EMLSAP00000010203, EMLSAP00000010203 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010203
Unique NameEMLSAP00000010203
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length390
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001523Paired domainPRINTSPR00027PAIREDBOXcoord: 9..24
score: 93.82
coord: 27..45
score: 74.69
coord: 65..82
score: 52.93
coord: 47..64
score: 79.34
IPR001523Paired domainSMARTSM00351PAXcoord: 5..130
e-value: 1.2E-82
score: 290.6
IPR001523Paired domainPFAMPF00292PAXcoord: 5..130
e-value: 2.0E-61
score: 205.1
IPR001523Paired domainPROSITEPS00034PAIRED_1coord: 39..55
IPR001523Paired domainPROSITEPS51057PAIRED_2coord: 5..132
score: 61.634
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 8..73
e-value: 1.1E-37
score: 127.2
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 74..132
e-value: 7.6E-27
score: 92.4
NoneNo IPR availablePANTHERPTHR24329FAMILY NOT NAMEDcoord: 1..347
NoneNo IPR availablePANTHERPTHR24329:SF179SUBFAMILY NOT NAMEDcoord: 1..347
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 7..133

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010203 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010203EMLSAT00000010203-706050Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010203 ID=EMLSAP00000010203|Name=EMLSAP00000010203|organism=Lepeophtheirus salmonis|type=polypeptide|length=390bp
MPHTGQAGVNQLGGVFVNGRPLPDYVRRRIVELAMMGVRPCDISRQLLVS
HGCVSKILTRFYETGSVKPGSIGGTRPKQVTTPSIVKRILRIKLENPGLF
AWEIRDQLISQRLCDPNNIPSISSINRILRNAGHLDDTPRIGQXSASSTS
SQISNISLNATPLTGKQAPHESNEATKITLDSNVKIIESSKEKIPTDIPQ
TSNIAAXVLSSFPHIWNRGALMSMYPYIWPGYPLDSSSLLSERYYNHVEQ
PNGIVAAAAAAAAAAVCAANVSNSGNRSLNHSRIQESKSNTTNPSFTSTI
FQNVTSTTSFGGNAQDMSEMNEPSSTTQEPSSSGSKKGSPSFHSIDEILN
KNFDKGSKKLKSSVIHVEEDEDTDNIIDPVCITSLKTSPI
back to top
Add to Basket