39s ribosomal protein mitochondrial, maker-scaffold11_size778918-snap-gene-6.47 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000008216 (supercontig:LSalAtl2s:LSalAtl2s495:60377:62251:1 gene:EMLSAG00000008216 transcript:EMLSAT00000008216 description:"maker-LSalAtl2s495-augustus-gene-0.17") HSP 1 Score: 241.891 bits (616), Expect = 1.540e-77 Identity = 139/346 (40.17%), Postives = 225/346 (65.03%), Query Frame = 0 Query: 29 LGTAGPSLF-----HTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGR--SKKISAGFVTRIILKLQDSPHYTEYSIVHDTISDVKLQQYQEQQ 367 LG++ LF H + LE AR+ TR++K K A+ANKKKKE+RLR+ PPPLP K+ LML++ L N R LR + E P DDV+ ++ +PR + +EA+ +L+ + P + + P+ ++ AKIE M G+K +++E F++ V I H++DE + K +C FVP +E + A+ GA + GG++LI +I KGRV++S+I++F+ HED+V +K G LR+K P++ + T+G +I+ MV+TF +G +IS++KV PSL+ +EP+YGY V G L + ++++ N+N L +L E ++ F+TR +L + D+ ++ SIVHD I D K Q++ E+Q Sbjct: 8 LGSSCAFLFEKRXIHLGSSLEAARRMTRDRKRKXALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWXN-RHLRD-KDENPVPVDDVFSLQIFTWPRYSIKEAIEKLRDFYDPTMFDNPNALVKAKIEFRMIGSKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDEESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRKQEGTLGNNIEYMVKTFTNGQKISIKKVPPSLLVEDEPDYGYCIVEFGRLQMDIEKLEDNINGILLALSEKNVMTRVSKKDFITRCMLHVDDN-FPSKISIVHDLILDKKGQKFMERQ 350
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|224493238|sp|A6QPQ5.1|RM01_BOVIN (RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt; Short=MRP-L1; Flags: Precursor) HSP 1 Score: 71.633 bits (174), Expect = 1.008e-12 Identity = 62/239 (25.94%), Postives = 110/239 (46.03%), Query Frame = 0 Query: 106 PEDDVYQMRHHCYPRCAFE-EAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAG-FVTRIILKLQDS 342 PEDDVY R YPR +E E L F P ++ + L+M K+ K VE F +++ + + ++ ++ F A GA GG LIQ I+ ++ D ++ +++P + L+ + P+ +++VG DI +M++ FK+G+EI V +E + E I L +D++ ANL + ++ + R + ++ G FV R L+ S Sbjct: 82 PEDDVYLKR--LYPRQIYEVEKAVNLLKKFQVLDFTNPKQGVYLDLTLDMTLGKKKK-VEPFASVLSLPYPFISEMS--KVAVFTGNASEIKIAEENGAAFAGGTNLIQKILDDEIQA---DFYIAVPEIMPELNPLRKKLKTRFPKFNRNSVGRDIPKMLELFKTGLEIKV----------DEERENFLETKIATLDMPSDQIAANLQAVINEVC--RQRPLNLGPFVVRAFLRSSTS 300
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|239938694|sp|Q9BYD6.2|RM01_HUMAN (RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt; Short=MRP-L1; AltName: Full=Mitochondrial large ribosomal subunit protein uL1m; Flags: Precursor) HSP 1 Score: 69.3218 bits (168), Expect = 6.318e-12 Identity = 62/239 (25.94%), Postives = 107/239 (44.77%), Query Frame = 0 Query: 106 PEDDVYQMRHHCYPRCAFE-EAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAG-FVTRIILKLQDS 342 PEDDVY R YPR +E E L F P ++ + L+M K+ K VE F +++ + + + ++ F A GA GG LIQ I + D +V +++P + L +K P+ ++++G DI +M++ FK+G EI V +E + + I L ++D++ ANL + ++ + R + ++ G FV R L+ S Sbjct: 82 PEDDVYLKR--LYPRQIYEVEKAVHLLKKFQILDFTSPKQSVYLDLTLDMALGKK-KNVEPFTSVLSLPYPFASEI--NKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV----------DEERENFLQTKIATLDMSSDQIAANLQAVINEVC--RHRPLNLGPFVVRAFLRSSTS 300
