h2b3_tigca ame: full, snap_masked-scaffold2014_size22653-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000001022 (supercontig:LSalAtl2s:LSalAtl2s116:679040:679821:-1 gene:EMLSAG00000001022 transcript:EMLSAT00000001022 description:"snap-LSalAtl2s116-processed-gene-6.25") HSP 1 Score: 190.66 bits (483), Expect = 3.503e-60 Identity = 94/109 (86.24%), Postives = 101/109 (92.66%), Query Frame = 0 Query: 259 EAQKNIAK-GDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 + QK+ K K+S KRKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVND+FERIA+E+SRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KVQKDAPKTAGXKRSHKRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDLFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 123
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000012399 (supercontig:LSalAtl2s:LSalAtl2s908:138075:138772:-1 gene:EMLSAG00000012399 transcript:EMLSAT00000012399 description:"augustus-LSalAtl2s908-processed-gene-1.13") HSP 1 Score: 62.003 bits (149), Expect = 9.065e-12 Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 0 Query: 129 SDRKNVDNKSKPMSATEELILKLQKENAELKSEK--LQLSHKLRKTRDEKNWLLKNKSVADNFFNPDEIQRLM--NKQARGKWSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRLANLHFKPGVLDEA 260 S+R N+ +K +SA K+Q A+L EK + LS K RK +K K+ + F N D+++ L K +R WS T+++A ++R ACG +G +L D FPLP TL R+ + F+ G+L++ Sbjct: 48 SNRINLVVANKSLSA------KIQHLQAKLAREKASIMLSKKNRKKISKKVAQFCRKTYIEGFLNKDQLRCLSKKGKNSRINWSSPTVKKAIKLRFACGSSGXESLLDPGFPLPSLRTLXRKTEGISFESGILNDV 177
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000009408 (supercontig:LSalAtl2s:LSalAtl2s5:396037:397780:1 gene:EMLSAG00000009408 transcript:EMLSAT00000009408 description:"augustus-LSalAtl2s5-processed-gene-4.4") HSP 1 Score: 59.3066 bits (142), Expect = 3.115e-10 Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0 Query: 182 NKSVADNFFNPDEIQRLMNKQARGK--WSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRL 247 +K+ A+ F N D+++ L K + K WS TI +A +++ ACG +GY TL D FPLP TL R+L Sbjct: 214 HKNYAEGFLNEDQLKYLAEKGKKSKIIWSSPTINKALKLKYACGSSGYETLLDQGFPLPSLRTLRRKL 281
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000004442 (supercontig:LSalAtl2s:LSalAtl2s231:730324:732262:-1 gene:EMLSAG00000004442 transcript:EMLSAT00000004442 description:"maker-LSalAtl2s231-augustus-gene-7.8") HSP 1 Score: 59.3066 bits (142), Expect = 5.192e-10 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0 Query: 148 ILKLQKENAELKSEKLQLSHKLRKTRDEKNWL---LKNKSVADNFFNPDEIQRLMNKQARG-KWSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTL--NRRLAN 249 + LQ +++ E+ +KLRK + + L L N+SV +F D+++ L RG WS+ TI+QA +++MACG GY L +FPLP STL N+R N Sbjct: 315 VTSLQTALSKVTKERDNYKNKLRKEKRKTKGLEKQLMNQSVIPSFLQDDQLKYLQKGSHRGFAWSEETIKQANELKMACGTRGYIALLMHNFPLPGLSTLRSNKRKEN 422
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000002305 (supercontig:LSalAtl2s:LSalAtl2s1434:21752:22588:-1 gene:EMLSAG00000002305 transcript:EMLSAT00000002305 description:"snap-LSalAtl2s1434-processed-gene-0.98") HSP 1 Score: 57.7658 bits (138), Expect = 5.977e-10 Identity = 30/76 (39.47%), Postives = 38/76 (50.00%), Query Frame = 0 Query: 189 FFNPDEIQRLMNKQARGK---WSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRLANLHFKPGVLDEAQ 261 FN D+IQ L K + K WS TI+ + Q+R CG +GY L + +PLP TL R L KPG E Sbjct: 140 LFNSDQIQFLSYKSSHSKIRLWSNKTIKNSLQLRFTCGTSGYQMLLNQGYPLPSNRTLQRNL-----KPGTSCEGH 210
