39s ribosomal protein mitochondrial, maker-scaffold11_size778918-snap-gene-6.47 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial
Unique Namemaker-scaffold11_size778918-snap-gene-6.47
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000008216 (supercontig:LSalAtl2s:LSalAtl2s495:60377:62251:1 gene:EMLSAG00000008216 transcript:EMLSAT00000008216 description:"maker-LSalAtl2s495-augustus-gene-0.17")

HSP 1 Score: 241.891 bits (616), Expect = 1.540e-77
Identity = 139/346 (40.17%), Postives = 225/346 (65.03%), Query Frame = 0
Query:   29 LGTAGPSLF-----HTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGR--SKKISAGFVTRIILKLQDSPHYTEYSIVHDTISDVKLQQYQEQQ 367
            LG++   LF     H  + LE AR+ TR++K K A+ANKKKKE+RLR+ PPPLP K+ LML++  L  N R LR  + E   P DDV+ ++   +PR + +EA+ +L+  + P + + P+ ++ AKIE  M G+K  +++E F++ V I H++DE +  K +C FVP +E +  A+  GA + GG++LI +I KGRV++S+I++F+ HED+V  +K   G LR+K P++ + T+G +I+ MV+TF +G +IS++KV PSL+  +EP+YGY  V  G L  + ++++ N+N  L +L E    ++     F+TR +L + D+   ++ SIVHD I D K Q++ E+Q
Sbjct:    8 LGSSCAFLFEKRXIHLGSSLEAARRMTRDRKRKXALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWXN-RHLRD-KDENPVPVDDVFSLQIFTWPRYSIKEAIEKLRDFYDPTMFDNPNALVKAKIEFRMIGSKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDEESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRKQEGTLGNNIEYMVKTFTNGQKISIKKVPPSLLVEDEPDYGYCIVEFGRLQMDIEKLEDNINGILLALSEKNVMTRVSKKDFITRCMLHVDDN-FPSKISIVHDLILDKKGQKFMERQ 350          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|224493238|sp|A6QPQ5.1|RM01_BOVIN (RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt; Short=MRP-L1; Flags: Precursor)

HSP 1 Score: 71.633 bits (174), Expect = 1.008e-12
Identity = 62/239 (25.94%), Postives = 110/239 (46.03%), Query Frame = 0
Query:  106 PEDDVYQMRHHCYPRCAFE-EAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAG-FVTRIILKLQDS 342
            PEDDVY  R   YPR  +E E    L   F       P   ++  + L+M   K+ K VE F   +++ + +   ++  ++  F         A   GA   GG  LIQ I+   ++    D ++   +++P +      L+ + P+  +++VG DI +M++ FK+G+EI V          +E    + E  I  L   +D++ ANL + ++ +   R + ++ G FV R  L+   S
Sbjct:   82 PEDDVYLKR--LYPRQIYEVEKAVNLLKKFQVLDFTNPKQGVYLDLTLDMTLGKKKK-VEPFASVLSLPYPFISEMS--KVAVFTGNASEIKIAEENGAAFAGGTNLIQKILDDEIQA---DFYIAVPEIMPELNPLRKKLKTRFPKFNRNSVGRDIPKMLELFKTGLEIKV----------DEERENFLETKIATLDMPSDQIAANLQAVINEVC--RQRPLNLGPFVVRAFLRSSTS 300          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|239938694|sp|Q9BYD6.2|RM01_HUMAN (RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt; Short=MRP-L1; AltName: Full=Mitochondrial large ribosomal subunit protein uL1m; Flags: Precursor)

