EMLSAP00000011964, EMLSAP00000011964 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011964
Unique NameEMLSAP00000011964
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length645
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000995Muscarinic acetylcholine receptor familyPRINTSPR00243MUSCARINICRcoord: 279..289
score: 34.39
coord: 595..613
score: 32.72
coord: 190..200
score: 53.75
coord: 163..171
score: 42.03
coord: 626..640
score: 27.54
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 605..631
score: 28.36
coord: 222..244
score: 23.67
coord: 258..279
score: 20.56
coord: 306..329
score: 23.55
coord: 142..166
score: 23.99
coord: 175..196
score: 30.3
coord: 568..592
score: 32.68
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 157..623
e-value: 2.2E-58
score: 197.2
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 228..244
NoneNo IPR availableGENE3D1.20.1070.10coord: 547..641
e-value: 3.8E-83
score: 278.4
coord: 122..342
e-value: 3.8E-83
score: 278.4
NoneNo IPR availablePANTHERPTHR24249:SF52MUSCARINIC ACETYLCHOLINE RECEPTOR-RELATEDcoord: 134..642
NoneNo IPR availablePANTHERPTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORcoord: 134..642
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 540..640
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 109..348
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 219..238
NoneNo IPR availableTMHMMTMhelixcoord: 307..329
NoneNo IPR availableTMHMMTMhelixcoord: 604..626
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 572..594
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 157..623
score: 35.878

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011964 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011964EMLSAT00000011964-707811Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011964 ID=EMLSAP00000011964|Name=EMLSAP00000011964|organism=Lepeophtheirus salmonis|type=polypeptide|length=645bp
MEENKSSLVLTIGENYITKWKLEKQKKRLCNTALGRDLPECFPSISIDDL
PIIRNRKKSSSFPFNQTELFTNLIEQYDQYVSSTTNPSSTPPLLPNDNNL
CLSFFGYNNSSELCRNYSLSKQSIPCGPECWPAPFGTALTVLIAIFLAIC
IVITTFGNLLVLVSFVVERQIRQPPNFFIASLAITDVLIGTVSMPFYTIY
VLVGYWPDELGPMLCDLWLSVDYTVCLVSQFTVLSITIDRFCSVKFATQY
RTWRTGNKIMAVVVTIWVVSALLFFVSIFGWEHFIGKRDLLPGECMVQFL
KDPLFNTSLIIGYYWIPLVILIVLYSFIFQTAWTLSKKTRGKEKERQKCL
NMARKPLAAPSEALKTKSNPTNVREVRPTVLHITPVTNNTVAKTTVEKKA
TEIVSPDRCRGEKCIGHAAPCNHRRKKPGPSISMESKSTQISPTSLVSMY
QHYARTTKLKNVKKSSSHNXKSPXPAVLHIVVEDQSLEHRKVVMSELDSI
KKINASPKQEQTESDHRLAKEERITTSQFLTVKGKRSKVIVLKTIRKKLR
FRRRKKDKNMIENRAKKALRMISIILGAFVACWTPYHVIAILASFYPTAV
NIHVYMISYFLCYANAQINPFCYAASNQQFKNAFKRIMKGDFSIK
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