EMLSAP00000010070, EMLSAP00000010070 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010070
Unique NameEMLSAP00000010070
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length613
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin, type 1 repeatSMARTSM00209TSP1coord: 485..552
e-value: 0.053
score: 20.6
coord: 559..604
e-value: 0.044
score: 21.3
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 482..552
score: 9.27
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 558..597
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 341..371
e-value: 120.0
score: 3.5
coord: 82..112
e-value: 45.0
score: 8.6
coord: 406..436
e-value: 150.0
score: 2.7
coord: 115..144
e-value: 1.4
score: 17.9
coord: 48..79
e-value: 0.15
score: 21.2
coord: 242..273
e-value: 0.0056
score: 25.9
coord: 372..403
e-value: 1.2
score: 18.1
coord: 437..468
e-value: 0.055
score: 22.6
coord: 276..306
e-value: 57.0
score: 7.4
coord: 307..338
e-value: 0.0051
score: 26.0
coord: 212..241
e-value: 37.0
score: 9.4
coord: 15..47
e-value: 6.9
score: 15.6
coord: 145..176
e-value: 0.03
score: 23.5
coord: 179..209
e-value: 30.0
score: 10.6
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 79..112
score: 7.981
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 176..209
score: 9.021
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 273..306
score: 10.054
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1..17
score: 7.486
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 310..338
score: 7.53
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 434..468
score: 6.834
IPR001881EGF-like calcium-binding domainSMARTSM00179EGF_CAcoord: 304..338
e-value: 0.38
score: 5.2
coord: 42..79
e-value: 0.98
score: 1.9
coord: 239..273
e-value: 0.14
score: 8.6
coord: 142..176
e-value: 0.37
score: 5.3
NoneNo IPR availableGENE3D2.170.300.10coord: 5..80
e-value: 1.2E-4
score: 21.4
coord: 87..211
e-value: 4.7E-4
score: 19.5
NoneNo IPR availablePANTHERPTHR24044FAMILY NOT NAMEDcoord: 3..468
IPR013032EGF-like, conserved sitePFAMPF12661hEGFcoord: 131..143
e-value: 0.0031
score: 17.3
coord: 196..208
e-value: 0.025
score: 14.5
coord: 34..46
e-value: 0.0074
score: 16.1
coord: 260..272
e-value: 0.033
score: 14.1
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 326..337
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 164..175
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 132..143
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 35..46
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 35..49
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 261..272
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 456..467
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 326..337
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 67..78
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 229..240
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 197..208
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 294..305
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 391..402
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 5..16
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 391..402
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 100..111
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 132..146
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 456..470
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 164..175
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 261..272
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 359..370
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 67..78
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 424..435
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 197..208
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 100..111
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 229..243
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 5..16
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 294..308

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010070 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010070EMLSAT00000010070-705917Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010070 ID=EMLSAP00000010070|Name=EMLSAP00000010070|organism=Lepeophtheirus salmonis|type=polypeptide|length=613bp
MPFECNCSEGWLGYNCDKAKCDFCKNGKCLEPNKCICNQGWEGDQCDQCV
KKPGCQNGYCQNSPHECKCREGWKGDLCNIPICLKECDPKFGFCDKPGEC
KCITGWTGPLCTMKECSVVCDLANSECEMGMCVCKEGWTGAKCDECIPKL
GCVNGECKDQPFECVCKDGYEGELCNNPICLEGCNPMYGSCNAPGECNCS
PGWTGPMCTKKECDQQCFLDNSECEMGVCVCHLGWIGPECNECIPKENCA
NGECKDRPFECVCKEGYEGELCDIPKCRQGCHPMFGSCDEPGECKCNIGW
TGPKCDECLPKENCANGZCKNEPFECVCNDGWXGELCNIPICREGCNRQL
GSCNAPGECNCMEGSTGVNCNECIKKPGCVNGECNGIPFGCVCNDGWDGD
LCDIPICSEGCNPKLGFCNAPGECNCIEGSTGVNCNECIKKPGCLNGECN
GIPFGCVCNDGWAGKFCEKCIKPWICTPSISHGEWSEWSHWSDCYSKSCY
STGHKFRRRLCTFNKTYHKVNPHYHHEVYSPKVKYCPGASLEKKPCSPDY
CQKKGHKFPFFWSEWTPCTAQCKGHKGVRYRTKVCHHKICDKKETQECIG
TVYKHSINGTLCY
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