EMLSAP00000010238, EMLSAP00000010238 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010238
Unique NameEMLSAP00000010238
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1985
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1124..1132
NoneNo IPR availableCOILSCoilCoilcoord: 1103..1123
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 759..780
e-value: 1.7
score: 9.0
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 859..882
e-value: 9.6E-7
score: 28.6
coord: 887..911
e-value: 7.7E-7
score: 28.9
NoneNo IPR availablePANTHERPTHR11389ZINC FINGER PROTEINcoord: 333..1845
NoneNo IPR availablePANTHERPTHR11389:SF310ZINC FINGER PROTEINcoord: 333..1845
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 282..330
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 816..866
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 211..264
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 853..909
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 771..825
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 364..408
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 676..725
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 900..920
e-value: 120.0
score: 3.7
coord: 297..324
e-value: 93.0
score: 4.7
coord: 872..894
e-value: 0.029
score: 23.5
coord: 378..405
e-value: 26.0
score: 9.6
coord: 228..255
e-value: 190.0
score: 2.0
coord: 844..866
e-value: 0.011
score: 25.0
coord: 757..780
e-value: 0.48
score: 19.5
coord: 786..809
e-value: 5.4E-4
score: 29.3
coord: 816..838
e-value: 0.21
score: 20.7
coord: 124..146
e-value: 110.0
score: 4.2
coord: 32..56
e-value: 140.0
score: 3.1
IPR003656Zinc finger, BED-type predictedSMARTSM00614ZnF_BEDcoord: 673..721
e-value: 5.3E-6
score: 35.9
coord: 279..327
e-value: 3.0E-6
score: 36.8
coord: 361..408
e-value: 6.6E-13
score: 58.9
coord: 208..258
e-value: 0.0036
score: 26.0
IPR003656Zinc finger, BED-type predictedPFAMPF02892zf-BEDcoord: 213..256
e-value: 1.2E-6
score: 28.0
coord: 282..324
e-value: 4.6E-6
score: 26.1
coord: 364..406
e-value: 1.6E-9
score: 37.2
IPR003656Zinc finger, BED-type predictedPROSITEPS50808ZF_BEDcoord: 673..726
score: 10.968
IPR003656Zinc finger, BED-type predictedPROSITEPS50808ZF_BEDcoord: 279..331
score: 10.932
IPR003656Zinc finger, BED-type predictedPROSITEPS50808ZF_BEDcoord: 361..412
score: 11.709
IPR003656Zinc finger, BED-type predictedPROSITEPS50808ZF_BEDcoord: 208..262
score: 11.233
IPR013069BTB/POZPFAMPF00651BTBcoord: 490..558
e-value: 1.7E-7
score: 31.0
IPR011333BTB/POZ foldGENE3D3.30.710.10coord: 490..554
e-value: 3.4E-7
score: 29.6
IPR011333BTB/POZ foldSUPERFAMILY54695POZ domaincoord: 490..563
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 874..892
e-value: 5.5E-12
score: 44.8
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 893..919
e-value: 2.7E-8
score: 32.8
coord: 773..809
e-value: 7.8E-7
score: 28.1
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 843..873
e-value: 8.7E-11
score: 41.2
IPR007087Zinc finger, C2H2PFAMPF00096zf-C2H2coord: 786..809
e-value: 0.0013
score: 18.8
coord: 818..838
e-value: 0.038
score: 14.2
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 788..809