HSP 1 Score: 69.3218 bits (168), Expect = 6.318e-12
Identity = 62/239 (25.94%), Postives = 107/239 (44.77%), Query Frame = 0
Query:  106 PEDDVYQMRHHCYPRCAFE-EAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAG-FVTRIILKLQDS 342
            PEDDVY  R   YPR  +E E    L   F       P   ++  + L+M   K+ K VE F   +++ + +   +   ++  F         A   GA   GG  LIQ I    +     D +V   +++P +      L +K P+  ++++G DI +M++ FK+G EI V          +E    + +  I  L  ++D++ ANL + ++ +   R + ++ G FV R  L+   S
Sbjct:   82 PEDDVYLKR--LYPRQIYEVEKAVHLLKKFQILDFTSPKQSVYLDLTLDMALGKK-KNVEPFTSVLSLPYPFASEI--NKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV----------DEERENFLQTKIATLDMSSDQIAANLQAVINEVC--RHRPLNLGPFVVRAFLRSSTS 300          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|239938695|sp|Q99N96.2|RM01_MOUSE (RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt; Short=MRP-L1; Flags: Precursor)

HSP 1 Score: 66.6254 bits (161), Expect = 4.617e-11
Identity = 60/238 (25.21%), Postives = 105/238 (44.12%), Query Frame = 0
Query:  106 PEDDVYQMRHHCYPRCAFE-EAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDS 342
            PEDDVY  R   YPR  +E E    L   F       P   ++  + L+M   K+ K VE F   +A+ H +   V   ++  F         A   GA   GG +L++ I+   V +   D +V   +++  +      L+++ P+  ++++G DI +M++ FK+  EI V          +E    +    I  L   +D++ ANL + ++ + + R   +   FV R  L+   S
Sbjct:   87 PEDDVYLKR--LYPRRIYEVEKAIHLLKKFQVLDFTNPKQGVYLDLTLDMALGKK-KTVEPFASVIALPHLFSSEV--NKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVV---DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTAHEIMV----------DEERQNFLSTKIATLDMPSDQIAANLQAVINEVCKHRPLNLGP-FVVRAFLRSSTS 305          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290561214|gb|ADD38009.1| (39S ribosomal protein L1, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 261.922 bits (668), Expect = 2.507e-81
Identity = 139/346 (40.17%), Postives = 226/346 (65.32%), Query Frame = 0
Query:   29 LGTAGPSLF-----HTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGR--SKKISAGFVTRIILKLQDSPHYTEYSIVHDTISDVKLQQYQEQQ 367
            LG++   LF     H  + LE AR+ TR++K K+A+ANKKKKE+RLR+ PPPLP K+ LML++  L  N R LR  + E   P DDV+ ++   +PR + +EA+ +L+  + P + + P+ ++ AKIE  M G+K  +++E F++ V I H++DE +  K +C FVP +E +  A+  GA + GG++LI +I KGRV++S+I++F+ HED+V  +K   G LR+K P++ + T+G +I+ MV+TF +G +IS++KV PSL+  +EP+YGY  V  G L  + ++++ N+N  L +L E    ++     F+TR +L + D+   ++ SIVHD I D K Q++ E+Q
