vitamin d3 receptor-like, maker-scaffold188_size271682-snap-gene-1.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 70.0922 bits (170), Expect = 7.019e-13 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0 Query: 148 DNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSR 239 ++PL + C +CG+ A+ HYG +C C+ FF+R+++ + + Y CR C + + R CQ CRY KCL GMK V +EER R Sbjct: 81 NHPLSGSKHFCSICGDRASGK-HYGVYSCEGCKGFFKRTVRKELT--YACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAV--QEERHR 167
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 69.707 bits (169), Expect = 1.240e-12 Identity = 50/140 (35.71%), Postives = 60/140 (42.86%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKARQGSQASSPGHRSDDSSNPDPLPDSGPMDASPWVPDPVGAQPGSSDKS 297 C+VCG+ ++ VHYG +TC C+ FFRRS S NY C RQ C V +R CQ CR KCL GM +R G A P RS + N PDS D QP S+D S Sbjct: 47 CKVCGDKSSG-VHYGVITCEGCKGFFRRSQSSVV--NYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM----------------------SRDGGGALXPSGRSSHNGNS---PDSSCFDTQ--------QQPSSTDMS 150
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 68.9366 bits (167), Expect = 2.382e-12 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGM 226 C +C E A +HYG +TC C+ FF+R++Q+K YTC G+C++ R CQ CR+ KCL GM Sbjct: 283 CMIC-EDRATGLHYGIITCEGCKGFFKRTVQNKRI--YTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 68.9366 bits (167), Expect = 2.979e-12 Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFR 242 C VCG+ AA HYG TC C+ FF+R++Q A Y C C V + R CQ CR+ KCL GM V ++ + RR R Sbjct: 409 CAVCGDNAACQ-HYGVRTCEGCKGFFKRTVQKNA--KYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR 490
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 68.5514 bits (166), Expect = 3.527e-12 Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 0 Query: 156 EKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMK 227 E C VCG+ A+ HYG+++C C+ FF+RSI+ + Y CR C+V R CQ CR KCL GM+ Sbjct: 218 EACVVCGDRASGR-HYGAISCEGCKGFFKRSIRKQL--GYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 62.3882 bits (150), Expect = 2.141e-10 Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 0 Query: 153 STTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMK 227 ST C VCG+ ++ HYG TC C++FF+R + + S + CR + C V R CQ CR+ KCL GMK Sbjct: 70 STEILCVVCGDKSSGK-HYGQFTCEGCKSFFKRCV--RRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMK 141
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 59.6918 bits (143), Expect = 1.457e-9 Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGM 226 CRVC E AA H+G+ TC C++FF R+ ++ S C+ +C V K+R C+ CR KC++ GM Sbjct: 57 CRVCEEPAAG-FHFGAFTCEGCKSFFGRTCNNQ-SVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGM 123
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 59.3066 bits (142), Expect = 1.634e-9 Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMK 227 C VCG+ ++ HYG TC C++FF+RS++ + Y CR C V R CQ CR KC GM+ Sbjct: 83 CVVCGDKSSGK-HYGQFTCEGCKSFFKRSVRRNLT--YQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMR 149