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|239938695|sp|Q99N96.2|RM01_MOUSE (RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt; Short=MRP-L1; Flags: Precursor) HSP 1 Score: 66.6254 bits (161), Expect = 4.617e-11 Identity = 60/238 (25.21%), Postives = 105/238 (44.12%), Query Frame = 0 Query: 106 PEDDVYQMRHHCYPRCAFE-EAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDS 342 PEDDVY R YPR +E E L F P ++ + L+M K+ K VE F +A+ H + V ++ F A GA GG +L++ I+ V + D +V +++ + L+++ P+ ++++G DI +M++ FK+ EI V +E + I L +D++ ANL + ++ + + R + FV R L+ S Sbjct: 87 PEDDVYLKR--LYPRRIYEVEKAIHLLKKFQVLDFTNPKQGVYLDLTLDMALGKK-KTVEPFASVIALPHLFSSEV--NKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVV---DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTAHEIMV----------DEERQNFLSTKIATLDMPSDQIAANLQAVINEVCKHRPLNLGP-FVVRAFLRSSTS 305
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290561214|gb|ADD38009.1| (39S ribosomal protein L1, mitochondrial [Lepeophtheirus salmonis]) HSP 1 Score: 261.922 bits (668), Expect = 2.507e-81 Identity = 139/346 (40.17%), Postives = 226/346 (65.32%), Query Frame = 0 Query: 29 LGTAGPSLF-----HTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGR--SKKISAGFVTRIILKLQDSPHYTEYSIVHDTISDVKLQQYQEQQ 367 LG++ LF H + LE AR+ TR++K K+A+ANKKKKE+RLR+ PPPLP K+ LML++ L N R LR + E P DDV+ ++ +PR + +EA+ +L+ + P + + P+ ++ AKIE M G+K +++E F++ V I H++DE + K +C FVP +E + A+ GA + GG++LI +I KGRV++S+I++F+ HED+V +K G LR+K P++ + T+G +I+ MV+TF +G +IS++KV PSL+ +EP+YGY V G L + ++++ N+N L +L E ++ F+TR +L + D+ ++ SIVHD I D K Q++ E+Q Sbjct: 8 LGSSCAFLFEKRTIHLGSSLEAARRMTRDRKRKIALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWDN-RHLRD-KDENPVPVDDVFSLQIFTWPRYSIKEAIEKLRDFYDPTMFDNPNALVKAKIEFRMIGSKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDEESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRKQEGTLGNNIEYMVKTFTNGQKISIKKVPPSLLVEDEPDYGYCIVEFGRLQMDIEKLEDNINGILLALSEKNVMTRVSKKDFITRCMLHVDDN-FPSKISIVHDLILDKKGQKFMERQ 350
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|225718968|gb|ACO15330.1| (50S ribosomal protein L1 [Caligus clemensi]) HSP 1 Score: 254.218 bits (648), Expect = 2.840e-78 Identity = 136/329 (41.34%), Postives = 213/329 (64.74%), Query Frame = 0 Query: 37 FHTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRS-KKISAG-FVTRIILKLQDSPHYTEYSIVHDTISDVKLQQY 363 F T+++LE AR+ T+ +K K+A+ANKKKKE+RLR+ PPPLP K+ LML++ L N R LR + E P D+V+ ++H +PR +EA+ +L++ + P +L+ P+ ++ AK+E M GAK +++E ++ V I H++DE + K + AFVP +E + AL GA GG ELI I KGRV++S++++F+ HED+V +K G LREK P++ T+G++I+ MV+TF +G ++SV KV PSL +EP+YGY IG L + ++ N+N L +L E + ++S F+TR +L + D+ + SIVHD I D K +Y Sbjct: 22 FQTASVLEGARRMTQVRKRKIALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWDN-RHLRD-KDENPIPNDNVFSLQHFTWPRYTIQEAIDQLRLFYDPTLLDNPNALIKAKVEFKMTGAKSTRFIEGLDRMVPIYHKYDEDIPSKVVMAFVPDEESKKIALDAGASQAGGDELIMEIAKGRVDVSDVEYFLAHEDMVLNLKPLSGQLREKLPRKQDGTLGSNIEYMVKTFTNGQKVSVTKVPPSLFVEDEPDYGYCTAEIGKLQMDLHLLEENINGILLALSEKNAMTRVSRNDFITRCMLYVDDN-FPAKISIVHDLILDKKGGKY 347
