heparan sulfate 2-o-sulfotransferase pipe, snap_masked-scaffold89_size390429-processed-gene-2.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 70.8626 bits (172), Expect = 1.095e-12 Identity = 36/86 (41.86%), Postives = 46/86 (53.49%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFR 109 CAVCG + H YG TC C+ FF+R +++ N K+VC C V+ R C+ CRF KCL GM + V DS K R R Sbjct: 409 CAVCGDNAACQH--YGVRTCEGCKGFFKRTVQK--NAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR 490
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 70.0922 bits (170), Expect = 1.392e-12 Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKG-----GTCEVNPTTRKSCRKCRFNKCLEAGMKTDFV 98 C +CG + H +YGA CFSCRAFF R + + +F C +G G C + TR C+ CR+ CL AGM +V Sbjct: 137 CRICGDIAPP-HNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYV 215
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 69.3218 bits (168), Expect = 2.929e-12 Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0 Query: 18 DTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIR 107 D + + C VCG +H YG TC SC+ FF+R ++ + + C +C ++ T RK C CRF KCL+ GMK + V D + R Sbjct: 180 DGMEELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNKK--VYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGR 265
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000007455 (supercontig:LSalAtl2s:LSalAtl2s427:101390:102208:1 gene:EMLSAG00000007455 transcript:EMLSAT00000007455 description:"maker-LSalAtl2s427-augustus-gene-1.12") HSP 1 Score: 64.6994 bits (156), Expect = 3.942e-12 Identity = 44/162 (27.16%), Postives = 78/162 (48.15%), Query Frame = 0 Query: 837 PDGVRKTAFLAHIRYFSHPNFHPIWISLVRDPVERFISRFYYIRRQ----AERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQLKSEE 994 P+G K ++H N P +IS++RDP++R+IS +YYIR +F+ R++ +D+ +Q + S I+YFCG+ C + L+ AKE++ R +S++GI E+ L L+ P+FF ++ ++ E Sbjct: 4 PNGRYKHMHFIDFTNYNHQN--PKYISIIRDPIQRYISWYYYIRNPIYIVQNQFRVTVRQL--------------------KDQHHLQPN--FPGSQISYFCGYIPDCFAGSLARRLSIAKENVDRYYSVIGITEDMNTTLEVLKGFIPRFFGALSSNRTVE 141
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 67.781 bits (164), Expect = 1.262e-11 Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 0 Query: 14 GEGDD----TLPKECAVCGITSE-TFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDD 101 G GD+ + P++ VC I + L+YG TC C+ FF+R ++ R + C G CE+N R C+ CRF KCL+ GM V +D Sbjct: 266 GPGDNNNPSSQPQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKR--IYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVRED 356
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 65.855 bits (159), Expect = 4.353e-11 Identity = 35/89 (39.33%), Postives = 42/89 (47.19%), Query Frame = 0 Query: 14 GEGDDTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGT----CEVNPTTRKSCRKCRFNKCLEAGMKTDFV 98 G GD L C VCG S H YG +C C FF+R+I R R + CK G C ++ T R CR CR KC + M D V Sbjct: 98 GTGDRLLDIPCKVCGDRSSGKH--YGIYSCDGCSGFFKRSIHRQR--IYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAV 182
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 65.0846 bits (157), Expect = 5.942e-11 Identity = 32/75 (42.67%), Postives = 41/75 (54.67%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFV 98 C VCG S H YG TC C++FF+R + RS F C+ +C V+ R C+ CRF KCL GMK + V Sbjct: 75 CVVCGDKSSGKH--YGQFTCEGCKSFFKRCVRRSLT--FQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAV 145
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000006454 (supercontig:LSalAtl2s:LSalAtl2s3535:4892:6220:-1 gene:EMLSAG00000006454 transcript:EMLSAT00000006454 description:"maker-LSalAtl2s3535-snap-gene-0.8") HSP 1 Score: 62.003 bits (149), Expect = 1.813e-10 Identity = 45/116 (38.79%), Postives = 55/116 (47.41%), Query Frame = 0 Query: 4 IKRKRVCIPKGEGDDTLPKE--CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSR--NPKFVC--KKGGTCEVNPTT----------RKSCRKCRFNKCLEAGMKTDFVLDDSQ 103 IK + C K GDD + ++ C VC + FH +YGA C CRAFFRR + R R NP C KG V P T R +C+ CRF CL GM VL D + Sbjct: 7 IKVGKRCTSKI-GDDDVGEDLLCRVCRVVEYQFH-HYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKG----VPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEK 116
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 60.4622 bits (145), Expect = 1.200e-9 Identity = 32/77 (41.56%), Postives = 41/77 (53.25%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKG--GTCEVNPTTRKSCRKCRFNKCLEAGMKTDFV 98 C VC S H YG C C FF+R+I R+R +VCK G+C V+ T R CR CR +C++ GM D V Sbjct: 34 CKVCTDHSSGKH--YGIFACDGCAGFFKRSIRRNR--LYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAV 106
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 59.3066 bits (142), Expect = 2.484e-9 Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFV 98 C VCG S H YG TC C++FF+R++ R N + C+ C V+ R C+ CR KC + GM+ + V Sbjct: 83 CVVCGDKSSGKH--YGQFTCEGCKSFFKRSVRR--NLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAV 153
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|6094474|sp|Q91279.1|THB_PAROL (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 90.1225 bits (222), Expect = 8.818e-18 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 32 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 117