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000012965 (supercontig:LSalAtl2s:LSalAtl2s98:1224628:1226761:1 gene:EMLSAG00000012965 transcript:EMLSAT00000012965 description:"snap_masked-LSalAtl2s98-processed-gene-12.8") HSP 1 Score: 59.3066 bits (142), Expect = 2.460e-9 Identity = 53/237 (22.36%), Postives = 99/237 (41.77%), Query Frame = 0 Query: 402 IRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMTAYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATGTLGRIH-YRNYNSIQQLDHEPTENKYSMLMTRVGSL----VSTIPDLVKIMSYVLLFCPDYCELEDKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLI 633 I I ++ + + + + M+ CS + + Y + ++R+ Q+++ D F DQ+AL+ TN D+IV++R A FF I F DD GR+ ++ + S E E KY+ LM ++ L +ST+ L+ +MS LF ++ D+ R Q+ N++++ I A ++ + + I L E+ + Sbjct: 397 ISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD--------------DPKYGRMDTFQIFQSPWACSDE-DEKKYNDLMKKIFDLQLDEISTV--LISMMS---LFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQV 613
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Match: EMLSAG00000006454 (supercontig:LSalAtl2s:LSalAtl2s3535:4892:6220:-1 gene:EMLSAG00000006454 transcript:EMLSAT00000006454 description:"maker-LSalAtl2s3535-snap-gene-0.8") HSP 1 Score: 57.3806 bits (137), Expect = 3.859e-9 Identity = 33/94 (35.11%), Postives = 46/94 (48.94%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSI--QSKASSNYTCRRQGK---------CQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRR 240 CRVC + + HYG+ C CRAFFRR + Q K + C C + L R CQ CR+ CL GM P+ VL++E+ ++ Sbjct: 28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|116242681|sp|Q5BIS6.2|NR1H2_BOVIN (RecName: Full=Oxysterols receptor LXR-beta; AltName: Full=Liver X receptor beta; AltName: Full=Nuclear receptor subfamily 1 group H member 2) HSP 1 Score: 92.4337 bits (228), Expect = 1.634e-18 Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 109 PSSPSCSGGDGDDD------GTEPDVPQGEDGEAHSVLLV---------KKARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEE 235 PS+PS S G +D G +PDVP + ++ SV+++ K+ + P + E C+VCG+ A+ HY ++C C+ FFRRS+ + Y CR G CQ+ R+ CQ+CR KC AGM+ VLS+E Sbjct: 18 PSTPSSSPGGKEDGPEPCPGGADPDVPSTDGADSASVVVILDTAEEPERKRKKGPAPKMLGDELCQVCGDTASG-FHYNVLSCEGCKGFFRRSVIRGGAGRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSKE 158
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|10720386|sp|Q60644.1|NR1H2_MOUSE (RecName: Full=Oxysterols receptor LXR-beta; AltName: Full=Liver X receptor beta; AltName: Full=Nuclear receptor subfamily 1 group H member 2; AltName: Full=Retinoid X receptor-interacting protein No.15; AltName: Full=Ubiquitously-expressed nuclear receptor) HSP 1 Score: 87.4261 bits (215), Expect = 5.776e-17 Identity = 46/125 (36.80%), Postives = 66/125 (52.80%), Query Frame = 0 Query: 121 DDGTEPDVPQGEDGEAHSVLLV----------KKARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEE 235 ++G E D P G +G + + ++V K+ + P + E CRVCG+ A+ HY ++C C+ FFRRS+ + Y CR G CQ+ R+ CQ CR KC AGM+ VLSEE Sbjct: 31 EEGQETDPPPGSEGSSSAYIVVILEPEDEPERKRKKGPAPKMLGHELCRVCGDKASG-FHYNVLSCEGCKGFFRRSVVHGGAGRYACRGSGTCQMDAFMRRKCQLCRLRKCKEAGMREQCVLSEE 154
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|13124670|sp|Q62755.1|NR1H2_RAT (RecName: Full=Oxysterols receptor LXR-beta; AltName: Full=Liver X receptor beta; AltName: Full=Nuclear receptor subfamily 1 group H member 2; AltName: Full=Orphan nuclear receptor OR-1; AltName: Full=Ubiquitously-expressed nuclear receptor; Short=UR) HSP 1 Score: 87.0409 bits (214), Expect = 7.694e-17 Identity = 46/125 (36.80%), Postives = 65/125 (52.00%), Query Frame = 0 Query: 121 DDGTEPDVPQGEDGEAHSVLLV----------KKARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEE 235 ++G E D P G +G + + ++V K+ + P + E CRVCG+ A HY ++C C+ FFRRS+ + Y CR G CQ+ R+ CQ CR KC AGM+ VLSEE Sbjct: 31 EEGQETDPPPGSEGSSSAYIVVILEPEDEPERKRKKGPAPKMLGHELCRVCGD-KASGFHYNVLSCEGCKGFFRRSVVHGGAGRYACRGSGTCQMDAFMRRKCQLCRLRKCKEAGMREQCVLSEE 154