Sbjct:    8 LGSSCAFLFEKRTIHLGSSLEAARRMTRDRKRKIALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWDN-RHLRD-KDENPVPVDDVFSLQIFTWPRYSIKEAIEKLRDFYDPTMFDNPNALVKAKIEFRMIGSKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDEESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRKQEGTLGNNIEYMVKTFTNGQKISIKKVPPSLLVEDEPDYGYCIVEFGRLQMDIEKLEDNINGILLALSEKNVMTRVSKKDFITRCMLHVDDN-FPSKISIVHDLILDKKGQKFMERQ 350          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|225718968|gb|ACO15330.1| (50S ribosomal protein L1 [Caligus clemensi])

HSP 1 Score: 254.218 bits (648), Expect = 2.840e-78
Identity = 136/329 (41.34%), Postives = 213/329 (64.74%), Query Frame = 0
Query:   37 FHTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRS-KKISAG-FVTRIILKLQDSPHYTEYSIVHDTISDVKLQQY 363
            F T+++LE AR+ T+ +K K+A+ANKKKKE+RLR+ PPPLP K+ LML++  L  N R LR  + E   P D+V+ ++H  +PR   +EA+ +L++ + P +L+ P+ ++ AK+E  M GAK  +++E  ++ V I H++DE +  K + AFVP +E +  AL  GA   GG ELI  I KGRV++S++++F+ HED+V  +K   G LREK P++   T+G++I+ MV+TF +G ++SV KV PSL   +EP+YGY    IG L  +   ++ N+N  L +L E  +  ++S   F+TR +L + D+    + SIVHD I D K  +Y
Sbjct:   22 FQTASVLEGARRMTQVRKRKIALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWDN-RHLRD-KDENPIPNDNVFSLQHFTWPRYTIQEAIDQLRLFYDPTLLDNPNALIKAKVEFKMTGAKSTRFIEGLDRMVPIYHKYDEDIPSKVVMAFVPDEESKKIALDAGASQAGGDELIMEIAKGRVDVSDVEYFLAHEDMVLNLKPLSGQLREKLPRKQDGTLGSNIEYMVKTFTNGQKVSVTKVPPSLFVEDEPDYGYCTAEIGKLQMDLHLLEENINGILLALSEKNAMTRVSRNDFITRCMLYVDDN-FPAKISIVHDLILDKKGGKY 347          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1325255374|ref|XP_023319715.1| (uncharacterized protein LOC111694891 [Eurytemora affinis])

HSP 1 Score: 225.713 bits (574), Expect = 4.626e-67
Identity = 136/361 (37.67%), Postives = 219/361 (60.66%), Query Frame = 0
Query:    1 LRAMLRSLSQGLARQLAISPAQPRLWPGLGTAGPSLFHTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDSPHYTEYSIVHDTISDVKLQ 361
            +R M+R +  GL  + +I   Q + +P  G       HTSA++ERAR+ TR +K K+ + NKKKKEERLRK PPP+P K+ LML+       P   RA + E  FP DD +  +   + R +  EA++ L+ H+ P  L+ P+ ++ A+IE++M  +++ KY+E F K V + + ++  V+EK I AF   +E    A   GA   GG +LI++I KG+VE+ + D+F+ H+D+   ++  +GVLREK P++   T+GTD+++MV+TFK+G  + V+K K +L Y ++P +GY E  +G L    D++  N  + L+SL E   K+ S GF+TR+   + D    +++S+ HD I D K +
Sbjct:    5 VRQMIRPIRVGLHHKSSIIFQQIQPFPVQGLISILPLHTSAVVERARQSTRLRKRKVYMDNKKKKEERLRKNPPPIPHKVQLMLKAKGFGSKPIDWRARD-EKPFPFDDTWDEQWFTWRRLSVPEALSCLREHYHPTQLDNPNGIVLARIEIDMSASRKEKYIEAFTKMVPLYNAFERGVSEKMILAFAKNEESLDAARNAGATKVGGLDLIEDISKGKVEVIDYDYFLAHDDISLELRPLLGVLREKFPKKTLGTIGTDLEKMVKTFKNGQLVEVKKPKSTLGYNDDPAFGYCEAQVGRLGMPDDQIFENFTNILESLRESAPKR-SGGFITRVQFYM-DGYLKSKFSVHHDLIDDAKYK 362          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|225712600|gb|ACO12146.1| (39S ribosomal protein L1, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 213.772 bits (543), Expect = 9.913e-64
