corepressor interacting with rbpj 1, maker-scaffold282_size228295-snap-gene-1.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of corepressor interacting with rbpj 1 vs. L. salmonis genes
Match: EMLSAG00000004455 (supercontig:LSalAtl2s:LSalAtl2s231:965916:966836:-1 gene:EMLSAG00000004455 transcript:EMLSAT00000004455 description:"augustus_masked-LSalAtl2s231-processed-gene-9.8") HSP 1 Score: 328.946 bits (842), Expect = 8.211e-114 Identity = 150/198 (75.76%), Postives = 177/198 (89.39%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGE-ESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALDSEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQML 197 MGKG+NNYMCKKFFHPAS+DNLKRVWMA+Q+T+AE+KKQDDL+QQYEREQELYNN+ALLSK+SKEKL +NF+YEPPPGA++ D++ +D + E +KFEWQ KWG+APRES+ KGDESI DQPFGI VRNVRCVKCHKYGHINTDKECP+YGKALD+EAP IDQ++LL+EMK+DGMKMRWSAWDI SS Y M+ Sbjct: 1 MGKGYNNYMCKKFFHPASRDNLKRVWMAEQRTEAEKKKQDDLRQQYEREQELYNNKALLSKESKEKLGLNFMYEPPPGAKRADKKDDDQDGEPQYKFEWQAKWGSAPRESYCKGDESIMDQPFGILVRNVRCVKCHKYGHINTDKECPLYGKALDAEAPVGSIDQKKLLQEMKDDGMKMRWSAWDI----KSSNYNMV 194
BLAST of corepressor interacting with rbpj 1 vs. SwissProt
Match: gi|82080931|sp|Q5ZI03.1|CIR1_CHICK (RecName: Full=Corepressor interacting with RBPJ 1; AltName: Full=CBF1-interacting corepressor) HSP 1 Score: 213.772 bits (543), Expect = 2.605e-65 Identity = 112/246 (45.53%), Postives = 160/246 (65.04%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYG------KALDSEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEMEQKRRMIQSLSKDEKRKLLKKLER 240 MGK F N+MCKK FHPASK N+K+VWMA+QK ++KKQ++L QQY +EQE Y+NR LL D + K +NF+YE PPGA+KE+ + ++GE + +KFEWQ+ APRE +AK D +IRDQPFGIQVRNVRC+KCHK+GH+NTD+ECP++G ++ S+ + L+ EM+ G ++ + + DP + D + E+E ++SLS +K+KLL+KL+R Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNR-LLMGDERVKNGLNFMYEAPPGAKKEEAKEQEGE-TEYKFEWQK---VAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVSSDGSGPSMHPSELIAEMRNSGFALKQNVL--------GRNLTANDPSQEFVASEGDD-DPEVE----FLKSLSTKQKQKLLRKLDR 228
BLAST of corepressor interacting with rbpj 1 vs. SwissProt
Match: gi|81883502|sp|Q5U2T8.1|CIR1_RAT (RecName: Full=Corepressor interacting with RBPJ 1; AltName: Full=CBF1-interacting corepressor) HSP 1 Score: 190.66 bits (483), Expect = 1.907e-56 Identity = 109/249 (43.78%), Postives = 158/249 (63.45%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFK-FEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYG------KALDSEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEMEQ--KRRMIQSLSKDEKRKLLKKLER 240 MGK F N+MCKK FHPASK N+K+VWMA+QK ++KKQ++L QQY +EQE Y+NR LL D + K +NF+YE PPG +KE++E+E+ E FEWQ+ APRE +AK D +IRDQPFGIQVRNVRC+KCHK+GH+NTD+ECP++G ++ ++ + L+ EM+ G ++ + + DP D + S+ E+ + ++SL+ +K+KLL+KL+R Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNR-LLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQK---GAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVL--------GRNLTANDPS-------QDYVASDGEEDPEVEFLKSLTTKQKQKLLRKLDR 230
BLAST of corepressor interacting with rbpj 1 vs. SwissProt
Match: gi|269849550|sp|Q9DA19.2|CIR1_MOUSE (RecName: Full=Corepressor interacting with RBPJ 1; AltName: Full=CBF1-interacting corepressor) HSP 1 Score: 190.274 bits (482), Expect = 2.211e-56 Identity = 109/249 (43.78%), Postives = 158/249 (63.45%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFK-FEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYG------KALDSEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEMEQ--KRRMIQSLSKDEKRKLLKKLER 240 MGK F N+MCKK FHPASK N+K+VWMA+QK ++KKQ++L QQY +EQE Y+NR LL D + K +NF+YE PPG +KE++E+E+ E FEWQ+ APRE +AK D +IRDQPFGIQVRNVRC+KCHK+GH+NTD+ECP++G ++ ++ + L+ EM+ G ++ + + DP D + S+ E+ + ++SL+ +K+KLL+KL+R Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNR-LLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQK---GAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVL--------GRNLTANDPS-------QDYVASDCEEDPEVEFLKSLTTKQKQKLLRKLDR 230