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1325255374|ref|XP_023319715.1| (uncharacterized protein LOC111694891 [Eurytemora affinis]) HSP 1 Score: 225.713 bits (574), Expect = 4.626e-67 Identity = 136/361 (37.67%), Postives = 219/361 (60.66%), Query Frame = 0 Query: 1 LRAMLRSLSQGLARQLAISPAQPRLWPGLGTAGPSLFHTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDSPHYTEYSIVHDTISDVKLQ 361 +R M+R + GL + +I Q + +P G HTSA++ERAR+ TR +K K+ + NKKKKEERLRK PPP+P K+ LML+ P RA + E FP DD + + + R + EA++ L+ H+ P L+ P+ ++ A+IE++M +++ KY+E F K V + + ++ V+EK I AF +E A GA GG +LI++I KG+VE+ + D+F+ H+D+ ++ +GVLREK P++ T+GTD+++MV+TFK+G + V+K K +L Y ++P +GY E +G L D++ N + L+SL E K+ S GF+TR+ + D +++S+ HD I D K + Sbjct: 5 VRQMIRPIRVGLHHKSSIIFQQIQPFPVQGLISILPLHTSAVVERARQSTRLRKRKVYMDNKKKKEERLRKNPPPIPHKVQLMLKAKGFGSKPIDWRARD-EKPFPFDDTWDEQWFTWRRLSVPEALSCLREHYHPTQLDNPNGIVLARIEIDMSASRKEKYIEAFTKMVPLYNAFERGVSEKMILAFAKNEESLDAARNAGATKVGGLDLIEDISKGKVEVIDYDYFLAHDDISLELRPLLGVLREKFPKKTLGTIGTDLEKMVKTFKNGQLVEVKKPKSTLGYNDDPAFGYCEAQVGRLGMPDDQIFENFTNILESLRESAPKR-SGGFITRVQFYM-DGYLKSKFSVHHDLIDDAKYK 362
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|225712600|gb|ACO12146.1| (39S ribosomal protein L1, mitochondrial precursor [Lepeophtheirus salmonis]) HSP 1 Score: 213.772 bits (543), Expect = 9.913e-64 Identity = 107/255 (41.96%), Postives = 173/255 (67.84%), Query Frame = 0 Query: 29 LGTAGPSLF-----HTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQK 278 LG++ LF H + LE AR+ TR++K K+A+ANKKKKE+RLR+ PPPLP K+ LML++ L N R LR + E P DDV+ ++H +PR + +EA+ +L+ + P + + P+ ++ AKIE M G+K +++E F++ V I H++DE + K +C FVP +E + A+ GA + GG++LI +I KGRV++S+I++F+ HED+V +K G LR+K P++ + T+G +I+ MV+TF +G +IS++K Sbjct: 8 LGSSCAFLFEKRTIHLGSSLEAARRMTRDRKRKIALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWDN-RHLRD-KDENPVPVDDVFSLQHFTWPRYSIKEAIEKLRDFYDPTMFDNPNALVKAKIEFRMIGSKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDEESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRKQEGTLGNNIEYMVKTFTNGQKISIKK 260
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|321470662|gb|EFX81637.1| (hypothetical protein DAPPUDRAFT_49875 [Daphnia pulex]) HSP 1 Score: 146.362 bits (368), Expect = 7.186e-37 Identity = 100/301 (33.22%), Postives = 159/301 (52.82%), Query Frame = 0 Query: 46 ARKGTREKKAK-LAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDSP 343 ARKGTR++K K + A K KKEE + P K L + P+ PR + EL PE DDV+ RH +F EAV + P V N P+ ++ K+EL+M+ K+ +Y++ F++ V + H +D K + AF