39s ribosomal protein mitochondrial precursor, snap_masked-scaffold521_size146803-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000010249 (supercontig:LSalAtl2s:LSalAtl2s67:717344:718924:-1 gene:EMLSAG00000010249 transcript:EMLSAT00000010249 description:"maker-LSalAtl2s67-augustus-gene-7.20") HSP 1 Score: 165.622 bits (418), Expect = 6.322e-50 Identity = 82/169 (48.52%), Postives = 114/169 (67.46%), Query Frame = 0 Query: 31 ERESEKVANKVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIFLGGTPRSKKWNIRWE 199 +R SE K+ R+ L NKRH P K +F FE + ++H +YG R TG+RH WE++PE P+L+VPDLTD +LKPYVSYR K + QEE T KDLFNAVYG KI++DFK+ +LN+ G L+PS EKMT +A V A++TGSDI+ GG + ++ ++++ Sbjct: 240 QRLSEFDYKKIFLGRLKLGNKRHLPVHKSKLFKKFEGK-PELNHPT-TNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYK 406
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|121988765|sp|Q291A0.1|RM41_DROPS (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor) HSP 1 Score: 137.887 bits (346), Expect = 2.560e-40 Identity = 61/104 (58.65%), Postives = 78/104 (75.00%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TG+ + +PEK+P +IVPDLTDC+LKPYVSY+ E+ Q EFT+ DLFNAVY KKI+ DFKAG L G P +PS EEK+T+ +A ++AR+TGSDIF Sbjct: 63 GVRDTGILVDGKFVEIPEKIPDIIVPDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAEEKLTSSEAFLRARRTGSDIF 166
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|122063590|sp|Q7JZM8.1|RM41_DROME (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor) HSP 1 Score: 125.561 bits (314), Expect = 1.438e-35 Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TG+ + +PEK+P +IVPDLT C+LKPYVSY+ ++ Q EFT+ DLFNAVY +KI+ DFKAG+L G +PS E++T E+A +AR+TGSDIF Sbjct: 63 GVRDTGILVDGQYVEIPEKIPDIIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQKDGSAKEPSVNEQLTPEEALQRARKTGSDIF 166
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81882547|sp|Q5BJX1.1|RM41_RAT (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor) HSP 1 Score: 60.4622 bits (145), Expect = 8.932e-11 Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 0 Query: 79 SYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQL---NDQGEPLQPSQEEKM 167 S GA+ TG + + + E VP+ +VPDLT +LKPYV+YR TAK LF I DFK G N + +P+QE K+ Sbjct: 33 SRGAKKTGFYTNRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTPLTAKALFLETVAPAIEKDFKEGTFDANNLEKYGFEPTQEGKL 124
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81880390|sp|Q9CQN7.1|RM41_MOUSE (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; Flags: Precursor) HSP 1 Score: 58.151 bits (139), Expect = 6.913e-10 Identity = 35/93 (37.63%), Postives = 47/93 (50.54%), Query Frame = 0 Query: 79 SYGARGTGV-RHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQL---NDQGEPLQPSQEEKM 167 S GA+ TG+ + + E VP+ +VPDLT +LKPYV+YR TAK LF I DFK G N + +P+QE K+ Sbjct: 33 SRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTPLTAKALFQETVAPAIEKDFKEGTFDANNLEKYGFEPTQEGKL 125
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74750734|sp|Q8IXM3.1|RM41_HUMAN (RecName: Full=39S ribosomal protein L41, mitochondrial; Short=L41mt; Short=MRP-L41; AltName: Full=39S ribosomal protein L27 homolog; AltName: Full=Bcl-2-interacting mitochondrial ribosomal protein L41; AltName: Full=Cell proliferation-inducing gene 3 protein; AltName: Full=MRP-L27 homolog; AltName: Full=Mitochondrial large ribosomal subunit protein mL41; Flags: Precursor) HSP 1 Score: 57.3806 bits (137), Expect = 1.022e-9 Identity = 37/96 (38.54%), Postives = 48/96 (50.00%), Query Frame = 0 Query: 77 RYSYGARGTGVRHHANWEHV--PEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQL---NDQGEPLQPSQEEKM 167 R GA+G G + W V E VP+ +VPDLT +LKPYVSY E + TA LF+ I DFK G N + +P+QE K+ Sbjct: 33 RKGRGAKGIGF-LTSGWRFVQIKEMVPEFVVPDLTGFKLKPYVSYLAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPDNLEKYGFEPTQEGKL 127
