EMLSAT00000010070, EMLSAT00000010070-705917 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010070
Unique NameEMLSAT00000010070-705917
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: reproduction, female reproduction, no eggstrings
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AS F384 female
  1. PreAdult2
 -Missing-
reproduction, female reproduction, no eggstrings 		21.08.2018 - 09:08
24.09.2018 - 09:08
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s663supercontigLSalAtl2s663:576123..579147 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010070 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010070EMLSAG00000010070-692836Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044764EMLSAE00000044764-753692Lepeophtheirus salmonisexon
EMLSAE00000044765EMLSAE00000044765-753693Lepeophtheirus salmonisexon
EMLSAE00000044766EMLSAE00000044766-753694Lepeophtheirus salmonisexon
EMLSAE00000044767EMLSAE00000044767-753695Lepeophtheirus salmonisexon
EMLSAE00000044768EMLSAE00000044768-753696Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778690auto778690Lepeophtheirus salmonispolypeptide
EMLSAP00000010070EMLSAP00000010070Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010070

>EMLSAP00000010070 ID=EMLSAP00000010070|Name=EMLSAP00000010070|organism=Lepeophtheirus salmonis|type=polypeptide|length=613bp
MPFECNCSEGWLGYNCDKAKCDFCKNGKCLEPNKCICNQGWEGDQCDQCV
KKPGCQNGYCQNSPHECKCREGWKGDLCNIPICLKECDPKFGFCDKPGEC
KCITGWTGPLCTMKECSVVCDLANSECEMGMCVCKEGWTGAKCDECIPKL
GCVNGECKDQPFECVCKDGYEGELCNNPICLEGCNPMYGSCNAPGECNCS
PGWTGPMCTKKECDQQCFLDNSECEMGVCVCHLGWIGPECNECIPKENCA
NGECKDRPFECVCKEGYEGELCDIPKCRQGCHPMFGSCDEPGECKCNIGW
TGPKCDECLPKENCANGZCKNEPFECVCNDGWXGELCNIPICREGCNRQL
GSCNAPGECNCMEGSTGVNCNECIKKPGCVNGECNGIPFGCVCNDGWDGD
LCDIPICSEGCNPKLGFCNAPGECNCIEGSTGVNCNECIKKPGCLNGECN
GIPFGCVCNDGWAGKFCEKCIKPWICTPSISHGEWSEWSHWSDCYSKSCY
STGHKFRRRLCTFNKTYHKVNPHYHHEVYSPKVKYCPGASLEKKPCSPDY
CQKKGHKFPFFWSEWTPCTAQCKGHKGVRYRTKVCHHKICDKKETQECIG
TVYKHSINGTLCY
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mRNA from alignment at LSalAtl2s663:576123..579147+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010070-705917 ID=EMLSAT00000010070-705917|Name=EMLSAT00000010070|organism=Lepeophtheirus salmonis|type=mRNA|length=3025bp|location=Sequence derived from alignment at LSalAtl2s663:576123..579147+ (Lepeophtheirus salmonis)
AAAAGCCCCTCTAAAGTTAATAAAATCATTAGTTTGCAAACTACTTAATA
TGAGGATAGTTTCAATAGTACTCATTGGATTAATTTTCATAGTCCAAGGT
TATTTCTGCTGGATTACTCCCCTAAATCTCAACAAAGCATGTCTCGCGGA
GGCACTTCGGGKAAATAATTATTTGGCTTAGGAATTTACATATGAAATAT
TGTACAGGAACTACATACTCTATCTACTGATTCAACATTAGCTCACAAAT
AAATACAAATGCGATTCAAAGGGAAACATCATCTGCTTGACGGGATGGTC
GAACCCGAAAGAATGGTGTAAAATCCCCATTTGCAATTTAGATGGATACT
CGTGCCAAAACGGGAATTGTATTTTACCGAATACATGTGCATGCCATGTA