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|10720385|sp|Q20765.2|NHR7_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-7) HSP 1 Score: 85.8853 bits (211), Expect = 2.779e-16 Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = 0 Query: 154 TTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKK 248 T C VCG+ AK +HYG + CF C+ FFRR+++ + Y CR + C+V R C+ CR+ KCLL GM P +V + E+S++ + KK Sbjct: 5 TNRICAVCGDTPAK-IHYGVLACFGCKGFFRRAVKD-GRNKYVCRFEKNCEVTKFERNACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKK 97
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|296439251|sp|P55055.2|NR1H2_HUMAN (RecName: Full=Oxysterols receptor LXR-beta; AltName: Full=Liver X receptor beta; AltName: Full=Nuclear receptor NER; AltName: Full=Nuclear receptor subfamily 1 group H member 2; AltName: Full=Ubiquitously-expressed nuclear receptor) HSP 1 Score: 83.1889 bits (204), Expect = 1.413e-15 Identity = 56/154 (36.36%), Postives = 75/154 (48.70%), Query Frame = 0 Query: 108 HPSSPSCS------GGDGDDDGTEPDVP-QGEDGEAHSVLLV----------KKARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEE-RSRRFRK 243 P +PS S G + G +PDVP E A S V K+ + P + E CRVCG+ A HY ++C C+ FFRRS+ + Y CR G CQ+ R+ CQ+CR KC AGM+ VLSEE+ R ++ RK Sbjct: 20 QPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGD-KASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRK 172
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|75060925|sp|Q5E9B6.1|NR1H3_BOVIN (RecName: Full=Oxysterols receptor LXR-alpha; AltName: Full=Liver X receptor alpha; AltName: Full=Nuclear receptor subfamily 1 group H member 3) HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15 Identity = 67/197 (34.01%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 87 DEQDINTNDLQDMR-LSHEESSHPSSPSCSGGDGDDDGTEPDVPQ----GEDGEAHSVLLVKKARKDNPL--LSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKARQGSQASSPGHRSDDSSNPDPLPDSGP 276 D QD ++ L + + EESS P S GD G E P G + S L + RK P + E C VCG+ A+ HY ++C C+ FFRRS+ A Y C G C + R+ CQ+CR KC AGM+ VLSEE+ R +K + ++ Q S+P SS P LP P Sbjct: 24 DAQDASSQPLGSSKCILREESSTPQS----AGDTSRMGLEAPEPTALLPGVEAPPESTELRPQKRKKGPAPKMLGNELCSVCGDKASG-FHYNVLSCEGCKGFFRRSVIKGA--RYVCHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQ--IRLKKMKRQEEEQAQATSAPPR---ASSPPQVLPQLSP 208
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|10720139|sp|Q9XTJ4.1|NHR3_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-3) HSP 1 Score: 82.4185 bits (202), Expect = 2.490e-15 Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRF---RKTREKKARQGSQASSPGHR---------SDD-SSNPDPLPDSGPMDASPWVPD 285 C VC + A+ HYG V CF C+ FFRR++ +A NY CR KC++ R C+ CR+ KCL GM+P + + +++ R R+ E ++ S S G SDD +++P DS PMD P D Sbjct: 53 CSVCCDEASGR-HYGVVACFGCKGFFRRTV--RAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKTGRQKNPRRNTEGSIKKVSVGSILGDLPCLNKFKDDSDDAATSPSSRADSAPMDLRPSFID 190
