39s ribosomal protein mitochondrial precursor, snap_masked-scaffold521_size146803-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial precursor
Unique Namesnap_masked-scaffold521_size146803-processed-gene-0.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000010249 (supercontig:LSalAtl2s:LSalAtl2s67:717344:718924:-1 gene:EMLSAG00000010249 transcript:EMLSAT00000010249 description:"maker-LSalAtl2s67-augustus-gene-7.20")

HSP 1 Score: 165.622 bits (418), Expect = 6.322e-50
Identity = 82/169 (48.52%), Postives = 114/169 (67.46%), Query Frame = 0 
Query:   31 ERESEKVANKVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIFLGGTPRSKKWNIRWE 199
            +R SE    K+   R+ L NKRH P  K  +F  FE +   ++H    +YG R TG+RH   WE++PE  P+L+VPDLTD +LKPYVSYR K + QEE T KDLFNAVYG KI++DFK+ +LN+ G  L+PS  EKMT  +A V A++TGSDI+ GG  +  ++ ++++
Sbjct:  240 QRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGK-PELNHPT-TNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYK 406
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|121988765|sp|Q291A0.1|RM41_DROPS (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 137.887 bits (346), Expect = 2.560e-40
Identity = 61/104 (58.65%), Postives = 78/104 (75.00%), Query Frame = 0 
Query:   81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            G R TG+     +  +PEK+P +IVPDLTDC+LKPYVSY+  E+ Q EFT+ DLFNAVY KKI+ DFKAG L   G P +PS EEK+T+ +A ++AR+TGSDIF
Sbjct:   63 GVRDTGILVDGKFVEIPEKIPDIIVPDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAEEKLTSSEAFLRARRTGSDIF 166
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|122063590|sp|Q7JZM8.1|RM41_DROME (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 125.561 bits (314), Expect = 1.438e-35
Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 0 
Query:   81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            G R TG+     +  +PEK+P +IVPDLT C+LKPYVSY+  ++ Q EFT+ DLFNAVY +KI+ DFKAG+L   G   +PS  E++T E+A  +AR+TGSDIF
Sbjct:   63 GVRDTGILVDGQYVEIPEKIPDIIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQKDGSAKEPSVNEQLTPEEALQRARKTGSDIF 166
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81882547|sp|Q5BJX1.1|RM41_RAT (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 60.4622 bits (145), Expect = 8.932e-11
Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 0 
Query:   79 SYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQL---NDQGEPLQPSQEEKM 167
            S GA+ TG   +  +  + E VP+ +VPDLT  +LKPYV+YR         TAK LF       I  DFK G     N +    +P+QE K+
Sbjct:   33 SRGAKKTGFYTNRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTPLTAKALFLETVAPAIEKDFKEGTFDANNLEKYGFEPTQEGKL 124
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81880390|sp|Q9CQN7.1|RM41_MOUSE (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor)

HSP 1 Score: 58.151 bits (139), Expect = 6.913e-10
Identity = 35/93 (37.63%), Postives = 47/93 (50.54%), Query Frame = 0 
Query:   79 SYGARGTGV-RHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQL---NDQGEPLQPSQEEKM 167
            S GA+ TG+      +  + E VP+ +VPDLT  +LKPYV+YR         TAK LF       I  DFK G     N +    +P+QE K+
Sbjct:   33 SRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTPLTAKALFQETVAPAIEKDFKEGTFDANNLEKYGFEPTQEGKL 125
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74750734|sp|Q8IXM3.1|RM41_HUMAN (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; AltName: Full=39S ribosomal protein L27 homolog; AltName: Full=Bcl-2-interacting mitochondrial ribosomal protein L41; AltName: Full=Cell proliferation-inducing gene 3 protein; AltName: Full=MRP-L27 homolog; AltName: Full=Mitochondrial large ribosomal subunit protein mL41; Flags: Precursor)