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|82183610|sp|Q6DJI4.1|RM41A_XENLA (RecName: Full=39S ribosomal protein L41-A, mitochondrial; Short=L41mt-A; Short=MRP-L41-A; Flags: Precursor) HSP 1 Score: 51.2174 bits (121), Expect = 2.235e-7 Identity = 34/93 (36.56%), Postives = 47/93 (50.54%), Query Frame = 0 Query: 81 GARGTG-VRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAG-----QLNDQGEPLQPSQEEKM 167 GA+ G + + V E VP +VPDLT +LKPYVSY+ ++ TAK LF G +I D + G L G +P+QE K+ Sbjct: 35 GAKKIGYLTASGKFVKVREMVPVFVVPDLTGFKLKPYVSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQEGTFRPEDLEKYG--FEPTQEGKL 125
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|82184781|sp|Q6INF3.1|RM41B_XENLA (RecName: Full=39S ribosomal protein L41-B, mitochondrial; Short=L41mt-B; Short=MRP-L41-B; Flags: Precursor) HSP 1 Score: 50.8322 bits (120), Expect = 3.318e-7 Identity = 34/93 (36.56%), Postives = 47/93 (50.54%), Query Frame = 0 Query: 81 GARGTG-VRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSD-----FKAGQLNDQGEPLQPSQEEKM 167 GA+ G + + V E VP +VPDLT +LKPYVSY+ ++ TAK LF G +I D F+ L G +P+QE K+ Sbjct: 35 GAKKIGYLTSSGKFVKVREMVPVFVVPDLTGFKLKPYVSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQESTFRPEDLEKYG--FEPTQEGKL 125
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225712034|gb|ACO11863.1| (39S ribosomal protein L41, mitochondrial precursor [Lepeophtheirus salmonis]) HSP 1 Score: 167.548 bits (423), Expect = 2.888e-49 Identity = 82/169 (48.52%), Postives = 115/169 (68.05%), Query Frame = 0 Query: 31 ERESEKVANKVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIFLGGTPRSKKWNIRWE 199 +R SE K+ R+ L NKRH P K +F FE + + ++H +YG R TG+RH WE++PE P+L+VPDLTD +LKPYVSYR K + QEE T KDLFNAVYG KI++DFK+ +LN+ G L+PS EKMT +A V A++TGSDI+ GG + ++ ++++ Sbjct: 20 QRSSEFDYKKIFLGRLKLGNKRHLPIHKSKLFKKFEGKPE-LNHPTT-NYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFNAVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIYQGGEAQDPRFKLKYK 186
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1325277875|ref|XP_023323574.1| (39S ribosomal protein L41, mitochondrial-like [Eurytemora affinis]) HSP 1 Score: 157.918 bits (398), Expect = 2.683e-45 Identity = 71/117 (60.68%), Postives = 92/117 (78.63%), Query Frame = 0 Query: 80 YGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIFLGGTPRSKKWNI 196 YGAR TG+ H + E VPE +P+LIVPDL DC+LKPYVSY TK+IYQEE T+KDLFN +YG+KI+ DFK G+L+ +G PL+PS EK+T+E A ++ARQTGSDIF GG +K + + Sbjct: 70 YGARPTGIDHFSGGETVPEMIPELIVPDLEDCKLKPYVSYATKDIYQEELTSKDLFNVIYGQKIIQDFKTGKLDSEGRPLEPSPVEKLTSEQAYIRARQTGSDIFQGGEVPNKTYKL 186
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|751788948|ref|XP_011203957.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Bactrocera dorsalis]) HSP 1 Score: 145.206 bits (365), Expect = 9.608e-41 Identity = 62/104 (59.62%), Postives = 83/104 (79.81%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TGV + +PE++P+LIVPDLTDC+LKPYVSY+ E+ Q EFT+ DLFNAVY KKI+ DFK G+LND G P+ PS++E++TA++A ++AR+TGSDIF Sbjct: 65 GVRDTGVMVDGRFVEIPERIPELIVPDLTDCKLKPYVSYKAPEVIQSEFTSLDLFNAVYSKKIIEDFKEGKLNDDGSPVTPSKDEQLTADEALIRARKTGSDIF 168
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|751451579|ref|XP_011180123.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Zeugodacus cucurbitae]) HSP 1 Score: 145.206 bits (365), Expect = 1.156e-40 Identity = 63/104 (60.58%), Postives = 81/104 (77.88%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TGV + +PE++P+LIVPDLTDC+LKPYVSY+ E+ Q EFT+ DLFNAVY +KI+ DFK G+LND G P PSQ E++TAE+A ++AR+TGSDIF Sbjct: 65 GVRDTGVTIDGRYVEIPERIPELIVPDLTDCKLKPYVSYKAPEVIQSEFTSLDLFNAVYSQKIIEDFKEGKLNDDGSPANPSQNEQLTAEEALIRARKTGSDIF 168
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1098660834|ref|XP_018793584.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Bactrocera latifrons]) HSP 1 Score: 145.206 bits (365), Expect = 1.234e-40 Identity = 62/104 (59.62%), Postives = 83/104 (79.81%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TGV + +PE++P+LIVPDLTDC+LKPYVSY+ E+ Q EFT+ DLFNAVY KKI+ DFK G+LND G P+ PS++E++TA++A ++AR+TGSDIF Sbjct: 65 GVRDTGVMVDGRFVEIPERIPELIVPDLTDCKLKPYVSYKAPEVIQSEFTSLDLFNAVYSKKIIEDFKEGKLNDDGSPVTPSKDEQLTADEALIRARKTGSDIF 168
