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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000995 | Muscarinic acetylcholine receptor family | PRINTS | PR00243 | MUSCARINICR | coord: 279..289 score: 34.39 coord: 595..613 score: 32.72 coord: 190..200 score: 53.75 coord: 163..171 score: 42.03 coord: 626..640 score: 27.54 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 605..631 score: 28.36 coord: 222..244 score: 23.67 coord: 258..279 score: 20.56 coord: 306..329 score: 23.55 coord: 142..166 score: 23.99 coord: 175..196 score: 30.3 coord: 568..592 score: 32.68 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 157..623 e-value: 2.2E-58 score: 197.2 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 228..244 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 547..641 e-value: 3.8E-83 score: 278.4 coord: 122..342 e-value: 3.8E-83 score: 278.4 |
None | No IPR available | PANTHER | PTHR24249:SF52 | MUSCARINIC ACETYLCHOLINE RECEPTOR-RELATED | coord: 134..642 |
None | No IPR available | PANTHER | PTHR24249 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR | coord: 134..642 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 540..640 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 109..348 |
None | No IPR available | TMHMM | TMhelix | | coord: 177..199 |
None | No IPR available | TMHMM | TMhelix | | coord: 219..238 |
None | No IPR available | TMHMM | TMhelix | | coord: 307..329 |
None | No IPR available | TMHMM | TMhelix | | coord: 604..626 |
None | No IPR available | TMHMM | TMhelix | | coord: 259..281 |
None | No IPR available | TMHMM | TMhelix | | coord: 143..165 |
None | No IPR available | TMHMM | TMhelix | | coord: 572..594 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 157..623 score: 35.878 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000011964 ID=EMLSAP00000011964|Name=EMLSAP00000011964|organism=Lepeophtheirus salmonis|type=polypeptide|length=645bp MEENKSSLVLTIGENYITKWKLEKQKKRLCNTALGRDLPECFPSISIDDL PIIRNRKKSSSFPFNQTELFTNLIEQYDQYVSSTTNPSSTPPLLPNDNNL CLSFFGYNNSSELCRNYSLSKQSIPCGPECWPAPFGTALTVLIAIFLAIC IVITTFGNLLVLVSFVVERQIRQPPNFFIASLAITDVLIGTVSMPFYTIY VLVGYWPDELGPMLCDLWLSVDYTVCLVSQFTVLSITIDRFCSVKFATQY RTWRTGNKIMAVVVTIWVVSALLFFVSIFGWEHFIGKRDLLPGECMVQFL KDPLFNTSLIIGYYWIPLVILIVLYSFIFQTAWTLSKKTRGKEKERQKCL NMARKPLAAPSEALKTKSNPTNVREVRPTVLHITPVTNNTVAKTTVEKKA TEIVSPDRCRGEKCIGHAAPCNHRRKKPGPSISMESKSTQISPTSLVSMY QHYARTTKLKNVKKSSSHNXKSPXPAVLHIVVEDQSLEHRKVVMSELDSI KKINASPKQEQTESDHRLAKEERITTSQFLTVKGKRSKVIVLKTIRKKLR FRRRKKDKNMIENRAKKALRMISIILGAFVACWTPYHVIAILASFYPTAV NIHVYMISYFLCYANAQINPFCYAASNQQFKNAFKRIMKGDFSIK back to top
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