GGTTGGGATGGTTCGATCTGTGATAAATGTATTCCAAGAGGAGGATGTCG
AAATGGAGATTGTGATATGCCTTTTGAATGTAATTGTTCCGAGGGCTGGC
TCGGATATAATTGTGATAAAGCAAAATGCGACTTTTGCAAGAATGGTAAA
TGTTTGGAGCCGAACAAGTGCATGTAATATATCAGTGCGTAATCACTACA
TGTTATAACTAGTAGAATATTATTACATTTTTAGATGTAATCAAGGATGG
GAGGGAGATCAATGCGATCAATGCGTCAAAAAACCAGGATGTCAAAATGG
ATATTGTCAAAACAGCCCACATGAATGCAAGTGTAGAGAAGGATGGAAAG
GAGATCTATGCAATATCCCTATTTGCCTAAAAGAATGTGATCCCAAATTT
GGATTCTGCGATAAGCCAGGGGAATGCAAATGTATTACTGGGTGGACAGG
CCCATTATGTACGATGAAAGAGTGTTCTGTTGTATGTGATTTGGCCAATA
GTGAATGTGAAATGGGTATGTGTGTCTGTAAAGAAGGATGGACTGGAGCT
AAATGCGATGAATGCATCCCAAAACTAGGCTGTGTTAACGGCGAGTGTAA
AGACCAGCCTTTTGAATGTGTCTGCAAAGATGGATATGAAGGAGAACTAT
GCAATAATCCTATATGTCTTGAAGGATGTAACCCAATGTATGGATCCTGC
AATGCTCCAGGAGAATGCAACTGCAGTCCAGGTTGGACTGGACCAATGTG
TACGAAAAAAGAGTGTGATCAACAATGTTTTTTGGATAATAGTGAATGCG
AAATGGGAGTTTGTGTTTGTCATTTGGGATGGATCGGACCTGAATGCAAT
GAATGCATCCCAAAAGAGAATTGTGCTAATGGCGAGTGTAAAGACAGACC
TTTTGAATGTGTTTGTAAAGAAGGATATGAAGGAGAACTATGCGATATTC
CTAAATGTCGTCAAGGATGTCATCCCATGTTTGGATCATGTGATGAGCCA
GGAGAATGCAAATGTAATATTGGATGGACCGGCCCTAAATGCGATGAATG
CCTCCCAAAAGAGAATTGTGCTAATGGTSAGTGTAAGAACGAGCCTTTTG
AATGTGTATGCAATGATGGATGGGWCGGAGAACTATGCAATATCCCTATT
TGCCGTGAAGGATGTAATCGCCAATTAGGATCCTGCAATGCTCCAGGAGA
GTGYAATTGTATGGAGGGATCGACCGGGGTTAATTGCAATGAATGYATCA
AAAAACCAGGATGCGTTAATGGCGAATGTAATGGGATTCCCTTTGGATGT
GTGTGTAATGATGGATGGGACGGAGATCTATGCGATATCCCTATTTGCAG
TGAAGGATGTAATCCCAAACTAGGATTCTGCAATGCTCCAGGAGAGTGCA
ATTGTATTGAAGGATCGACCGGGGTTAATTGCAATGAATGCATCAAAAAA
CCGGGATGTCTTAATGGTGAGTGTAACGGCATTCCCTTTGGATGTGTGTG
CAATGACGGATGGGCTGGTAAATTTTGTGAAAAATGCATAAAACCTTGGA
TATGTACTCCTTCAAGTAAAATTTTATTTATTTTGAACAATACCAAGTGT
CATTTCCCTATTCAATTTATATTTTAATAGTTTCTCATGGAGAGTGGTCC
GAATGGAGTCACTGGAGTGATTGTTATAGTAAAAGCTGTTATTCAACGGG
TCATAAATTTCGTAGAAGGTATACTCTGCTCTTGATTTAACAAATATTAA
CTATCACAAAATTCCCTTCTCCTTTAGGTTGTGCACATTTAATAAAACAT
ATCACAAAGTAAATCCACACTATCATCATGAAGTATATTCCCCTAAAGTA
AAATATTGTCCGGGAGCTAGCCTCGAAAAAAAGCCTTGTTCACCAGATTA
TTGTCAAAAAAAGGGTAACTATGTTATGGTTATAATCCCTAAATAACAAT
TTATGACACTTCTATTTCCAGGACATAAGTTTCCATTTTTTTGGTCAGAA
TGGACACCATGCACAGCACAATGTAAAGGGCACAAAGGAGTTAGGTATAG
AACAAAGGTTTGCCATCACAAGATATGTGACAAAAAAGAAACTCAGGAAT
GTATTGGAACAGTTTACAAACATTCAATTAACGGAACATTATGTTATTAA
TGAAAAAGCTCATAGGGAATTAACTAAATAAATAATTTTGCATACTAAAA
AGTATTAGACAGTCCTGTACTTTGTTAGCTCGTTAAAATTTATTTATATT
AGTATCATTTATGGGGAAAAGTTATTATAATACAAGGTCAAAAGTAAAGT
ATTTGAATATTTTTATCAAGACCAGTTGGAGTCCTCAAATTTTATTCGAG
TTGACTTTAAGACCAAGCTCCCAACCCTTTGAATATGTATGCATATATTA
TTAACATTTGCAAGAAGTATTGAGACAAAGGAATGAAAGCAAAATAACAA
TTTGAACTATATACTTAGCGAATAATAAAGCCTTTTGCTCAACTTAATTT
TATAMCCGCCTTATCTCATAGTCAAGTTGTGGTTCATTCCATCCATGGAG
TCAACGAGTAGTTTTGCCCTTATTAAATTAAATTTAATTAGGGCAAATAC
ATTTTGACCAATTGTGTATGTAGAG
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