Identity = 107/255 (41.96%), Postives = 173/255 (67.84%), Query Frame = 0
Query:   29 LGTAGPSLF-----HTSALLERARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQK 278
            LG++   LF     H  + LE AR+ TR++K K+A+ANKKKKE+RLR+ PPPLP K+ LML++  L  N R LR  + E   P DDV+ ++H  +PR + +EA+ +L+  + P + + P+ ++ AKIE  M G+K  +++E F++ V I H++DE +  K +C FVP +E +  A+  GA + GG++LI +I KGRV++S+I++F+ HED+V  +K   G LR+K P++ + T+G +I+ MV+TF +G +IS++K
Sbjct:    8 LGSSCAFLFEKRTIHLGSSLEAARRMTRDRKRKIALANKKKKEDRLRRNPPPLPYKLELMLKSKGLWDN-RHLRD-KDENPVPVDDVFSLQHFTWPRYSIKEAIEKLRDFYDPTMFDNPNALVKAKIEFRMIGSKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDEESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRKQEGTLGNNIEYMVKTFTNGQKISIKK 260          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|321470662|gb|EFX81637.1| (hypothetical protein DAPPUDRAFT_49875 [Daphnia pulex])

HSP 1 Score: 146.362 bits (368), Expect = 7.186e-37
Identity = 100/301 (33.22%), Postives = 159/301 (52.82%), Query Frame = 0
Query:   46 ARKGTREKKAK-LAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDSP 343
            ARKGTR++K K  + A K KKEE +       P K  L +     P+ PR +     EL  PE  DDV+  RH      +F EAV   +    P V N P+ ++  K+EL+M+  K+ +Y++ F++ V + H +D     K + AF  TQE + EA+  GA   GG +LI+ I  G V +++ D+F+ H +++  +    G+L+ K P     ++G ++ +MV+ F  G+E S  K        NE +YG  E+P G LT  T+E++AN ++ L  +   R+K   + F+TR  +    SP
Sbjct:   33 ARKGTRDRKTKKTSKAEKVKKEEFV-------PYK--LKMAKASGPVGPRRM----IELNKPEAIDDVFFTRHFMTRPISFAEAVQFQRETNHPSVYNSPEALISMKVELDMQLQKKNRYMDNFSRIVVLPHSFDFQPIRK-VLAFCKTQETQDEAVKAGADAVGGLDLIKRIQSGEVPLTDYDYFIAHTNMMADVLPLRGLLKRKLPNVKNGSIGINMTKMVEIFSKGLEFSSTKDD------NELDYGLVEIPFGNLTMPTEELEANFSAILKDIESCRAKPFGS-FITRCYVLSPPSP 312          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|644992060|ref|XP_001605669.3| (PREDICTED: 39S ribosomal protein L1, mitochondrial [Nasonia vitripennis])

HSP 1 Score: 145.976 bits (367), Expect = 2.367e-36
Identity = 102/295 (34.58%), Postives = 159/295 (53.90%), Query Frame = 0
Query:   46 ARKGTREKKAKLAIANKKKK---EERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRI 335
            ARKGTREK  K  +  + KK   EE++R+      KKI ++          +P   +  E T P   DDV+ MR+  +   +F EA+   + +F P + + PD ++    ELN+ G K+ K V  FNK V + H +D    E+R+ AF   +E  A AL  GA++ GG ++I+ I+ G + I   D  V H  ++P + T  G+L++K P     T+G DIK +V     G++ +    KP   Y + PEYG  EVPIG L+  T+ ++ NL SA+DS++  + K+    F+TR+