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|135713|sp|P18117.1|THBA_XENLA (RecName: Full=Thyroid hormone receptor beta-A; Short=TRbetaA; Short=xTR; AltName: Full=Nuclear receptor subfamily 1 group A member 2-A) HSP 1 Score: 81.2629 bits (199), Expect = 3.706e-15 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0 Query: 152 LSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEER---SRRFRKTREKKARQGSQAS 256 L E C VCG+ A + HY +TC C+ FFRR+IQ +Y+C+ +GKC + +R CQ+CR+ KC+ GM VL + +R + + REK+ + Q S Sbjct: 13 LDKDELCVVCGDKATGY-HYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDNKRLAKRKLIEENREKRRKDEIQKS 119
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 80.8777 bits (198), Expect = 4.866e-15 Identity = 42/129 (32.56%), Postives = 66/129 (51.16%), Query Frame = 0 Query: 152 LSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEER---SRRFRKTREKKARQGSQASSPGHRSDDSSNPDPLPDSGPM 277 L E C VCG+ A + HY +TC C+ FFRR+IQ +Y+C+ +GKC + +R CQ+CR+ KC+ GM VL + +R + + REK+ + Q + P+P P+ + Sbjct: 13 LDKDELCVVCGDKATGY-HYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENREKRRKDELQKTL-------VQKPEPTPEEWEL 133
BLAST of vitamin d3 receptor-like vs. SwissProt
Match: gi|75063008|sp|Q6QMY5.1|ERR1_CANFA (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 80.1073 bits (196), Expect = 1.089e-14 Identity = 46/124 (37.10%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKARQGSQASSPGHRSDDSSNPDPLPDSGPMDASP 281 C VCG++A+ + HYG +C +C+AFF+R+IQ S Y+C +C++ + RK CQ CR+ KCL GM L E R R R R+K R+ DPLP G A P Sbjct: 79 CLVCGDVASGY-HYGVASCEACKAFFKRTIQ--GSIEYSCPASNECEITKRRRKACQACRFTKCLRVGM-----LKEGVRLDRVRGGRQKYKRR--------------PEVDPLPFPGSFPAGP 180
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0 Identity = 315/640 (49.22%), Postives = 407/640 (63.59%), Query Frame = 0 Query: 85 MEDEQDINTNDLQDMRLSHEES---SHPSSPSCSGGDGDDDGTEPDVPQGEDGEAHSVLLVKKARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKARQGS-----QASSPGHRSDDSSNPDPLPDSGPMD--------ASPWVPDPVG----AQPGSSDK-SSLPMESSNCSTGQSSMAQCYDNPESRHKNSP---LLDESMANCLGGAQGS---------------PITGQPFAQKRAWQM--DVPPSGPSTSTLAKFVPTTSVST---------------SSGIPYGPIMPITEEEVIQIRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMTAYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATGTLGRIHYRNYNSIQQLDHEPTENKYSMLMTRVGSLVSTIPDLVKIMSYVLLFCPDYCELEDKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLIKRKRPLAKPTSNSPPRLNSPP---AMPSSTATTGS 665 ME+ D D QD H ++ H S G D G P + D HS KK +K+NPL+S TEKCRVCGE AA+HVHYGSVTCFSCRAFFRRSIQ+KA +NY+CRRQG+C++MLKSRKNCQKCRY++CL AGMKPTWVLSEEERSRRFRKTREKKARQ S + S P + + D +P S +D S D G A+ S+ K LP ++ S MA + R +P + +M + QG+ P G ++ K+A M D P+ T+ ++ S GIP P M ++E+E+IQIR++ YE+DK YRSVAFGE+LIK++VMCSV+ +PL P AMTAYRLMIQRV +VA F+ F LD Q+AL+KTNADL+VSLRG VFFDEKKKG+DQILFSLGVDDV+L K +LM+T+KATG+LGRI Y+NYNSIQ+L TE++Y+ L++RVGS++S +P+LV +M+YVLL CPDYCELED+ +V+ +QQMM++M +R++++Q+P+ IA + QVL C+ DLRELTLIKRKRPLAKP + SPP + P + P AT GS Sbjct: 16 MEETIDDTFMDCQDATEPHLDNLDPDHTSEDEEYMGGFSDPGEGPS--EQNDVRMHSS--GKKCKKENPLISDTEKCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRKSNEGSEPETNNGQGNEDDQIPGSSKLDTRTHSTLHGSTHAFDNSGRIIEAEALSAPKPGHLPPSANQAVMVSSGMAHNW----GRCSKTPPNVMFTPAMEALIKSKQGNDSSSGLVQQMSLGRDPTAGASYSFKQADLMFYDYNPTRKDTNRSPSTCSSSRSPYSSRSYSPHEAFPQRFSPGIPLEPQMTVSEDEIIQIRRLSYEHDKFYRSVAFGEELIKELVMCSVFGLPLSPNQAMTAYRLMIQRVTKVAQGFEPFNRLDRHAQKALLKTNADLMVSLRGGVFFDEKKKGIDQILFSLGVDDVDLAKRMLMTTLKATGSLGRIEYKNYNSIQELGDNDTEHRYNALLSRVGSVISLVPELVNVMAYVLLLCPDYCELEDRRKVEGLQQMMIHMTKRLLESQYPTHIAMNVFPQVLSCVSDLRELTLIKRKRPLAKPITKSPPHIPETPTCESSPEEQATAGS 647