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000007593 (supercontig:LSalAtl2s:LSalAtl2s438:546940:548109:-1 gene:EMLSAG00000007593 transcript:EMLSAT00000007593 description:"snap-LSalAtl2s438-processed-gene-5.12") HSP 1 Score: 53.1434 bits (126), Expect = 1.311e-8 Identity = 20/51 (39.22%), Postives = 34/51 (66.67%), Query Frame = 0 Query: 207 WSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRLANLHFKPGVL 257 +S TI+++ Q+R++CG +G+ L +PLP TL R L ++ F+PG+L Sbjct: 64 YSDKTIKKSLQLRLSCGTSGHQILISHGYPLPSNWTLQRNLKHIDFQPGIL 114
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000009860 (supercontig:LSalAtl2s:LSalAtl2s63:321294:323961:1 gene:EMLSAG00000009860 transcript:EMLSAT00000009860 description:"augustus-LSalAtl2s63-processed-gene-3.4") HSP 1 Score: 54.299 bits (129), Expect = 1.490e-8 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0 Query: 201 KQARGKWSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRLANLHFKPGVLDEAQK 262 K+ W+ STI++A ++R CG++GY+TL D +PLP TL R A+ VLDE K Sbjct: 255 KKTTRPWTISTIKKALKLRFTCGLSGYSTLIDQGYPLPSIRTLQRAFADNVLAIDVLDENDK 316
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Match: EMLSAG00000008125 (supercontig:LSalAtl2s:LSalAtl2s483:16257:17117:-1 gene:EMLSAG00000008125 transcript:EMLSAT00000008125 description:"snap-LSalAtl2s483-processed-gene-0.14") HSP 1 Score: 49.2914 bits (116), Expect = 3.308e-7 Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 0 Query: 189 FFNPDEIQRLMNK--QARGKWSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRLANLHFKPGV 256 F D+++ L K +R KW T++++ ++R ACG Y TL D FPLP TL R+ + F+ + Sbjct: 101 FLKDDQLRCLSKKGNNSRIKWRSPTVKKSLKLRFACGSPWYETLLDKGFPLPSLRTLRRKTECISFESAL 170
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|462238|sp|P35069.2|H2B3_TIGCA (RecName: Full=Histone H2B.3) HSP 1 Score: 215.312 bits (547), Expect = 6.535e-69 Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNI+KGDKKK+RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNISKGDKKKNRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|462237|sp|P35068.2|H2B1_TIGCA (RecName: Full=Histone H2B.1/H2B.2) HSP 1 Score: 214.542 bits (545), Expect = 1.088e-68 Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNI KGDKKK+RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNITKGDKKKNRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|150417952|sp|P83863.2|H2B_LITVA (RecName: Full=Histone H2B) HSP 1 Score: 199.519 bits (506), Expect = 5.929e-63 Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 Query: 261 QKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 QK+I KGDKKK RKESY+IYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 13 QKSITKGDKKK---RKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 115
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|110279003|sp|P0C1H5.2|H2B7_CHICK (RecName: Full=Histone H2B 7; AltName: Full=H2B VII) HSP 1 Score: 197.978 bits (502), Expect = 3.686e-62 Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0 Query: 253 KPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 K G K KGDKK+ R RKESY+IY+YKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 12 KKGSKKAVTKTQKKGDKKRKRARKESYSIYVYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|82230729|sp|Q5BJA5.3|H2B1_DANRE (RecName: Full=Histone H2B 1/2) HSP 1 Score: 196.438 bits (498), Expect = 1.472e-61 Identity = 97/114 (85.09%), Postives = 99/114 (86.84%), Query Frame = 0 Query: 253 KPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 K G K KG KK+ R RKESYAIY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 10 KKGSKKAVTKTAGKGGKKRKRTRKESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 123
