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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000884 | Thrombospondin, type 1 repeat | SMART | SM00209 | TSP1 | coord: 485..552 e-value: 0.053 score: 20.6 coord: 559..604 e-value: 0.044 score: 21.3 |
IPR000884 | Thrombospondin, type 1 repeat | PROSITE | PS50092 | TSP1 | coord: 482..552 score: 9.27 |
IPR000884 | Thrombospondin, type 1 repeat | SUPERFAMILY | 82895 | TSP-1 type 1 repeat | coord: 558..597 |
IPR000742 | Epidermal growth factor-like domain | SMART | SM00181 | EGF | coord: 341..371 e-value: 120.0 score: 3.5 coord: 82..112 e-value: 45.0 score: 8.6 coord: 406..436 e-value: 150.0 score: 2.7 coord: 115..144 e-value: 1.4 score: 17.9 coord: 48..79 e-value: 0.15 score: 21.2 coord: 242..273 e-value: 0.0056 score: 25.9 coord: 372..403 e-value: 1.2 score: 18.1 coord: 437..468 e-value: 0.055 score: 22.6 coord: 276..306 e-value: 57.0 score: 7.4 coord: 307..338 e-value: 0.0051 score: 26.0 coord: 212..241 e-value: 37.0 score: 9.4 coord: 15..47 e-value: 6.9 score: 15.6 coord: 145..176 e-value: 0.03 score: 23.5 coord: 179..209 e-value: 30.0 score: 10.6 |
IPR000742 | Epidermal growth factor-like domain | PROSITE | PS50026 | EGF_3 | coord: 79..112 score: 7.981 |
IPR000742 | Epidermal growth factor-like domain | PROSITE | PS50026 | EGF_3 | coord: 176..209 score: 9.021 |
IPR000742 | Epidermal growth factor-like domain | PROSITE | PS50026 | EGF_3 | coord: 273..306 score: 10.054 |
IPR000742 | Epidermal growth factor-like domain | PROSITE | PS50026 | EGF_3 | coord: 1..17 score: 7.486 |
IPR000742 | Epidermal growth factor-like domain | PROSITE | PS50026 | EGF_3 | coord: 310..338 score: 7.53 |
IPR000742 | Epidermal growth factor-like domain | PROSITE | PS50026 | EGF_3 | coord: 434..468 score: 6.834 |
IPR001881 | EGF-like calcium-binding domain | SMART | SM00179 | EGF_CA | coord: 304..338 e-value: 0.38 score: 5.2 coord: 42..79 e-value: 0.98 score: 1.9 coord: 239..273 e-value: 0.14 score: 8.6 coord: 142..176 e-value: 0.37 score: 5.3 |
None | No IPR available | GENE3D | 2.170.300.10 | | coord: 5..80 e-value: 1.2E-4 score: 21.4 coord: 87..211 e-value: 4.7E-4 score: 19.5 |
None | No IPR available | PANTHER | PTHR24044 | FAMILY NOT NAMED | coord: 3..468 |
IPR013032 | EGF-like, conserved site | PFAM | PF12661 | hEGF | coord: 131..143 e-value: 0.0031 score: 17.3 coord: 196..208 e-value: 0.025 score: 14.5 coord: 34..46 e-value: 0.0074 score: 16.1 coord: 260..272 e-value: 0.033 score: 14.1 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 326..337 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 164..175 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 132..143 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 35..46 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 35..49 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 261..272 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 456..467 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 326..337 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 67..78 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 229..240 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 197..208 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 294..305 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 391..402 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 5..16 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 391..402 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 100..111 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 132..146 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 456..470 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 164..175 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 261..272 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 359..370 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 67..78 |
IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 424..435 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 197..208 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 100..111 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 229..243 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 5..16 |
IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 294..308 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000010070 ID=EMLSAP00000010070|Name=EMLSAP00000010070|organism=Lepeophtheirus salmonis|type=polypeptide|length=613bp MPFECNCSEGWLGYNCDKAKCDFCKNGKCLEPNKCICNQGWEGDQCDQCV KKPGCQNGYCQNSPHECKCREGWKGDLCNIPICLKECDPKFGFCDKPGEC KCITGWTGPLCTMKECSVVCDLANSECEMGMCVCKEGWTGAKCDECIPKL GCVNGECKDQPFECVCKDGYEGELCNNPICLEGCNPMYGSCNAPGECNCS PGWTGPMCTKKECDQQCFLDNSECEMGVCVCHLGWIGPECNECIPKENCA NGECKDRPFECVCKEGYEGELCDIPKCRQGCHPMFGSCDEPGECKCNIGW TGPKCDECLPKENCANGZCKNEPFECVCNDGWXGELCNIPICREGCNRQL GSCNAPGECNCMEGSTGVNCNECIKKPGCVNGECNGIPFGCVCNDGWDGD LCDIPICSEGCNPKLGFCNAPGECNCIEGSTGVNCNECIKKPGCLNGECN GIPFGCVCNDGWAGKFCEKCIKPWICTPSISHGEWSEWSHWSDCYSKSCY STGHKFRRRLCTFNKTYHKVNPHYHHEVYSPKVKYCPGASLEKKPCSPDY CQKKGHKFPFFWSEWTPCTAQCKGHKGVRYRTKVCHHKICDKKETQECIG TVYKHSINGTLCY back to top
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