BLAST of corepressor interacting with rbpj 1 vs. SwissProt
Match: gi|74727790|sp|Q86X95.1|CIR1_HUMAN (RecName: Full=Corepressor interacting with RBPJ 1; AltName: Full=CBF1-interacting corepressor; AltName: Full=Recepin) HSP 1 Score: 189.119 bits (479), Expect = 6.965e-56 Identity = 96/186 (51.61%), Postives = 132/186 (70.97%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFK-FEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYG------KALDSEAPADRIDQQRLLEEMKEDGMKMR 179 MGK F N+MCKK FHPASK N+K+VWMA+QK ++KKQ++L QQY +EQE Y+NR LL D + K +NF+YE PPGA+KE++E+E+ E FEWQ+ APRE +AK D +IRDQPFGIQVRNVRC+KCHK+GH+NTD+ECP++G ++ ++ + L+ EM+ G ++ Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNR-LLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQK---GAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALK 182
BLAST of corepressor interacting with rbpj 1 vs. SwissProt
Match: gi|75248513|sp|Q8VZ67.1|Y4919_ARATH (RecName: Full=Uncharacterized zinc finger CCHC domain-containing protein At4g19190) HSP 1 Score: 74.7146 bits (182), Expect = 5.594e-14 Identity = 50/199 (25.13%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 6 NNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLE----VNFLYEPPPGARKED---REREDGEESGFKFEWQ-----RKWGTAPRESWAKGDES------------------------------------IRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALDSE 156 ++++ +K +HP S N +R W+A+Q ++ +++ +++ +EQE + AL+SK +EK+E V+F+Y PPG E E +D + G Q G+ P ES G+ + R +PF ++VRNV+C++C +GH + D++CP+ + +E Sbjct: 40 HSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNE 238
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|1061124683|ref|XP_017887585.1| (PREDICTED: corepressor interacting with RBPJ 1 [Ceratina calcarata]) HSP 1 Score: 277.715 bits (709), Expect = 4.894e-88 Identity = 144/250 (57.60%), Postives = 186/250 (74.40%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALD------SEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEMEQKRRMIQSLSKDEKRKLLKKLEREDRK 244 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+Q+ +A +KKQ++L+ QYE+EQ+L+NN+ALLSK+SK+KL VNF+YEPPPGA+KE RE+ED E +KFEWQRK+ APRES+ KGD IRDQPFGIQVRNVRC+KCHK+GHINTDKECP+Y +A+ S+ P D L+ +M+EDG+ ++ SA S Q L P+ D+ +SEM + +++LSK +K KLLKKLER +R+ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRVQYEKEQDLHNNKALLSKESKDKLSVNFMYEPPPGAKKE-REKEDNEPE-YKFEWQRKY-NAPRESYCKGDSEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPLYSQAMSVVLANGSQTPCT-PDALTLVRQMREDGLALKKSAL--------SAQQHLRVPEHEHLMVSDDEEQSEM----KYLKALSKRDKVKLLKKLERLERR 234
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|1285020201|ref|XP_023022358.1| (corepressor interacting with RBPJ 1-like [Leptinotarsa decemlineata]) HSP 1 Score: 272.707 bits (696), Expect = 8.917e-88 Identity = 137/243 (56.38%), Postives = 181/243 (74.49%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALD---SEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEMEQKRRMIQSLSKDEKRKLLKKLER 240 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+QK +A +KKQ++L+QQYE+EQ+L++N+A+LSK+SK+KL +NF+YEPPPGARKE RERED E +KFEWQRK+ APRES+ KGD+ IRDQPFGIQVRNVRC+KCHK+GHINTDKECPMY ++ S A +DQ L+++M +DG+ ++ I+ ++ + ED + + A I+SL+K +KR LL+KLE+ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQKAEAYKKKQEELRQQYEKEQDLHDNKAMLSKESKDKLSINFMYEPPPGARKE-REREDNEPE-YKFEWQRKYN-APRESYCKGDQEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPMYSLSMSAARSLENATVLDQNSLVQQMLDDGLALK--KQHINTTEANKHLLVNEDVEENSEVA--------------FIKSLTKKQKRALLRKLEK 224
