNo IPR availableTMHMMTMhelixcoord: 774..796
NoneNo IPR availableTMHMMTMhelixcoord: 732..754
NoneNo IPR availableTMHMMTMhelixcoord: 941..963
NoneNo IPR availableTMHMMTMhelixcoord: 984..1003
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 241..264

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000006302 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000006302EMLSAT00000006302-702149Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000006302 ID=EMLSAP00000006302|Name=EMLSAP00000006302|organism=Lepeophtheirus salmonis|type=polypeptide|length=1094bp
MSLKPLKDLKPSSKDASSTSSSSSTHQSKNNPSSPERNSPTSTSGGDAHL
LPQGFRSHSSFLIEDILFQRPKLIADLANRSSESSELSKEAPNSSSCSLS
ASGFSKYINDYNQLAAYLSPMGLAAAAXQASAAAGILQQSILHHKHHSPS
GNNNASPTTNSTPPFFLSSSTYYLQGYIKFLSHEYCLILLDLPFSSLFTT
ESGKQCRRRKARTVFSDHQLCGLERRFEAQRYLSTPERVELATALSLSET
QVKTWFQNRRMKHKKYIRKQSELPSSQMIEGNSGSTPIILICSYFFIFVT
HDDLEVKNCDLLEVSPLRGKEGFIISWKMSNDDEGLRPLGQMEENESTLR
DALPMSPLFEKMPPLSRFRCLSDGEDRYSYFSTLPPKQXPEAYSTSSSFQ
YAKGTPKRASSSDRLLSRSLALTSTYTSFDEITLEVEKEACTLPVETSEL
QPSSTLDRKIFPNKYVGSLDSGLGGSSTLQSAPSNSESIFGKSFDDYPMR
TPLGIPDWNDQIYESGNVIQWSNRYDFVIIGLLLGCTLRTLIELPLMALQ
NGGWIFLVIYGLFLVIVGIPLSFLLSALGQYSQRGLVHAWKIVPFFIGIG
SILLCLFFVSAVLDSAVASYALLYVLGSFLKELPWTMCDGDWNNIKDCDR
FDHVRSVSVMSESCIAPESNCTSRSEIHSTALLFWEKFNGFSLESGREVY
YEPRWETFASAGFVWLVIWLISIKNFEFVRKVLYSIVIFFILAFTTYFIR
MSVMEGTGHWNYFGFDYEKCLDYHFWARAAGLAIRTSFASGLPLFLGSRN
FTFYKVHYQTVLLQFLLYLMGILSTLAFCALFAVNKNLVHLKELDYISFT
FVVPSEAFRGAPMNRLWSLLFFALIFSGQLGSVLLFLEGIYTTLEDVGFA
LESKLNYSLKRFIKCTFISICGLICTLVFSTSLGLALYHTIIEYFFGITE
VFIALLTIVSISYIYGLRLWSNALHYMLKTECRIFYSSWLVICPLVILYV
LIVRLSDLKLDNSMELVIAAVQSLLILQIPICAFCKFFYSGINCSRELFV
PSSDWGLRSKRIPXGSMHXTLLLSKRSDKFSRREDIKSNPYSYY
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