HSP 1 Score: 57.3806 bits (137), Expect = 1.022e-9
Identity = 37/96 (38.54%), Postives = 48/96 (50.00%), Query Frame = 0 
Query:   77 RYSYGARGTGVRHHANWEHV--PEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQL---NDQGEPLQPSQEEKM 167
            R   GA+G G    + W  V   E VP+ +VPDLT  +LKPYVSY   E  +   TA  LF+      I  DFK G     N +    +P+QE K+
Sbjct:   33 RKGRGAKGIGF-LTSGWRFVQIKEMVPEFVVPDLTGFKLKPYVSYLAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPDNLEKYGFEPTQEGKL 127
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|82183610|sp|Q6DJI4.1|RM41A_XENLA (RecName: Full=39S ribosomal protein L41-A, mitochondrial; Short=L41mt-A; Short=MRP-L41-A; Flags: Precursor)

HSP 1 Score: 51.2174 bits (121), Expect = 2.235e-7
Identity = 34/93 (36.56%), Postives = 47/93 (50.54%), Query Frame = 0 
Query:   81 GARGTG-VRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAG-----QLNDQGEPLQPSQEEKM 167
            GA+  G +     +  V E VP  +VPDLT  +LKPYVSY+     ++  TAK LF    G +I  D + G      L   G   +P+QE K+
Sbjct:   35 GAKKIGYLTASGKFVKVREMVPVFVVPDLTGFKLKPYVSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQEGTFRPEDLEKYG--FEPTQEGKL 125
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|82184781|sp|Q6INF3.1|RM41B_XENLA (RecName: Full=39S ribosomal protein L41-B, mitochondrial; Short=L41mt-B; Short=MRP-L41-B; Flags: Precursor)

HSP 1 Score: 50.8322 bits (120), Expect = 3.318e-7
Identity = 34/93 (36.56%), Postives = 47/93 (50.54%), Query Frame = 0 
Query:   81 GARGTG-VRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSD-----FKAGQLNDQGEPLQPSQEEKM 167
            GA+  G +     +  V E VP  +VPDLT  +LKPYVSY+     ++  TAK LF    G +I  D     F+   L   G   +P+QE K+
Sbjct:   35 GAKKIGYLTSSGKFVKVREMVPVFVVPDLTGFKLKPYVSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQESTFRPEDLEKYG--FEPTQEGKL 125
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1133420595|ref|XP_019865882.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Aethina tumida])

HSP 1 Score: 137.502 bits (345), Expect = 7.901e-38
Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 0 
Query:   81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            G R TG      + HVPEKVP+LIVPDLT  +L+PYVSYRT ++ Q EFTA+DLFN VY  KI+ DF  G+L+  G PL PS EEK+TAE+A+++ARQTGSDIF
Sbjct:   56 GVRDTGYYLDGKFIHVPEKVPELIVPDLTGFKLQPYVSYRTPDVVQTEFTAEDLFNVVYAPKIVKDFNEGKLDADGNPLNPSAEEKLTAEEAKIKARQTGSDIF 159
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|125808115|ref|XP_001360637.1| (uncharacterized protein Dpse_GA11937 [Drosophila pseudoobscura pseudoobscura] >gi|121988765|sp|Q291A0.1|RM41_DROPS RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor >gi|54635809|gb|EAL25212.1| uncharacterized protein Dpse_GA11937 [Drosophila pseudoobscura pseudoobscura])

HSP 1 Score: 137.887 bits (346), Expect = 7.936e-38
Identity = 61/104 (58.65%), Postives = 78/104 (75.00%), Query Frame = 0 
Query:   81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            G R TG+     +  +PEK+P +IVPDLTDC+LKPYVSY+  E+ Q EFT+ DLFNAVY KKI+ DFKAG L   G P +PS EEK+T+ +A ++AR+TGSDIF
Sbjct:   63 GVRDTGILVDGKFVEIPEKIPDIIVPDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAEEKLTSSEAFLRARRTGSDIF 166
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1130215872|ref|XP_019755976.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Dendroctonus ponderosae] >gi|478259781|gb|ENN79614.1| hypothetical protein YQE_03941, partial [Dendroctonus ponderosae] >gi|546677171|gb|ERL88061.1| hypothetical protein D910_05450 [Dendroctonus ponderosae])