Sbjct:   78 ARKGTREKAKKKKVKVEVKKLTFEEKVRRS-----KKINII----------KPDAMITNEHTKPVAVDDVFYMRYFRWKVYSFAEAIQNHREYFHPTMYDAPDSIVCVNAELNLTGVKKTKPVGTFNKIVPVKHHFDHG-EERRLLAFCKAEEDVAAALDAGAVLAGGSDIIKLILSGEISIHNYDTVVAHPSMMPEVLTLRGLLKKKYPNIKNSTLGMDIKSIVHLHLHGIKYT---AKP---YEHFPEYGVAEVPIGKLSMETEHLEDNLRSAIDSILSAKPKR-PGPFITRL 349          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1022775506|gb|KZS19365.1| (39S ribosomal protein L1 [Daphnia magna])

HSP 1 Score: 142.124 bits (357), Expect = 5.663e-35
Identity = 106/331 (32.02%), Postives = 167/331 (50.45%), Query Frame = 0
Query:   22 QPRLWPGLGTAGPSLFHTSA-LLER----ARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIILKLQDSPHY 345
            Q RL   L   G SL  +   LL +    ARKGTRE+K K      KK +  + K+   +P K+ L    L +P  PR L     E+  PE  DDVY  +H      +  +AV   +    P V + P+ ++  K+ELNM+  K+ +Y++ F++ V + H + E    +++ AF  TQE + +A   GA   GG +L++ I  G V +S+ D+FV H +++  +    G+L+ K P     +VG D+ +M+Q F  G+E +  +    L      +YG  EVP G LT   +E++AN +  L  +   R+ + S  FVTR  +    SP Y
Sbjct:   27 QQRLICSLTPVGSSLLVSRVPLLNQQRFAARKGTRERKGK------KKVKAEIAKKEEFVPYKVKLA--RLHVPEGPRRL----VEINKPEVVDDVYFTKHFMNVPISLVDAVQFHRETNHPSVYDSPEALVTMKVELNMQLEKKNRYLDNFSRIVLLPHSF-EYQPVRKVLAFCKTQETQEDATKAGADAVGGLDLVKRIQSGEVPLSDYDYFVAHTNMMAEILPLRGLLKRKLPNVKNGSVGVDMPKMIQLFSKGIEFASTRDAYEL------DYGLVEVPFGRLTMPMEELEANFSIILKDIESCRA-RTSGSFVTRCYVLSPPSPEY 337          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1227103706|gb|OXU26714.1| (hypothetical protein TSAR_007310, partial [Trichomalopsis sarcophagae])

HSP 1 Score: 139.428 bits (350), Expect = 9.012e-34
Identity = 104/315 (33.02%), Postives = 161/315 (51.11%), Query Frame = 0
Query:   46 ARKGTREKKAKLAIANKKKK---EERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPE--DDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIG--------------------LLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRI 335
            ARKGTREK  K  +  + KK   EE++R+      KKI ++          +P   +  E T P   DDVY MR+  +   +F EA+   + +F P + + PD ++    ELNM G K+ K V  FNK V + H +D    E+R+ AF  T+E  A AL  GA++ GG ++I+ I+ G + +   D  V H  ++P + T  G+L++K P     T+G DIK +V     G++ +    KP   Y + PEYG  EVPIG                    +L+  T+ ++ NL SA+DS++  + K+    F+TR+