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 818..838
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 874..894
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 846..866
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 759..780
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 816..843
score: 12.653
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 872..899
score: 16.456
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 844..871
score: 15.189
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 757..785
score: 9.349
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 786..814
score: 12.466
IPR000210BTB/POZ-likePROSITEPS50097BTBcoord: 492..560
score: 13.364

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010238 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010238EMLSAT00000010238-706085Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010238 ID=EMLSAP00000010238|Name=EMLSAP00000010238|organism=Lepeophtheirus salmonis|type=polypeptide|length=1985bp
MDRDEQGTTFSLSAENEVGNFRRRGDSDDEEGFCLACDDSLTLTEEDMLR
HLVEKHPEAQNRSILTIHEGRGEKEDEDGDEGLDEETTVLIVAKSPDKEE
GDEEIVDEEGIQSYFKESESKDMMECRLCSVVIPSSDILKHIVEVHQQVE
IQDDMEEETANYIYQEESLFMDRKRAFPDEEDHQIFEEDEGEEGDFKRMR
LSDAKHKDTRSLTWQFFDKVKGGDTEEXRCHICDKRYHTAGGSTTVMHRH
LNKEHPEHLKEIKEDMLSDDPTKKCLKTTSRSVVWTYFIKAHSSNIVLCK
LCGRQYSSTDSSTGIMLRHLRKQHVKEYKEEILRREAEEESQETSRPTAL
PAKKPPRKTQSSRSSAWTYFTRIGPSSVKCNICSKDYSNIGGSTSAMIRH
LRKSHKDISIDDHMSTPSSSKMKSTIDLEGEDGKKDESLVDDDSSVFTVV
VKSSQEPVMEKSAMSNDVDKFSVSERILLEGIALEGKDFIYSDVQIICRE
GQVIRTHKLILASTSLFMYELLKNIPETEEDVIISAPDFSGDQLKDFLDR
IYIGGDTLTEGMLEIVNNFQFKMDFIDYPNRKMFSSESMKVYGQVDCQIV
DIPDVNVDDTLLYDSKSLNVNNSGVIPVQITSLGTVINDGNEEFSLNREV
TVKIEDTSMQVHDHTNAFAAHPKRKSAIWNYFLPTANCKESSSCIECKRV
VGCKQRSTSSMIKHLQRHHEDLFKKFCLENSKTSSLIKTPVMTKTITIDP
EKAILDKTCSICFKVFSTKNKMLIHHKAVHLRIKAYTCDICGKSYSRVDS
LKDHVASTHSLDVPSFLCKYCGKTFKRRATRFRHERFHRNDRRHQCSFCP
KKFFTSQTLRNHERTHTGEKPYECHECSRRFTMQHQLTTHLRVHTGDKPY
RCAYCNEAFKHSSSKNKHICLYMPREEAHSISAGINKRKPLSSALGPSML
EETTEVILPITTTEMIMKNNMSGISSSSSCSLPPWKKELLLRRNALAKTV
DPNASVIAELLESNEKKEPSPGSAHLKRPSSSQHEPAKKELLVVSSCRSR
ADSSILMVEKQVGGAIDRNVEKEVSSANCSKRRREEQSKSADAAEGEQEG
SSRQQQRARAKEEQEKAEEGAEXDMNLHERKGNDACHISREDRQFIFSPE
EERTREFLVPSSSPSSSPSLRVTKNISSSGVGRSYSKSGSSTRGKSLSTL
HPLLKRNKLSGCSIIDSELKSSSTSSFNSILSGMILAXPAIVVTDQEESL
ILMDKSRLPKASSSSLDSDDGTSSSTSSTEELRYGPGFVSRLKSRYMSAA
LRSTHFNNLRRTASLEDFLEKDEEEPPLLPRRTWLPRQSHINNPHQKKSS
SSTSHYIRSRDSMKRCKSVEVLSRNRLPADHPPPLPPKVTHRAALDLNAT
KALIPERVIVRDKKTKELPAQDIVKQTRKLFESKTSSSSPNSVVSAASSS
RVIVSSKQEETPPALPAKNVGKVLPSRIVERSEDPLKQHKTSSNLLKVGT
SFTNNASSSKNHLELPPKQIGVIRPITRSNNNTSNKNSDTSVSERNQKNK
IQEPEVLLVSDKTTKNVLSNNPAPSNVTTTSNNKPIANKFSLSSSSSSSS
NSGSRVSTKSSTIGSSGDSSQPKEMCEFKSIVLKEVKKELNNNHNNSSSC
NPKWSSSRGGSLTSSKEEQEEDVVDFTGGISSLQSIHSRYDAPTPVVATT
KQSEIHSVDKQSEDSGILGETGRLISDGVGGGSKSKHSQSLVESKNITFR
DSWKQRNEGKNTLVFNFINSKKDVSHIENDGLDFXXRKGKHCQSLFVLSR
PQSGVIILDSVISDESTDDDGTGIKLNSEDEDEEELRRPPSPCSIIFVGG
NIISGKSSLRSRASHKQSEKKVIVVAVVIEYSSSLEEVFEYPSFESSLSE
ETSQSKFGGSGGLGSYTPSKIQMXEAPFQLGXSRRPPSLSRGASESSSGN
ITSKKDGEVAGEDQVLRPVEDAVSWSGSFSSDILF
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