HSP 1 Score: 137.502 bits (345), Expect = 9.502e-38
Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 0 
Query:   40 KVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRH-HANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            K +FK+  LFNKR         F   ++  K  D    ++ G R  G       +  +PEK+P+LIVPDLTDC+LKPYVSYR  ++ Q EFTA+DLFN VY  KI+ D K G+L + G PL+PS EE +T E+A+++A+QTGSDIF
Sbjct:   20 KRNFKKFPLFNKRGSRQ-----FKEAQSNIKTRDPNLFHTRGVREVGYYELDGKFVLIPEKIPELIVPDLTDCQLKPYVSYRAADVVQSEFTAQDLFNVVYAPKIIKDLKEGKLANDGSPLKPSPEETLTPEEAKIKAKQTGSDIF 160
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1130197204|ref|XP_019755103.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Dendroctonus ponderosae] >gi|478269209|gb|ENN83301.1| hypothetical protein YQE_00340, partial [Dendroctonus ponderosae])

HSP 1 Score: 137.117 bits (344), Expect = 1.207e-37
Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 0 
Query:   40 KVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRH-HANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            K +FK+  LFNKR         F   ++  K+ D    ++ G R  G       +  +PEK+P+LIVPDLTDC+LKPYVSYR  ++ Q EFTA+DLFN VY  KI+ D K G+L D G PL+PS EE +T E+A+++ +QTGSDIF
Sbjct:   20 KRNFKKFPLFNKRGSRQ-----FKEAQSNIKSRDPNLFHTRGVREVGYYEPDGKFVLIPEKIPELIVPDLTDCQLKPYVSYRAADVVQSEFTAQDLFNVVYAPKIVKDLKEGKLADVGSPLKPSPEETLTPEEAKIKVKQTGSDIF 160
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1284992942|ref|XP_023029563.1| (39S ribosomal protein L41, mitochondrial [Leptinotarsa decemlineata])

HSP 1 Score: 136.732 bits (343), Expect = 1.471e-37
Identity = 69/145 (47.59%), Postives = 98/145 (67.59%), Query Frame = 0 
Query:   40 KVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            K +FK+  ++NKR        IF   +A     D    ++ G R  G +    +  +PEK+PQL+VPDLT  +LKPYVSYR  E+ Q +FTA+DLFN VY  KI+ DFK G+L+  G+PL+PS++EKMTAE+A+++A+QTG+DIF
Sbjct:   21 KRNFKKFPIYNKRGS-----RIFKKQQAENPDPD-VPIHTRGVREIGYKVDGKFVEIPEKIPQLVVPDLTGFKLKPYVSYRAPEVTQSKFTAEDLFNVVYAPKIVKDFKEGKLDSNGQPLEPSEDEKMTAEEAKIKAKQTGTDIF 159
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|195150553|ref|XP_002016215.1| (GL11472 [Drosophila persimilis] >gi|1037013704|ref|XP_017150274.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Drosophila miranda] >gi|194110062|gb|EDW32105.1| GL11472 [Drosophila persimilis])

HSP 1 Score: 136.346 bits (342), Expect = 3.217e-37
Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 0 
Query:   81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            G R TG+     +  +PEK+P +IVPDLTDC+LKPYVSY+  E+ Q EFT+ DLFNAVY KKI+ DFKAG L   G P +PS EE++T+ +A ++AR+TGSDIF
Sbjct:   63 GVRDTGILVDGKFVEIPEKIPDIIVPDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAEEQLTSSEAFLRARRTGSDIF 166
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1080038035|ref|XP_018579481.1| (39S ribosomal protein L41, mitochondrial [Anoplophora glabripennis])