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|657600358|gb|AID52840.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 259.61 bits (662), Expect = 2.352e-74 Identity = 123/264 (46.59%), Postives = 187/264 (70.83%), Query Frame = 0 Query: 394 ITEEEVIQIRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMTAYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATG-TLGRIHYRNYNSIQQLDHEPTENKYSMLMTRVGSLVSTIPDLVKIMSYVLLFCPDYCELEDKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLIKRKRPLAKP----TSNSPPRLNS 652 ITE+EV+ ++++ Y +D Y+SVAFGE+L+K +VM S + IPL P M AYRLMIQRV +VA FD F+ L DQ L+K+NADL+VSL+GAVFFD++ G+DQILFS+G+DD+E+ K ++MST K G + RI Y++YN+IQ+L+ P E +Y L+ ++G ++++ P L K+++YV+L CP+ C+L + +VQ++Q ++N+ ++MI AQ ++A + +V I LREL ++K+KRPL P T NSPP + S Sbjct: 302 ITEDEVLLLQKLEYIHDHNYQSVAFGEELVKALVMTSAFGIPLTPSQTMMAYRLMIQRVTKVAQGFDEFRDLPLEDQTTLLKSNADLMVSLKGAVFFDKRNMGIDQILFSMGLDDIEMAKRMIMSTSKTAGCKMNRIDYKSYNTIQELNDTPDEERYQWLLAQIGDVITSFPSLTKVLTYVVLLCPEDCQLIQRDKVQSMQYTIMNLTRKMIFAQHNYEVATNIYGRVTNIIDYLRELMVLKKKRPLTNPVHQATDNSPPSIRS 565 HSP 2 Score: 128.257 bits (321), Expect = 2.054e-27 Identity = 52/95 (54.74%), Postives = 75/95 (78.95%), Query Frame = 0 Query: 155 TEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKA 249 TE+C++C + A +H+HYG++TCFSC+AFFRR+ QSKA + C+ G+C V+ K RK C+KCRY+KC+ GMKP+ VLS+EE+ +RF+K+ KKA Sbjct: 26 TEECQICQDPAIRHLHYGAITCFSCKAFFRRTSQSKAYQKFMCKSTGECNVLHKLRKKCRKCRYEKCIRVGMKPSLVLSDEEKIKRFKKSLSKKA 120
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 191.815 bits (486), Expect = 1.517e-48 Identity = 93/250 (37.20%), Postives = 154/250 (61.60%), Query Frame = 0 Query: 390 PIMPITEEEVIQIRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMTAYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATGTLGRIHYRNYNSIQQLDHEPTENKYSMLMTRVGSLVSTIPDLVKIMSYVLLFCPDYCELEDKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLIKRKRPL 639 P + T +E ++ + +++ YRSV FGE+LIK+M+ CS++SIP+ A+T YRL+++R+ ++AN + FK L DQ AL+K NA+L+VSLRGA+FFD +K G Q++ S+G DD++ E + S + T+ I Y+ +NSIQ + P E++Y+ L +VG +++ + +++Y +LF PD+C L + V Q M L M+ R I ++ P A+ ++ VL I +RE+ IK R + Sbjct: 428 PEIIFTPDEAEILKNVVESHNERYRSVNFGEELIKEMIFCSMFSIPVSTQAAITGYRLIVERITRIANHQEAFKQLSNEDQGALLKENANLLVSLRGAIFFDSQKNGAQQVMLSMGEDDIQT-IENMFSKLLREDTMKHIDYKTFNSIQAIGLSPKEDRYNYLQEKVGKVLND-ETISILLTYTVLFSPDFCSLTNSREVYRTQSMYLKMLYRYIYSKHPRHAARLKLANVLDVITCIREMAEIKELRAI 675 HSP 2 Score: 159.844 bits (403), Expect = 1.399e-37 Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 0 Query: 151 LLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREK 247 LLS TEKC++C E AAKH+HYG++TCFSCRAFFRRSIQ+K +++YTCRR C++ L++RKNCQ CRY KCL GMK WVLSEEER RRFRK RE+ Sbjct: 34 LLSPTEKCKICNEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFRKVRER 130