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|926640111|ref|XP_013786140.1| (39S ribosomal protein L41, mitochondrial-like [Limulus polyphemus]) HSP 1 Score: 145.206 bits (365), Expect = 1.355e-40 Identity = 69/145 (47.59%), Postives = 99/145 (68.28%), Query Frame = 0 Query: 40 KVHFKRIVLFNKRHHPHQKRDIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 K +F++ + NKR K + + +DH G R TG +H ++ PE +P+LIVPDLT+CELKPY+SY+ ++ Q EFTA+DLFN +Y KKI+ D++AG+L++ G PL PS+EEKMTAE+A+++AR TGSDIF Sbjct: 35 KRNFRKFTMPNKRGTKEYKAKL-----SELDLVDHR-----GVRMTGSKHEMAFKQYPEMIPELIVPDLTNCELKPYISYQAPDVTQGEFTARDLFNVIYSKKIIDDYEAGKLDNAGNPLAPSEEEKMTAEEAKIKARMTGSDIF 169
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|929352350|ref|XP_014085175.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Bactrocera oleae]) HSP 1 Score: 143.665 bits (361), Expect = 3.656e-40 Identity = 60/104 (57.69%), Postives = 84/104 (80.77%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TGV + +PE++P+LIVPDLTDC+LKPYVSY++ E+ Q EFT+ DLFNAVY KK++ DFK G+LND G P+ PS++E++TA++A ++AR+TG+DIF Sbjct: 65 GVRDTGVTIDGRFVEIPERIPELIVPDLTDCKLKPYVSYKSPEVIQSEFTSLDLFNAVYSKKLIEDFKEGKLNDDGSPVNPSKDEQLTADEALIRARKTGTDIF 168
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1069795020|ref|XP_018322387.1| (PREDICTED: 39S ribosomal protein L41, mitochondrial [Agrilus planipennis]) HSP 1 Score: 140.198 bits (352), Expect = 6.377e-39 Identity = 64/104 (61.54%), Postives = 81/104 (77.88%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TG + + + VPE +P+LIVPDLTD +LKPYVSYR +I Q EFTA+DLFN VY KKI+ DFK G+LN+ G P +PS EEK+T+E+A ++ARQTGSDIF Sbjct: 56 GVRDTGYKLNGKFIKVPEMIPELIVPDLTDFKLKPYVSYRAPDIIQSEFTAEDLFNVVYAKKIIGDFKGGKLNEDGTPKEPSPEEKLTSEEATLKARQTGSDIF 159
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|498949838|ref|XP_004522918.1| (39S ribosomal protein L41, mitochondrial [Ceratitis capitata]) HSP 1 Score: 140.584 bits (353), Expect = 6.428e-39 Identity = 58/104 (55.77%), Postives = 81/104 (77.88%), Query Frame = 0 Query: 81 GARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 G R TG+ + +PE++P+LIVPDLTDC+LKPYVSY++ ++ Q EFT+ DLFNA+Y KKI+ DFK G+LN G P+ PS +E +TA++A ++AR+TGSDIF Sbjct: 65 GVRDTGINIDGKYVEIPERIPELIVPDLTDCKLKPYVSYKSPDVVQSEFTSLDLFNAIYSKKIIEDFKEGKLNKDGSPVNPSNDELLTADEALIRARKTGSDIF 168
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1108467381|emb|CRL04691.1| (CLUMA_CG017755, isoform A [Clunio marinus]) HSP 1 Score: 139.043 bits (349), Expect = 2.212e-38 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 0 Query: 37 VANKVHFKRIVLFNKRHHPHQKR-------DIFPPFEARRKAMDHAKRYSYGARGTGVRHHANWEHVPEKVPQLIVPDLTDCELKPYVSYRTKEIYQEEFTAKDLFNAVYGKKILSDFKAGQLNDQGEPLQPSQEEKMTAEDARVQARQTGSDIF 184 ++ K +F++ +L+NKR K+ DI P + R G R TG+R + ++ +PE +P+LIVPDLTDC+ KPYVSY+T ++ Q EFT++DLFNA+Y KIL+DFK LN+ G +PS+EE++TA++A ++AR+TGSDIF Sbjct: 21 LSGKKNFRKFLLYNKRGTRIFKKYRHISNPDI--PIDLR------------GLRETGIRINGEYKEIPEMIPELIVPDLTDCKFKPYVSYKTLDVVQSEFTSQDLFNAIYAGKILNDFKNDNLNEDGTSKEPSEEEQLTADEAYLRARKTGSDIF 161 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 7
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold521_size146803:54046..54648+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold521_size146803-processed-gene-0.1 ID=snap_masked-scaffold521_size146803-processed-gene-0.1|Name=39s ribosomal protein mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=603bp|location=Sequence derived from alignment at scaffold521_size146803:54046..54648+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial precursor' has the following synonyms
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