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|82237670|sp|Q6PC60.3|H2B3_DANRE (RecName: Full=Histone H2B 3) HSP 1 Score: 195.667 bits (496), Expect = 2.756e-61 Identity = 97/114 (85.09%), Postives = 100/114 (87.72%), Query Frame = 0 Query: 253 KPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 K G K KGDKK+ + RKESYAIY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 12 KKGSKKAVTKTQKKGDKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|59799554|sp|P69069.2|H2B_ONCMY (RecName: Full=Histone H2B >gi|59799555|sp|P69070.2|H2B_SALTR RecName: Full=Histone H2B) HSP 1 Score: 195.282 bits (495), Expect = 4.485e-61 Identity = 96/114 (84.21%), Postives = 99/114 (86.84%), Query Frame = 0 Query: 253 KPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 K G K KG KK+ R RKESYAIY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA E+SRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 10 KKGSKKAVTKTAGKGGKKRKRSRKESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 123
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|82117080|sp|Q9PSW9.3|H2B8_CHICK (RecName: Full=Histone H2B 8; AltName: Full=H2B VIII) HSP 1 Score: 194.512 bits (493), Expect = 9.354e-61 Identity = 96/114 (84.21%), Postives = 100/114 (87.72%), Query Frame = 0 Query: 253 KPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 K G K KGDKK+ + RKESY+IY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 12 KKGSKKAVTKTQKKGDKKRRKTRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|110279002|sp|P0C1H4.2|H2B5_CHICK (RecName: Full=Histone H2B 5; AltName: Full=H2B V) HSP 1 Score: 194.512 bits (493), Expect = 9.455e-61 Identity = 96/114 (84.21%), Postives = 100/114 (87.72%), Query Frame = 0 Query: 253 KPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 K G K KGDKK+ + RKESY+IY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 12 KKGSKKAVTKTQKKGDKKRRKSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of h2b3_tigca ame: full vs. SwissProt
Match: gi|122053|sp|P17271.2|H2B_DROHY (RecName: Full=Histone H2B >gi|51701473|sp|Q76FD7.3|H2B_DROSE RecName: Full=Histone H2B) HSP 1 Score: 194.126 bits (492), Expect = 1.226e-60 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0 Query: 261 QKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 QKNI K DKKK RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 17 QKNITKNDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|462238|sp|P35069.2|H2B3_TIGCA (RecName: Full=Histone H2B.3 >gi|161902|gb|AAC41557.1| histone H2B-3 [Tigriopus californicus]) HSP 1 Score: 215.312 bits (547), Expect = 2.026e-66 Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNI+KGDKKK+RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNISKGDKKKNRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|1233187076|ref|XP_022195035.1| (histone H2B [Nilaparvata lugens] >gi|1233187080|ref|XP_022195036.1| histone H2B [Nilaparvata lugens] >gi|1233187084|ref|XP_022195037.1| histone H2B [Nilaparvata lugens] >gi|1233187087|ref|XP_022195038.1| histone H2B [Nilaparvata lugens] >gi|1233187091|ref|XP_022195040.1| histone H2B [Nilaparvata lugens] >gi|1233187108|ref|XP_022195045.1| histone H2B [Nilaparvata lugens] >gi|1233202176|ref|XP_022207293.1| histone H2B [Nilaparvata lugens] >gi|1233205395|ref|XP_022201822.1| histone H2B [Nilaparvata lugens] >gi|1233211553|ref|XP_022205130.1| histone H2B [Nilaparvata lugens] >gi|1233212693|ref|XP_022205743.1| histone H2B [Nilaparvata lugens] >gi|1233212695|ref|XP_022205744.1| histone H2B [Nilaparvata lugens] >gi|1233213016|ref|XP_022205919.1| histone H2B [Nilaparvata lugens] >gi|1233213455|ref|XP_022206158.1| histone H2B [Nilaparvata lugens] >gi|1233214145|ref|XP_022206528.1| histone H2B [Nilaparvata lugens] >gi|1035439603|gb|ANJ04652.1| histone H2B [Nilaparvata lugens]) HSP 1 Score: 214.927 bits (546), Expect = 2.600e-66 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNIAKGDKKK RKRKESYA+YIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNIAKGDKKKKRKRKESYAVYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|970886253|ref|XP_015127864.1| (PREDICTED: histone H2B-like [Diachasma alloeum]) HSP 1 Score: 214.927 bits (546), Expect = 2.897e-66 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNIAKGDKKK RKRKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNIAKGDKKKKRKRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|462237|sp|P35068.2|H2B1_TIGCA (RecName: Full=Histone H2B.1/H2B.2 >gi|161897|gb|AAC41554.1| histone H2B-1 [Tigriopus californicus] >gi|161900|gb|AAC41556.1| histone H2B-2 [Tigriopus californicus] >gi|260527|gb|AAA12277.1| histone H2B-1 [Tigriopus californicus]) HSP 1 Score: 214.542 bits (545), Expect = 3.373e-66 Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNI KGDKKK+RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNITKGDKKKNRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|970886089|ref|XP_015127773.1| (PREDICTED: histone H2B.3 [Diachasma alloeum]) HSP 1 Score: 214.542 bits (545), Expect = 3.522e-66 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNIAKGDKKK RKRKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNIAKGDKKKKRKRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|817085037|ref|XP_012265189.1| (histone H2B.3 [Athalia rosae] >gi|817085039|ref|XP_012265190.1| histone H2B.3 [Athalia rosae] >gi|998508807|ref|XP_015514798.1| PREDICTED: histone H2B.3 [Neodiprion lecontei]) HSP 1 Score: 213.772 bits (543), Expect = 6.607e-66 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNI+KGDKKK RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNISKGDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|573966005|ref|XP_006665103.1| (PREDICTED: histone H2B [Oryza brachyantha] >gi|1009557113|ref|XP_015913733.1| histone H2B [Parasteatoda tepidariorum] >gi|1117312224|ref|XP_019435463.1| PREDICTED: histone H2B [Lupinus angustifolius] >gi|14269422|gb|AAK58064.1|AF378198_4 histone H2B [Rhynchosciara americana] >gi|674228935|gb|KFK22720.1| hypothetical protein AALP_AAs74787U000100 [Arabis alpina] >gi|1227110482|gb|ASQ41242.1| histone H2B [Anacridium incisum] >gi|1227110484|gb|ASQ41243.1| histone H2B [Schistocerca pallens] >gi|1227110486|gb|ASQ41244.1| histone H2B [Schistocerca literosa] >gi|1227110488|gb|ASQ41245.1| histone H2B [Schistocerca melanocera] >gi|1227110490|gb|ASQ41246.1| histone H2B [Halmenus robustus] >gi|1227110492|gb|ASQ41247.1| histone H2B [Schistocerca obscura] >gi|1227110494|gb|ASQ41248.1| histone H2B [Schistocerca shoshone] >gi|1227110496|gb|ASQ41249.1| histone H2B [Schistocerca nitens] >gi|1227110498|gb|ASQ41250.1| histone H2B [Schistocerca centralis] >gi|1227110500|gb|ASQ41251.1| histone H2B [Schistocerca lineata] >gi|1227110502|gb|ASQ41252.1| histone H2B [Schistocerca serialis cubense] >gi|1227110504|gb|ASQ41253.1| histone H2B [Schistocerca pallens] >gi|1227110506|gb|ASQ41254.1| histone H2B [Schistocerca gregaria] >gi|1227110508|gb|ASQ41255.1| histone H2B [Schistocerca nitens] >gi|1227110510|gb|ASQ41256.1| histone H2B [Schistocerca nitens] >gi|1227110512|gb|ASQ41257.1| histone H2B [Austracris guttulosa] >gi|1227110514|gb|ASQ41258.1| histone H2B [Cyrtacanthacris aeruginosa] >gi|1227110516|gb|ASQ41259.1| histone H2B [Nomadacris septemfasciata] >gi|1227110518|gb|ASQ41260.1| histone H2B [Schistocerca albolineata] >gi|1227110520|gb|ASQ41261.1| histone H2B [Schistocerca alutacea] >gi|1227110522|gb|ASQ41262.1| histone H2B [Schistocerca rubiginosa] >gi|1227110524|gb|ASQ41263.1| histone H2B [Schistocerca ceratiola] >gi|1227110526|gb|ASQ41264.1| histone H2B [Schistocerca