HSP 1 Score: 135.576 bits (340), Expect = 5.041e-37
Identity = 60/104 (57.69%), Postives = 80/104 (76.92%), Query Frame = 0 
Query:   81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            G R    +       +PEK+P+L+VPDLTD +LKPYVSYR  ++ Q +FTA+DLFN VY  KIL DF+ G+L+D G+PL+PS +EKMTAE+A+++ARQTGSDIF
Sbjct:   58 GVRDVAYKDGDKLILIPEKIPELVVPDLTDFKLKPYVSYRAPDVVQSQFTAEDLFNVVYAPKILKDFENGKLDDNGQPLEPSADEKMTAEEAKLKARQTGSDIF 161
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1233200256|ref|XP_022199387.1| (39S ribosomal protein L41, mitochondrial-like isoform X1 [Nilaparvata lugens] >gi|1233200258|ref|XP_022199388.1| 39S ribosomal protein L41, mitochondrial-like isoform X2 [Nilaparvata lugens])

HSP 1 Score: 135.961 bits (341), Expect = 5.147e-37
Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = 0 
Query:   40 KVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            K +F++ +L N+    H++R        +   +     Y YG +  G      +  VPE +P +IVPDLTDCELKPYVSYR   I Q E+T +DLFNAVY  KI +DF  G+LN  G P++PS EE++TAE+AR++ARQTG DI+
Sbjct:   21 KRNFRKFLLHNRGPQSHKER-------QKTNPLPDMLPYHYGVKKPGYMEGDKFIEVPEMIPDIIVPDLTDCELKPYVSYRVSAIEQPEWTPRDLFNAVYRSKIENDFNTGKLNADGSPVEPSAEERLTAEEARIKARQTGCDIY 158
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|157129933|ref|XP_001661823.1| (39S ribosomal protein L41, mitochondrial [Aedes aegypti] >gi|108872014|gb|EAT36239.1| AAEL011666-PA [Aedes aegypti])

HSP 1 Score: 135.191 bits (339), Expect = 7.598e-37
Identity = 69/161 (42.86%), Postives = 100/161 (62.11%), Query Frame = 0 
Query:   34 SEKVANKVHFKRIVLFNKR----------HHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            S  VA K +F++ +L+NKR           +P Q  D+  P + R            G R TGV     +  + EK+P+LIVP+L  C+ KPYVSYR  E+ Q EFT++DLFNAVY +K++ DFK+G LN+ G P +PS+ EK+T E+A ++AR++GSD+F
Sbjct:   12 SAAVAGKHNFRKFLLYNKRGTRIFKQLRAANPEQYPDM--PIDKR------------GVRDTGVTRDGKYHEIAEKIPELIVPNLDGCKFKPYVSYRAPEVIQSEFTSQDLFNAVYAQKVIDDFKSGNLNEDGTPKEPSEVEKLTPEEAWIRARKSGSDMF 158
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1037108478|ref|XP_017107926.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Drosophila bipectinata])