Sbjct:   69 ARKGTREKAKKKKVKVEVKKLTFEEKVRRS-----KKINVL----------KPDAMISNEHTKPVAIDDVYHMRYFQWKVYSFAEAIQNHREYFHPTMYDAPDSIVCVNAELNMTGVKKTKPVGTFNKIVPVKHNFDHG-EERRLLAFCKTEEDVAAALDAGAVLAGGSDIIKLILSGEISLHNYDTVVAHPSMMPEVLTLRGLLKKKYPNIKTGTLGIDIKSIVHLHLHGIKYT---AKP---YEHFPEYGVAEVPIGKVLTKDYDTLCWNELWFYYIVLSMETEHLEDNLRSAIDSILSAKPKR-PGPFITRL 360          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|817188681|ref|XP_012288922.1| (uncharacterized protein LOC105704356 [Orussus abietinus])

HSP 1 Score: 136.346 bits (342), Expect = 4.738e-33
Identity = 96/293 (32.76%), Postives = 155/293 (52.90%), Query Frame = 0
Query:   46 ARKGTREKKAKLAIANKKKKEERL----RKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTR 334
            ARKGTREK A+ A A +  KE  +    ++   P  + +M  L  L++    +P +AV        D+VY MR+  +   +F EAV   +    P V+N P++ + A IEL+M G K+ K  +EF++   I H+++ T  +  + AF    E +AEA A GA + GG ++I+ I KG V +S+ DH V + D++P +    G+L++K P   + T+  D+K M+  F  G+  S +K   +  Y   PEYG  +V  G L   T +++ N  + L  +   R K+    F+TR
Sbjct:   33 ARKGTREK-ARRAKAKRVVKEVEVIPITQRGKKPDKRALMKELEKLQIRDVGKP-KAV--------DNVYPMRYFSWKSYSFAEAVQCHRETHHPTVMNIPNEYVTAVIELDMHGVKKTKLADEFSRIAEIPHKFERT-QKPTLMAFCKCPETKAEAEAAGATLVGGIDIIKQIQKGEVSLSDFDHVVAYPDILPELVAIKGLLKKKFPANSKGTLSNDMKSMIYKFLHGIPYSAKK---NAFY---PEYGRVDVAFGKLEMETSDLEENFAAVLKDINSARPKR-EGPFITR 307          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|926631433|ref|XP_013781447.1| (39S ribosomal protein L1, mitochondrial-like [Limulus polyphemus])

HSP 1 Score: 134.035 bits (336), Expect = 6.221e-32
Identity = 83/292 (28.42%), Postives = 153/292 (52.40%), Query Frame = 0
Query:   46 ARKGTREKKAKLAIANKKKKEERLRKRPPPLPKKIMLMLRNLRLPINPRPLRAVETELTFPEDDVYQMRHHCYPRCAFEEAVAELKVHFSPGVLNRPDDVLHAKIELNMKGAKQGKYVEEFNKYVAILHRWDETVAEKRICAFVPTQELEAEALAGGALMTGGQELIQNIVKGRVEISEIDHFVCHEDLVPLMKTAIGVLREKTPQRGQDTVGTDIKQMVQTFKSGMEISVQKVKPSLIYPNEPEYGYTEVPIGLLTQNTDEMKANLNSALDSLMEGRSKKISAGFVTRIIL 337
            AR+G REK   +    K +K+E ++K    +P  I + ++N+   I PR         T P DDV++ + +     +  EA+   +    P +LN P+ +L + IEL+M+  K+ +Y++ F   + + +       +K++  F    E +  AL  GA M G   +I+ I  G + + + DH V H D++  + T  G+L++  P R +  +GTDI  +V+ F  G++    K +      +E ++G+ +VPIG L   T+E++ NL + L+ +   + K ++A F+TR++L
Sbjct:   71 ARRGKREK---MKATKKSQKKEVVKKEF--VPYHIKMAMKNI--VIKPRRENVDHWLKTPPIDDVWRAKFYKKKIYSVMEAIEMHRETHHPTILNEPEAILSSTIELDMRMPKKNRYLDNFTGTIKLPYELKMDNNKKKVLVFCKDSEDQTGALKAGAFMAGSSGVIKQIQTGELTVQDFDHVVAHIDMLAELGTIRGLLKKSFPNRNKGNLGTDIVPLVELFVQGVDYKSNKDE------HELDFGWVDVPIGRLNMETNELQQNLFTVLNQVETHKPKGVAAPFITRVLL 349          
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000082161.540e-7740.17supercontig:LSalAtl2s:LSalAtl2s495:60377:62251:1 g... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