lineata] >gi|1227110528|gb|ASQ41265.1| histone H2B [Schistocerca lineata] >gi|1227110530|gb|ASQ41266.1| histone H2B [Schistocerca quisqueya] >gi|1227110532|gb|ASQ41267.1| histone H2B [Schistocerca flavofasciata] >gi|1227110534|gb|ASQ41268.1| histone H2B [Schistocerca pallens] >gi|1227110536|gb|ASQ41269.1| histone H2B [Schistocerca piceifrons] >gi|1227110538|gb|ASQ41270.1| histone H2B [Schistocerca nitens caribbeana] >gi|1227110540|gb|ASQ41271.1| histone H2B [Schistocerca cohni] >gi|1227110542|gb|ASQ41272.1| histone H2B [Schistocerca americana] >gi|1227110544|gb|ASQ41273.1| histone H2B [Schistocerca damnifica] >gi|1227110546|gb|ASQ41274.1| histone H2B [Schistocerca socorro] >gi|1227110548|gb|ASQ41275.1| histone H2B [Valanga sp. HS-2017] >gi|1227110550|gb|ASQ41276.1| histone H2B [Schistocerca cancellata] >gi|1227110552|gb|ASQ41277.1| histone H2B [Schistocerca nitens] >gi|1227110554|gb|ASQ41278.1| histone H2B, partial [Acanthacris ruficornis]) HSP 1 Score: 213.772 bits (543), Expect = 6.751e-66 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNI+KGDKKK RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNISKGDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|1000723569|ref|XP_015610268.1| (PREDICTED: histone H2B [Cephus cinctus]) HSP 1 Score: 208.764 bits (530), Expect = 7.299e-64 Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0 Query: 261 QKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 QKNI KGD KK RKRKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 17 QKNITKGDNKKKRKRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|1218210757|ref|XP_021712202.1| (LOW QUALITY PROTEIN: histone H2B-like [Aedes aegypti]) HSP 1 Score: 208.379 bits (529), Expect = 9.780e-64 Identity = 100/108 (92.59%), Postives = 106/108 (98.15%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNI KGDK+K ++RKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 15 KAQKNIVKGDKEKKQRRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of h2b3_tigca ame: full vs. nr
Match: gi|662215414|ref|XP_008481588.1| (PREDICTED: histone H2B-like [Diaphorina citri] >gi|662217514|ref|XP_008482740.1| PREDICTED: histone H2B-like [Diaphorina citri] >gi|662217915|ref|XP_008482961.1| PREDICTED: histone H2B-like [Diaphorina citri] >gi|662217925|ref|XP_008482966.1| PREDICTED: histone H2B-like [Diaphorina citri] >gi|662221069|ref|XP_008484707.1| PREDICTED: histone H2B-like [Diaphorina citri]) HSP 1 Score: 207.994 bits (528), Expect = 1.339e-63 Identity = 100/108 (92.59%), Postives = 105/108 (97.22%), Query Frame = 0 Query: 259 EAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 366 +AQKNIAK DKKK +RKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVNDIFERIA+E+SRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 16 KAQKNIAKSDKKKKHRRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 123 The following BLAST results are available for this feature:
BLAST of h2b3_tigca ame: full vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 8
BLAST of h2b3_tigca ame: full vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of h2b3_tigca ame: full vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2014_size22653:1666..6857- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2014_size22653-processed-gene-0.4 ID=snap_masked-scaffold2014_size22653-processed-gene-0.4|Name=h2b3_tigca ame: full|organism=Tigriopus kingsejongensis|type=gene|length=5192bp|location=Sequence derived from alignment at scaffold2014_size22653:1666..6857- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'h2b3_tigca ame: full' has the following synonyms
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