HSP 1 Score: 135.191 bits (339), Expect = 8.090e-37
Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 0 
Query:   40 KVHFKRIVLFNKRHHPHQKRDIFPPFEARRK-AMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184
            K +F++ V++NKR     K       EA+R  A      +  G R TG++   N+  +PEK+P+LIVPDLT C+LKPYVSY+  ++ Q EFT+ DLFNA+Y KKI+ DFKAG L   G   +PS  E++TAE+A  +AR+TG+DIF
Sbjct:   28 KRNFRKFVVYNKRGTRVVK-------EAQRTMANPPVPIHKRGVRDTGIKVDGNYIEIPEKIPELIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAIYSKKIIEDFKAGTLQADGSSKEPSPNEQLTAEEAYQRARKTGTDIF 166
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000102496.322e-5048.52supercontig:LSalAtl2s:LSalAtl2s67:717344:718924:-1... [more]
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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|121988765|sp|Q291A0.1|RM41_DROPS2.560e-4058.65RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|122063590|sp|Q7JZM8.1|RM41_DROME1.438e-3553.85RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|81882547|sp|Q5BJX1.1|RM41_RAT8.932e-1138.04RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|81880390|sp|Q9CQN7.1|RM41_MOUSE6.913e-1037.63RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|74750734|sp|Q8IXM3.1|RM41_HUMAN1.022e-938.54RecName: Full=39S ribosomal protein L41, mitochond... [more]
gi|82183610|sp|Q6DJI4.1|RM41A_XENLA2.235e-736.56RecName: Full=39S ribosomal protein L41-A, mitocho... [more]
gi|82184781|sp|Q6INF3.1|RM41B_XENLA3.318e-736.56RecName: Full=39S ribosomal protein L41-B, mitocho... [more]
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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1133420595|ref|XP_019865882.1|7.901e-3861.54PREDICTED: 39S ribosomal protein L41, mitochondria... [more]
gi|125808115|ref|XP_001360637.1|7.936e-3858.65uncharacterized protein Dpse_GA11937 [Drosophila p... [more]
gi|1130215872|ref|XP_019755976.1|9.502e-3847.95PREDICTED: 39S ribosomal protein L41, mitochondria... [more]
gi|1130197204|ref|XP_019755103.1|1.207e-3747.95PREDICTED: 39S ribosomal protein L41, mitochondria... [more]
gi|1284992942|ref|XP_023029563.1|1.471e-3747.5939S ribosomal protein L41, mitochondrial [Leptinot... [more]
gi|195150553|ref|XP_002016215.1|3.217e-3757.69GL11472 [Drosophila persimilis] >gi|1037013704|ref... [more]
gi|1080038035|ref|XP_018579481.1|5.041e-3757.6939S ribosomal protein L41, mitochondrial [Anoploph... [more]
gi|1233200256|ref|XP_022199387.1|5.147e-3746.2139S ribosomal protein L41, mitochondrial-like isof... [more]
gi|157129933|ref|XP_001661823.1|7.598e-3742.8639S ribosomal protein L41, mitochondrial [Aedes ae... [more]
gi|1037108478|ref|XP_017107926.1|8.090e-3747.26PREDICTED: 39S ribosomal protein L41, mitochondria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold521_size146803supercontigscaffold521_size146803:54046..54648 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold521_size146803-processed-gene-0.1-mRNA-1snap_masked-scaffold521_size146803-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold521_size146803:54046..54648+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold521_size146803-processed-gene-0.1 ID=snap_masked-scaffold521_size146803-processed-gene-0.1|Name=39s ribosomal protein mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=603bp|location=Sequence derived from alignment at scaffold521_size146803:54046..54648+ (Tigriopus kingsejongensis)
ATGCTCCAACTGAGATCCTTGCTTCTGGCCCGGGGACCAACCCTCGGGCA
GAGCTTCCACACGGCGCCTGGTCTGGCCCAATACTTCAAAGAGCGGGAGA
GCGAAAAGGTGGCCAACAAAGTGCACTTTAAGCGAATCGTACTTTTCAAC
AAGCGACACCATCCCCACCAGAAGCGGGACATCTTCCCCCCGTTTGAGGC
CCGGAGGAAGGCTATGGATCACGCTAAGCGCTACAGCTATGGGGCGCGTG
GGACCGGCGTCCGGCATCATGCCAATTGGGAACATGTGCCGGAGAAGGTC
CCTCAACTGATTGTGCCTGATCTGACCGATTGCGAATTGAAACCCTACGT
GTCGTATCGCACCAAGGAAATTTATCAAGAGGAGTTCACGGCCAAAGATC
TCTTCAACGCCGTCTACGGCAAGAAGATCCTAAGCGACTTCAAGGCGGGA
CAACTGAACGATCAGGGCGAGCCTCTTCAACCGAGTCAGGAAGAAAAGAT
GACGGCTGAAGATGCCCGAGTCCAGGCCAGACAGACAGGATCCGACATCT
TTTTGGGAGGCACGCCCAGGTCGAAAAAGTGGAACATTCGATGGGAGTAC
TAG
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Synonyms
The feature '39s ribosomal protein mitochondrial precursor' has the following synonyms
Synonym
Tk12188
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