gi|224493238|sp|A6QPQ5.1|RM01_BOVIN1.008e-1225.94RecName: Full=39S ribosomal protein L1, mitochondr... [more]
gi|239938694|sp|Q9BYD6.2|RM01_HUMAN6.318e-1225.94RecName: Full=39S ribosomal protein L1, mitochondr... [more]
gi|239938695|sp|Q99N96.2|RM01_MOUSE4.617e-1125.21RecName: Full=39S ribosomal protein L1, mitochondr... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|290561214|gb|ADD38009.1|2.507e-8140.1739S ribosomal protein L1, mitochondrial [Lepeophth... [more]
gi|225718968|gb|ACO15330.1|2.840e-7841.3450S ribosomal protein L1 [Caligus clemensi][more]
gi|1325255374|ref|XP_023319715.1|4.626e-6737.67uncharacterized protein LOC111694891 [Eurytemora a... [more]
gi|225712600|gb|ACO12146.1|9.913e-6441.9639S ribosomal protein L1, mitochondrial precursor ... [more]
gi|321470662|gb|EFX81637.1|7.186e-3733.22hypothetical protein DAPPUDRAFT_49875 [Daphnia pul... [more]
gi|644992060|ref|XP_001605669.3|2.367e-3634.58PREDICTED: 39S ribosomal protein L1, mitochondrial... [more]
gi|1022775506|gb|KZS19365.1|5.663e-3532.0239S ribosomal protein L1 [Daphnia magna][more]
gi|1227103706|gb|OXU26714.1|9.012e-3433.02hypothetical protein TSAR_007310, partial [Trichom... [more]
gi|817188681|ref|XP_012288922.1|4.738e-3332.76uncharacterized protein LOC105704356 [Orussus abie... [more]
gi|926631433|ref|XP_013781447.1|6.221e-3228.4239S ribosomal protein L1, mitochondrial-like [Limu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold11_size778918supercontigscaffold11_size778918:703602..706493 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold11_size778918-snap-gene-6.47-mRNA-1maker-scaffold11_size778918-snap-gene-6.47-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold11_size778918:703602..706493+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold11_size778918-snap-gene-6.47 ID=maker-scaffold11_size778918-snap-gene-6.47|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=2892bp|location=Sequence derived from alignment at scaffold11_size778918:703602..706493+ (Tigriopus kingsejongensis)
ATGAAGGCATGTCAACAATTCCTGCTCCACGGCATTGGACTCGAGCCCAC TCCGATTGGATTCCGGTGATTGCGTGCCATGCTCCGCTCCTTGAGCCAGG GCTTAGCCCGCCAACTGGCCATTTCTCCCGCCCAGCCCAGGCTATGGCCC GGATTGGGGACCGCCGGACCGTCGCTTTTCCACACCTCCGCATTGCTGGA GCGAGCCCGTAAAGGCACCCGTGAGAAGAAGGCCAAGTTGGCCATTGCCA ACAAGAAGAAGAAGGAGGAGCGACTCCGGAAACGCCCACCCCCGCTGCCC AAGAAGATCATGCTCATGCTCAGAAATCTCCGACTCCCCATTAATCCCCG ACCGCTGAGGTGAGGCTGGTGGTCTCGAACCCGCTGCATCGGAGCTTCTC AGACTCAAGATCCGTTCTGTGTTTTCAGAGCCGTGGAGACGGAGCTGACT TTCCCGGAGGATGATGTGTACCAGATGCGACACCACTGCTACCCGCGATG CGCTTTCGAGGAGGCCGTGGCTGAGCTCAAGGTCCACTTCTCGCCCGGAG