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|642934609|ref|XP_008197736.1| (PREDICTED: corepressor interacting with RBPJ 1 [Tribolium castaneum] >gi|270013741|gb|EFA10189.1| Corepressor interacting with RBPJ 1-like Protein [Tribolium castaneum]) HSP 1 Score: 269.24 bits (687), Expect = 1.536e-85 Identity = 124/182 (68.13%), Postives = 156/182 (85.71%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALD---SEAPADRIDQQRLLEEMKEDGMKMR 179 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+QK +A +KKQ++L+QQYE+EQ+L++N+A+LSK+SK+KL +NF+YEPPPGARKE RERED E +KFEWQRK+ APRES+ KGD+ IRDQPFGIQVRNVRC+KCHK+GHINTDKECPMY + S A +DQ+ L+E+M+EDG+ ++ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQKAEAYKKKQEELRQQYEKEQDLHDNKAMLSKESKDKLSINFMYEPPPGARKE-REREDNEPE-YKFEWQRKY-NAPRESYCKGDQEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPMYSLSTSVARSLESASILDQKSLVEQMREDGLAIK 179
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|665801638|ref|XP_008548840.1| (PREDICTED: corepressor interacting with RBPJ 1 [Microplitis demolitor]) HSP 1 Score: 269.626 bits (688), Expect = 3.523e-85 Identity = 137/244 (56.15%), Postives = 180/244 (73.77%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKA----LDSEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEMEQKRRMIQSLSKDEKRKLLKKLER 240 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+Q+ DA +KKQ++L+ QYE+EQ+L+NN+ALLSK+SK+KL VNF+YEPPPGA+KE RE+ED E +KFEWQRK+ APRES+ KGD IRDQPFGIQVRNVRC+KCHK+GHINTDKECP+Y +A + ++ + D L+++M++DG+ ++ SA + Q L PQ D+ SE SL+K EK++L++KLE+ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQADAYKKKQEELRVQYEKEQDLHNNKALLSKESKDKLSVNFMYEPPPGAKKE-REKEDNEPE-YKFEWQRKY-NAPRESYCKGDSEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPLYSQAMSVVMSNQEKQESPDALTLIQQMRDDGLALKKSAM--------TAQQHLRIPQHEDEMVSGDEEMSE----EAFFNSLTKKEKKRLIRKLEK 229
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|1133432983|ref|XP_019872571.1| (PREDICTED: corepressor interacting with RBPJ 1-like [Aethina tumida]) HSP 1 Score: 266.544 bits (680), Expect = 8.995e-85 Identity = 121/182 (66.48%), Postives = 155/182 (85.16%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALDSEAPADR---IDQQRLLEEMKEDGMKMR 179 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+QK DAE+K+Q++L+QQYE+EQ+L++N+A+LSK+SK+KL +NF+YEPPPGA+KE RERED E +KFEWQRK+ APRES+ KGD+ IRDQPFGIQVRNVRC+KCHK+GHINTDKECPMY ++ + + +DQ L+ +M EDG+ ++ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQKADAEKKRQEELRQQYEKEQDLHDNKAMLSKESKDKLSINFMYEPPPGAKKE-REREDNEPE-YKFEWQRKY-NAPRESYCKGDQEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPMYSLSMSAARSLENSTVLDQNSLVAQMLEDGLAIK 179
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|170050601|ref|XP_001861383.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167872184|gb|EDS35567.1| conserved hypothetical protein [Culex quinquefasciatus]) HSP 1 Score: 265.003 bits (676), Expect = 1.557e-84 Identity = 127/221 (57.47%), Postives = 171/221 (77.38%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMY------GKALDSEAPADRIDQQRLLEE-MKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLES 214 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+Q+ +A +KKQ++L+ QYE+EQEL++N+A+LS+DSK+KL VNF+YE PPG +KE RE E +E+ +KFEWQRK+ APRES+ KGD IRDQPFGIQVRNVRC+KCHK+GHINTDKEC MY K + SEA +++ ++ LE+ ++EDG+ M+ SA ++ ++ +Q++E+P Q D L+S Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRNQYEKEQELHDNKAILSRDSKDKLSVNFMYELPPGMKKEAREPEKTDEAEYKFEWQRKF-NAPRESYCKGDTEIRDQPFGIQVRNVRCIKCHKWGHINTDKECTMYSLSMSEAKKIHSEAEGNQVLSKKNLEQGLREDGLAMKRSACEL-----ATAHQLVEEPGLDKVQTETDFLKS 215
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|951554925|ref|XP_014476969.1| (PREDICTED: corepressor interacting with RBPJ 1 [Dinoponera quadriceps]) HSP 1 Score: 266.929 bits (681), Expect = 1.877e-84 Identity = 124/190 (65.26%), Postives = 159/190 (83.68%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKAL------DSEAPADRIDQQRLLEEMKEDGMKMRWSAWD 184 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+Q+ +A +KKQ++L+ QYE+EQ+L+NN+ALLSK+SK+KL VNF+YEPPPGA+KE RE+ED E +KFEWQRK+ APRES+ KGD IRDQPFGIQVRNVRC+KCHK+GHINTDKECP+Y +A+ +S+ P+ D L+++M+EDG+ ++ SA D Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRVQYEKEQDLHNNKALLSKESKDKLSVNFMYEPPPGAKKE-REKEDNEPE-YKFEWQRKYN-APRESYCKGDSEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPLYSQAMSVVMANNSQTPS-APDTMTLVQQMREDGLALKKSALD 186
