EMLSAP00000012488, EMLSAP00000012488 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012488
Unique NameEMLSAP00000012488
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length445
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 408..429
IPR002453Beta tubulinPRINTSPR01163BETATUBULINcoord: 212..224
score: 82.68
coord: 377..388
score: 80.76
coord: 311..329
score: 76.63
coord: 412..430
score: 84.42
coord: 88..99
score: 94.76
coord: 265..281
score: 82.08
coord: 329..343
score: 89.56
coord: 152..164
score: 90.86
coord: 108..126
score: 83.4
coord: 41..58
score: 68.92
coord: 245..258
score: 89.06
coord: 230..239
score: 77.14
coord: 347..370
score: 81.69
IPR000217TubulinPRINTSPR01161TUBULINcoord: 370..398
score: 67.7
coord: 176..189
score: 79.11
coord: 10..30
score: 71.94
coord: 132..150
score: 79.22
coord: 51..70
score: 63.09
coord: 93..104
score: 76.26
coord: 106..130
score: 66.44
coord: 151..172
score: 54.92
coord: 190..210
score: 68.3
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 3..441
IPR003008Tubulin/FtsZ, GTPase domainSMARTSM00864Tubulincoord: 47..244
e-value: 2.5E-68
score: 243.0
IPR003008Tubulin/FtsZ, GTPase domainGENE3D3.40.50.1440coord: 1..263
e-value: 5.1E-150
score: 497.7
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 3..222
e-value: 2.3E-70
score: 236.6
IPR003008Tubulin/FtsZ, GTPase domainSUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1..243
IPR018316Tubulin/FtsZ, 2-layer sandwich domainSMARTSM00865Tubulin_Ccoord: 246..383
e-value: 3.5E-49
score: 179.4
IPR018316Tubulin/FtsZ, 2-layer sandwich domainGENE3D3.30.1330.20coord: 264..373
e-value: 1.7E-53
score: 178.9
IPR018316Tubulin/FtsZ, 2-layer sandwich domainPFAMPF03953Tubulin_Ccoord: 261..382
e-value: 7.2E-49
score: 164.8
IPR023123Tubulin, C-terminalGENE3D1.10.287.600coord: 374..429
e-value: 2.9E-36
score: 122.5
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 140..146
IPR013838Beta tubulin, autoregulation binding sitePROSITEPS00228TUBULIN_B_AUTOREGcoord: 1..4
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 244..429

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012488 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012488EMLSAT00000012488-708335Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012488 ID=EMLSAP00000012488|Name=EMLSAP00000012488|organism=Lepeophtheirus salmonis|type=polypeptide|length=445bp
MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPNGQYAGTTDLQLERIDVY
YNEAGNSKYVPRAILIDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNN
WAKGHYTEGAELVXSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL
LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY
CIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL
RKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTXAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVK
TAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG
EGMDEMEFTEAESNMNDLVSEYQQYQEASVDDDEYFDEEGEAEVE
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