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|657600352|gb|AID52837.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 139.428 bits (350), Expect = 1.223e-31 Identity = 76/238 (31.93%), Postives = 136/238 (57.14%), Query Frame = 0 Query: 402 IRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMTAYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATGTLGRIHYRNYNSIQQLDHEPTENKYSMLMTRVGSLVSTIPDLVKIMSYVLLFCPDYCELE--DKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLIKRKR 637 I++I YD+ + SV+ GE +IK+M++ S+Y +P+ ++++AYRLM+ RV ++AN FD F L AL+K NAD +V + GA FF E DQI SLG +D E ++ + K+ + I Y N+NSIQ + E +S M R+G+L+ P ++K+ S+V+L + EL+ + Q +L++++R + + +A ++ +++ + DLR ++++ R Sbjct: 213 IQKITCIYDQQFLSVSLGEVIIKEMIVSSLYDVPISVSSSLSAYRLMVSRVTKIANSFDTFFNLPIQTGMALLKKNADPMVLVNGATFFSESAS--DQIQVSLGAEDKEASMLLIDRSEKSIKSAKAITYWNWNSIQCQHDQDVEEMFSQNMERLGNLLDHNPTILKVFSFVVLLSTEGVELDPGSLTEIAGCQLALLHVLERYLHRLYGPTMAGSIFGSLVKAMSDLRSMSIVNATR 448 HSP 2 Score: 120.168 bits (300), Expect = 4.011e-25 Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 0 Query: 144 KARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKARQGSQASSPGHRSDDSSNPDPLPDSGPMDASPWVPDPVGAQ 290 K++K + + +EKCRVC E A +H+HYG++ CFSC+AFFRR+IQ+ + C GKC++ SRK+CQKCR++ CL GM WVLS+EER R + R+ SQ S P+SG D P PV Q Sbjct: 22 KSKKASSQVEFSEKCRVCKEPATRHLHYGAIVCFSCKAFFRRAIQNNVYKFFNCSVDGKCEMNSISRKHCQKCRWEACLKVGMNANWVLSKEERLDRLNR------RRVSQVS---------------PESGEFD-----PAPVNVQ 142
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|657600354|gb|AID52838.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 139.813 bits (351), Expect = 2.880e-31 Identity = 127/518 (24.52%), Postives = 222/518 (42.86%), Query Frame = 0 Query: 144 KARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKARQGSQASSPGHRSDDSSNPDPLPDSGPMDASPWVPDPVGAQPGSSDKSSLPMESSNC--------STGQSSMAQCYDNPESRHKNSP--LLDESMA-------NCLGGAQGSPI------TGQ----PFAQKRAWQMDVPPSGPSTSTLAKFVPTTSVSTSSGIPYGPIMPITEEEVIQIRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMT-AYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATGTLGRIHYRNYNSIQQLDHEPTENKYSMLMTRVGSLVSTIPDLVKIMSYVLLFCPDYCELEDKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLI 633 K ++ P C+VCG++A H+HYG++ C+SCRAFFRR + + A Y C + C + +RK+CQ CR+ KC+ GM+ +WV++EE++ + K R K+ + + S G S+ D GP S P G++ S +S S S+ M+ C + +S H +P E A +C G Q + + +G+ P +Q + P++ K + V T++ I PI+P T EE + I +S+ +++ M+ + + PY+A+ Y ++R+ Q + D F+ DQR L+ N D+IV+LR A QI + G + E ++M R+ Y+ E E +++ LM + L +M+ ++LF Y EL+D R Q+ ++ R + + + A ++ + + I L E++ I Sbjct: 48 KPKRKRPKFIRKVVCKVCGDVANDHIHYGAIACYSCRAFFRRGVNANAP--YYCSQSKSCPITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKQEKKEKARLKRVSKVGKDS--GSLSESGLVADYDEHGGPTVCS---SPPYGSRNHFSPESHHAPHQSQVYCHEDQYHSSEDPQMSYCSGSRDSLHSPTPSSAFSEYPAASHTPPFDCSTGGQNALLGMDRCASGEGGESPINDAEGYQSSMEYVSPASPIEMKPDISFFVDTANIIRDQPILPFTSEETFLVENIINTEVATTQSIPVNPEVLMGMIEAAKNGTVI-PYSALVEGYTTCMRRIIQFVSKLDFFQSFVLPDQRDLLLHNTDMIVNLRSARLLRPGINLQAQINHATGGPSL----ENTTTSMDLFQCPERLEYKQIFQSPWACDEKHEAQFASLMENLFHL-EMDRTTTTLMAMIVLFSTSYAELKDSHRAVQNQEFFTQLLYRYLGSMIGRKNAIKLLPKYMHLISQLEEMSQI 552
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|1325265241|ref|XP_023336689.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis]) HSP 1 Score: 119.398 bits (298), Expect = 2.612e-24 Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 0 Query: 132 EDGEAHSVLLVKKARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTC-RRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFR-KTREKKARQGSQASSPGHRS 262 E+G+ S + K + + +L C+VCGE A KH +YG C SCRAFFRRS+QS+ + + C R C + L +RKNCQ CRY KCL GM+P+W+LSEEER RRF +T+ K QG + + G + Sbjct: 158 EEGKKSSPVSPFKRERSSRILCENPVCQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEEERIRRFHGRTKGKGKEQGDGSDNSGRNT 290