TQE + EA+ GA GG +LI+ I G V +++ D+F+ H +++ + G+L+ K P ++G ++ +MV+ F G+E S K NE +YG E+P G LT T+E++AN ++ L + R+K + F+TR + SP Sbjct: 33 ARKGTRDRKTKKTSKAEKVKKEEFV-------PYK--LKMAKASGPVGPRRM----IELNKPEAIDDVFFTRHFMTRPISFAEAVQFQRETNHPSVYNSPEALISMKVELDMQLQKKNRYMDNFSRIVVLPHSFDFQPIRK-VLAFCKTQETQDEAVKAGADAVGGLDLIKRIQSGEVPLTDYDYFIAHTNMMADVLPLRGLLKRKLPNVKNGSIGINMTKMVEIFSKGLEFSSTKDD------NELDYGLVEIPFGNLTMPTEELEANFSAILKDIESCRAKPFGS-FITRCYVLSPPSP 312
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|644992060|ref|XP_001605669.3| (PREDICTED: 39S ribosomal protein L1, mitochondrial [Nasonia vitripennis]) HSP 1 Score: 145.976 bits (367), Expect = 2.367e-36 Identity = 102/295 (34.58%), Postives = 159/295 (53.90%), Query Frame = 0 Query: 46 ARKGTREKKAKLAIANKKKK---EERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRI 335 ARKGTREK K + + KK EE++R+ KKI ++ +P + E T P DDV+ MR+ + +F EA+ + +F P + + PD ++ ELN+ G K+ K V FNK V + H +D E+R+ AF +E A AL GA++ GG ++I+ I+ G + I D V H ++P + T G+L++K P T+G DIK +V G++ + KP Y + PEYG EVPIG L+ T+ ++ NL SA+DS++ + K+ F+TR+ Sbjct: 78 ARKGTREKAKKKKVKVEVKKLTFEEKVRRS-----KKINII----------KPDAMITNEHTKPVAVDDVFYMRYFRWKVYSFAEAIQNHREYFHPTMYDAPDSIVCVNAELNLTGVKKTKPVGTFNKIVPVKHHFDHG-EERRLLAFCKAEEDVAAALDAGAVLAGGSDIIKLILSGEISIHNYDTVVAHPSMMPEVLTLRGLLKKKYPNIKNSTLGMDIKSIVHLHLHGIKYT---AKP---YEHFPEYGVAEVPIGKLSMETEHLEDNLRSAIDSILSAKPKR-PGPFITRL 349
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1022775506|gb|KZS19365.1| (39S ribosomal protein L1 [Daphnia magna]) HSP 1 Score: 142.124 bits (357), Expect = 5.663e-35 Identity = 106/331 (32.02%), Postives = 167/331 (50.45%), Query Frame = 0 Query: 22 QPRLWPGLGTAGPSLFHTSA-LLER----ARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDSPHY 345 Q RL L G SL + LL + ARKGTRE+K K KK + + K+ +P K+ L L +P PR L E+ PE DDVY +H + +AV + P V + P+ ++ K+ELNM+ K+ +Y++ F++ V + H + E +++ AF TQE + +A GA GG +L++ I G V +S+ D+FV H +++ + G+L+ K P +VG D+ +M+Q F G+E + + L +YG EVP G LT +E++AN + L + R+ + S FVTR + SP Y Sbjct: 27 QQRLICSLTPVGSSLLVSRVPLLNQQRFAARKGTRERKGK------KKVKAEIAKKEEFVPYKVKLA--RLHVPEGPRRL----VEINKPEVVDDVYFTKHFMNVPISLVDAVQFHRETNHPSVYDSPEALVTMKVELNMQLEKKNRYLDNFSRIVLLPHSF-EYQPVRKVLAFCKTQETQEDATKAGADAVGGLDLVKRIQSGEVPLSDYDYFVAHTNMMAEILPLRGLLKRKLPNVKNGSVGVDMPKMIQLFSKGIEFASTRDAYEL------DYGLVEVPFGRLTMPMEELEANFSIILKDIESCRA-RTSGSFVTRCYVLSPPSPEY 337
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1227103706|gb|OXU26714.1| (hypothetical protein TSAR_007310, partial [Trichomalopsis sarcophagae]) HSP 1 Score: 139.428 bits (350), Expect = 9.012e-34 Identity = 104/315 (33.02%), Postives = 161/315 (51.11%), Query Frame = 0 Query: 46 ARKGTREKKAKLAIANKKKK---EERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIG--------------------LLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRI 335 ARKGTREK K + + KK EE++R+ KKI ++ +P + E T P DDVY MR+ + +F EA+ + +F P + + PD ++ ELNM G K+ K V FNK V + H +D E+R+ AF T+E A AL GA++ GG ++I+ I+ G + + D V H ++P + T G+L++K P T+G DIK +V G++ + KP Y + PEYG EVPIG +L+ T+ ++ NL SA+DS++ + K+ F+TR+ Sbjct: 69 ARKGTREKAKKKKVKVEVKKLTFEEKVRRS-----KKINVL----------KPDAMISNEHTKPVAIDDVYHMRYFQWKVYSFAEAIQNHREYFHPTMYDAPDSIVCVNAELNMTGVKKTKPVGTFNKIVPVKHNFDHG-EERRLLAFCKTEEDVAAALDAGAVLAGGSDIIKLILSGEISLHNYDTVVAHPSMMPEVLTLRGLLKKKYPNIKTGTLGIDIKSIVHLHLHGIKYT---AKP---YEHFPEYGVAEVPIGKVLTKDYDTLCWNELWFYYIVLSMETEHLEDNLRSAIDSILSAKPKR-PGPFITRL 360
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|817188681|ref|XP_012288922.1| (uncharacterized protein LOC105704356 [Orussus abietinus]) HSP 1 Score: 136.346 bits (342), Expect = 4.738e-33 Identity = 96/293 (32.76%), Postives = 155/293 (52.90%), Query Frame = 0 Query: 46 ARKGTREKKAKLAIANKKKKEERL----RKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTR 334 ARKGTREK A+ A A + KE + ++ P + +M L L++ +P +AV D+VY MR+ + +F EAV + P V+N P++ + A IEL+M G K+ K +EF++ I H+++ T + + AF E +AEA A GA + GG ++I+ I KG V +S+ DH V + D++P + G+L++K P + T+ D+K M+ F G+ S +K + Y PEYG +V G L T +++ N + L + R K+ F+TR Sbjct: 33 ARKGTREK-ARRAKAKRVVKEVEVIPITQRGKKPDKRALMKELEKLQIRDVGKP-KAV--------DNVYPMRYFSWKSYSFAEAVQCHRETHHPTVMNIPNEYVTAVIELDMHGVKKTKLADEFSRIAEIPHKFERT-QKPTLMAFCKCPETKAEAEAAGATLVGGIDIIKQIQKGEVSLSDFDHVVAYPDILPELVAIKGLLKKKFPANSKGTLSNDMKSMIYKFLHGIPYSAKK---NAFY---PEYGRVDVAFGKLEMETSDLEENFAAVLKDINSARPKR-EGPFITR 307
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|926631433|ref|XP_013781447.1| (39S ribosomal protein L1, mitochondrial-like [Limulus polyphemus]) HSP 1 Score: 134.035 bits (336), Expect = 6.221e-32 Identity = 83/292 (28.42%), Postives = 153/292 (52.40%), Query Frame = 0 Query: 46 ARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIIL 337 AR+G REK + K +K+E ++K +P I + ++N+ I PR T P DDV++ + + + EA+ + P +LN P+ +L + IEL+M+ K+ +Y++ F + + + +K++ F E + AL GA M G +I+ I G + + + DH V H D++ + T G+L++ P R + +GTDI +V+ F G++ K + +E ++G+ +VPIG L T+E++ NL + L+ + + K ++A F+TR++L Sbjct: 71 ARRGKREK---MKATKKSQKKEVVKKEF--VPYHIKMAMKNI--VIKPRRENVDHWLKTPPIDDVWRAKFYKKKIYSVMEAIEMHRETHHPTILNEPEAILSSTIELDMRMPKKNRYLDNFTGTIKLPYELKMDNNKKKVLVFCKDSEDQTGALKAGAFMAGSSGVIKQIQTGELTVQDFDHVVAHIDMLAELGTIRGLLKKSFPNRNKGNLGTDIVPLVELFVQGVDYKSNKDE------HELDFGWVDVPIGRLNMETNELQQNLFTVLNQVETHKPKGVAAPFITRVLL 349 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold11_size778918:703602..706493+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold11_size778918-snap-gene-6.47 ID=maker-scaffold11_size778918-snap-gene-6.47|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=2892bp|location=Sequence derived from alignment at scaffold11_size778918:703602..706493+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
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