TCCTCAACCGACCAGACGATGTCTTGCACGCCAAGATCGAGCTGAACATG AAAGGAGCCAAACAAGTACGCGTATCCATTTGGCGCCCAATCTGGGGGAC AGGCTCGTGATGTCCGCATTTTTTAGGGCAAGTACGTGGAGGAGTTCAAT AAGTATGTGGCCATCCTTCACCGTTGGGACGAGACCGTGGCCGAGAAGCG GATCTGCGCTTTCGTGCCCACTCAGGAACTGGAGGCGGAAGCCCTAGCCG GCGGGGCCCTCATGACCGGGGGCCAAGAGCTCATTCAAAACATCGTCAAA GGCCGCGTGGAAATCGTAAGGACGCTCTGGGAGCTCGGGAGGGCACCTGG CACACCCTAGGCCAGACCTAGTGGCTTTAGCGATGGATTTCGTAGTTTGA TAAGGGTTCTCGGTCCGGTGAAGGGAACCATCGGGGCGATAGCGTTGACT ACCATGGCTGCTGGTCTGAGGTTGAAGTTCCCTGAGAGTAGACAAGATGA GACAGTATTGTGTAGTCAGCCAACAGGGGAGTTGGCTCATAAGTCATAAT AATCGTACGCGTTGCGATCAGTACTCCGGAAACAAGGCAAGCAGCGTAGC GCAATGGTAGACTGGCACAATCAGTCATCTATCATTGTGTTATCCGAGGG TCGTTGGTTCGATCCCCGGGCTTGCCAAGTTCCGGCAACTAGTGGTGTTA ACTCACAGCTATTGTTTGCTTCCCTTGCGGGATTAAAGTGGGCGTACCTG TGGTAATTCCTCGAGGGTAAGGTAATAATTCATGATAAATTTGACCGCCA GGCTGACTATGTCTCCTCGGAGATTTCCCTAGCTGGGCAGAAATGCCCAG GGCCTTCCAAACAAACAAACTCCGGAAACAAGAAGTACAATGGAACCCTT ATTGGTTGCCACTCAGTGTCCTCGGTTGTACGTAGAATGCTGCATTCGGG AAAGAAGGCAGGAAAACGGTCGATCAAAGTGCGTACAAGTGAGGGGAAGT ATGAGAATAATAATACTCGTCTCAGGATAGTATTTTTAATGTACTGTACA TGGATTGATGGCTTGAGAAACTGTTCAATTTGAAATATTTTTCGTGAAAC AATGCGTTTGCGTCTACTAGAAGTATAGGGGAAACAATGAGAAATACCAG GCTATAGGCAACATGTGCTACGCACTAGTGTTTTTCACCCAGAATTCCAG TGCGGCATGGTATTTGGAACCAACTGCTTTCCTCAGAGCTTTTCTCCTCG ATTGCTGGCTAAAAATTACGGGTAATCATAAACTACCAAGATATAAACAA AGTATCCAAGGAGAGATAAAAGTTCTCGAATCCAAAGAGACGAGAGGGTG AAAATTGACGATCCATGCTAGATTCGTAGCACGACCGTTGCTAGGGAGAC AACTGATTTGATTGTACTCTTGCAACAGTGTGTTCTGAATTCAAATCCAG CTTTTTGATTTTCCACTTTTTTTAAATCCAATTCCAATCCATGCCAGACT CAATTACGTATAAGATTGAAAAGCTGATGCAGAGGTGGGGCGCTAATTTT GGCCCCTTGGCATGGTAGTGTTCTGGGGTGTGTCTAGTATTTCCTTACCA TTAGAGGGCTAATCACCCTATCAGAGAGAACCCAAAAGAGGGCCAATCAA TTTAGTCGGCTCGACTACTTCAGCGATTCGGTGTGATGGGTTGCATCAAA ATGGTAGCAATCCAGCATGTGGTTAGCGTCAGTTCTGATTTTTTCAGTCT GAGATTGATCACTTCGTGTGCCACGAGGATCTGGTACCGTTGATGAAGAC TGCGATCGGGGTTTTGCGGGAGAAGACGCCGCAACGAGGCCAGGACACGG TCGGCACGGATATCAAGCAGATGGTGCAGACCTTCAAGTCGGGCATGGAA ATCAGTGTCCAGAAGGTCAAACCTTCTCTCATCTACCCCAACGAGCCCGA ATACGGCTACACTGAAGTGCCCATCGGTCTCCTCACGCAGAACACCGACG AAATGAAAGCCAATTTAAATTCGGCTCTGGATTCTCTCATGGAAGGAAGG TCAAAGAAGATCTCGGCCGGATTCGTCACCAGGATCATCCTGAAGCTCCA AGACAGTCCACATTACACGGAGTACTCCATTGTTCATGACACGATCAGTG ATGTCAAGTTGCAACAGTATCAAGAGCAACAACGAAAAACTGCCGTTCAA GCAGATAGCTGAAAATAAGTCCAGTAAAGCCTTCACTTTAATGTTAAAAA AAATTGCCGCCTTCCTGTTGTAACATACAGGATTGAGAGGATCCTATAAG GGAGTAGGCATTGGATTTTGTAAGCTCGACTTCCTCAACATT
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Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
Synonym
Tk03678
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