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|657600360|gb|AID52841.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 117.087 bits (292), Expect = 5.977e-24 Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = 0 Query: 124 TEPDVPQGED-GEAHSVLLVKKARKDNPLLSTTEKCRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKAR 250 ++PD P +D GE KK R+ +P C VCG+ A H HYG + CFSCRAFFRRS+ YTC C V +RKNCQKCR+DKC+ AGMK +WVLS+EE+ R K R +K + Sbjct: 97 SQPDFPSLKDKGE-------KKKRRSSP---KHLSCHVCGDRAPNHCHYGGIACFSCRAFFRRSV--PKYDTYTCSSSSNCVVTPATRKNCQKCRFDKCVEAGMKASWVLSDEEKLERLEKKRSRKGQ 212
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|1325280017|ref|XP_023324670.1| (uncharacterized protein LOC111698547 [Eurytemora affinis]) HSP 1 Score: 116.316 bits (290), Expect = 1.390e-23 Identity = 45/91 (49.45%), Postives = 67/91 (73.63%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSI--QSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTRE 246 CR+CG+ A +HVHYG CFSC+AFFRR++ Q+K + C+ + C++ +K+RK CQ CR+ KC+ GM P+WVLS+++R +RF+K RE Sbjct: 41 CRICGDGAVRHVHYGGHCCFSCKAFFRRAVNWQTKNKRTFQCKFESGCEINIKNRKTCQSCRFQKCITTGMNPSWVLSDDQRKKRFKKYRE 131
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|1238896772|ref|XP_022235203.1| (vitamin D3 receptor-like [Limulus polyphemus]) HSP 1 Score: 114.005 bits (284), Expect = 4.078e-23 Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKARQGSQASSPGHRSDDSSNPDP 270 C VCG+ AK H+G ++C SC+AFFRRS+Q++ N+ C +GKC + + SRK CQ CR+ KCL GM+ WV++EEER R EK+ RQG+ S R S+ DP Sbjct: 31 CGVCGD-RAKSYHFGGISCDSCKAFFRRSVQNEGYKNFHCPYEGKCDITISSRKCCQYCRFQKCLAIGMEKGWVMTEEERLHLLRSRMEKRQRQGTTESDKPRRKTSVSDYDP 142
BLAST of vitamin d3 receptor-like vs. nr
Match: gi|657600364|gb|AID52843.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 112.079 bits (279), Expect = 2.268e-22 Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 0 Query: 158 CRVCGEIAAKHVHYGSVTCFSCRAFFRRSIQSKASSNYTCRRQGKCQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKK 248 C VCG+IA HVHYG++ C+SCRAFFRRS+ ++A +Y C R KC V ++RK+CQ CR+ KC+ GMKP+WV++E+ER K +KK Sbjct: 60 CSVCGDIANDHVHYGAIACYSCRAFFRRSVSNEA--HYECSRNSKCPVTKETRKHCQSCRFKKCIDIGMKPSWVMTEDERKDNRAKILKKK 148 The following BLAST results are available for this feature:
BLAST of vitamin d3 receptor-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of vitamin d3 receptor-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of vitamin d3 receptor-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold188_size271682:151507..154422+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold188_size271682-snap-gene-1.24 ID=maker-scaffold188_size271682-snap-gene-1.24|Name=vitamin d3 receptor-like|organism=Tigriopus kingsejongensis|type=gene|length=2916bp|location=Sequence derived from alignment at scaffold188_size271682:151507..154422+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'vitamin d3 receptor-like' has the following synonyms
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