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|645004375|ref|XP_008208930.1| (PREDICTED: corepressor interacting with RBPJ 1 [Nasonia vitripennis]) HSP 1 Score: 265.003 bits (676), Expect = 4.493e-84 Identity = 129/224 (57.59%), Postives = 170/224 (75.89%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALD--------SEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEM 216 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+Q+ +A +KKQ++L+ QYE+EQ+L+NN+ALLSK+SK+KL VNF+YEPPPGA+KE RE+ED E +KFEWQRK+ APRES+ KGD IRDQPFGIQVRNVRC+KCHK+GHINTDKECP+Y +A+ +E P D +L+++M++DG+ ++ SA + Q L PQ + + D+ +SE+ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRMQYEKEQDLHNNKALLSKESKDKLSVNFMYEPPPGAKKE-REKEDNEPE-YKFEWQRKY-NAPRESYCKGDSEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPLYSQAMSVVLANNNGAEEPQPAPDALKLVQQMRDDGLALKKSALNAQ--------QHLSVPQHQDQMVSEDEEQSEV 213
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|1227104752|gb|OXU27591.1| (hypothetical protein TSAR_008121 [Trichomalopsis sarcophagae]) HSP 1 Score: 265.003 bits (676), Expect = 4.901e-84 Identity = 129/224 (57.59%), Postives = 170/224 (75.89%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALD--------SEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDPQARARQARADKLESEM 216 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+Q+ +A +KKQ++L+ QYE+EQ+L+NN+ALLSK+SK+KL VNF+YEPPPGA+KE RE+ED E +KFEWQRK+ APRES+ KGD IRDQPFGIQVRNVRC+KCHK+GHINTDKECP+Y +A+ +E P D +L+++M++DG+ ++ SA + Q L PQ + + D+ +SE+ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRMQYEKEQDLHNNKALLSKESKDKLSVNFMYEPPPGAKKE-REKEDNEPE-YKFEWQRKY-NAPRESYCKGDSEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPLYSQAMSVVLANNNGAEEPQPAPDALKLVQQMRDDGLALKKSALNAQ--------QHLSVPQHQDQMVSEDEEQSEV 213
BLAST of corepressor interacting with rbpj 1 vs. nr
Match: gi|546686493|gb|ERL95715.1| (hypothetical protein D910_00153 [Dendroctonus ponderosae] >gi|546687391|gb|ERL96116.1| hypothetical protein D910_01091 [Dendroctonus ponderosae]) HSP 1 Score: 262.307 bits (669), Expect = 5.169e-84 Identity = 123/182 (67.58%), Postives = 155/182 (85.16%), Query Frame = 0 Query: 1 MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQRKWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYGKALD---SEAPADRIDQQRLLEEMKEDGMKMR 179 MGKGFNNYMCKKFFHPAS+DNLKRVWMA+QK DA +KKQ++L+QQYE+EQ+L++N+A+LSK+SK+KL VNF+YEPPPGARKE RE+ED +E +KFEWQRK+ APRES+ KGD+ IRDQPFGIQVRNVRC+KCHK+GHINTDKECPMY ++ S A +D+ L+ +M EDG+ ++ Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQKADAYKKKQEELRQQYEKEQDLHDNKAMLSKESKDKLAVNFMYEPPPGARKE-REKED-DEPEYKFEWQRKY-NAPRESYCKGDQEIRDQPFGIQVRNVRCIKCHKWGHINTDKECPMYSLSMSAARSLETAAILDENSLVAQMLEDGLALK 179 The following BLAST results are available for this feature:
BLAST of corepressor interacting with rbpj 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of corepressor interacting with rbpj 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of corepressor interacting with rbpj 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold282_size228295:223243..226224+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold282_size228295-snap-gene-1.23 ID=maker-scaffold282_size228295-snap-gene-1.23|Name=corepressor interacting with rbpj 1|organism=Tigriopus kingsejongensis|type=gene|length=2982bp|location=Sequence derived from alignment at scaffold282_size228295:223243..226224+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'corepressor interacting with rbpj 1' has the following synonyms
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