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|215273960|sp|Q9PVE4.2|THB_DANRE (RecName: Full=Thyroid hormone receptor beta; Short=TR-beta; Short=TRb; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=Thyroid hormone receptor beta-1; Short=TRbeta1) HSP 1 Score: 90.1225 bits (222), Expect = 9.397e-18 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 32 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 117
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67461034|sp|Q76KB1.1|HS2ST_CHICK (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=cHS2ST) HSP 1 Score: 89.3521 bits (220), Expect = 1.015e-17 Identity = 52/150 (34.67%), Postives = 81/150 (54.00%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + H+ Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A+ +C+ + I +FCG S C SR AL +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L Sbjct: 139 YHGHVSYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAAGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWALEQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATEL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67461002|sp|Q5R621.1|HS2ST_PONAB (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2OST) HSP 1 Score: 88.1965 bits (217), Expect = 2.764e-17 Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + H+ Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + I +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L Sbjct: 139 YHGHVSYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWAMDQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATEL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67460984|sp|O93336.1|HS2ST_XENLA (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1) HSP 1 Score: 88.1965 bits (217), Expect = 2.815e-17 Identity = 59/180 (32.78%), Postives = 92/180 (51.11%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQLKSEERMNKSGGHNLKREEAFLKNLKAKLAQ 1020 + H+ + F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A+ +C+ + I +FCG S C SR AL +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L + KS ++A K AKL Q Sbjct: 139 YHGHVSFLDFTKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAAGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWALDQAKYNLVNEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRSGK--KSHLRKTTEKKAPSKETTAKLQQ 306
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67461059|sp|Q8R3H7.2|HS2ST_MOUSE (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2-OST; Short=2OST) HSP 1 Score: 88.1965 bits (217), Expect = 3.002e-17 Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + HI Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + P +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T L Sbjct: 139 YHGHISYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWLQIP----FFCGHSSECWNVGSRWAMDQAKSNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATDL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|68052326|sp|Q7LGA3.1|HS2ST_HUMAN (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2OST) HSP 1 Score: 87.8113 bits (216), Expect = 3.143e-17 Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + H+ Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + I +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L Sbjct: 139 YHGHVSYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWAMDQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATEL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 87.8113 bits (216), Expect = 3.795e-17 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLLKK 114 C VCG + +H Y TC C+ FFRR I+++ +P + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+++ Sbjct: 19 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLIEE 106
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67460981|sp|O08889.1|HS2ST_CRILO (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2OST) HSP 1 Score: 87.4261 bits (215), Expect = 4.621e-17 Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + HI Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + I +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T L Sbjct: 139 YHGHISYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWAMDQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATDL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|586094|sp|P18113.2|THB_RAT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta) HSP 1 Score: 88.5817 bits (218), Expect = 5.248e-17 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I++S +P + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 107 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDS-KRLAKRKLI 192
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|1228400227|ref|XP_021959075.1| (heparan sulfate 2-O-sulfotransferase pipe-like [Folsomia candida] >gi|1215262716|gb|OXA49035.1| Heparan sulfate 2-O-sulfotransferase pipe [Folsomia candida]) HSP 1 Score: 95.9005 bits (237), Expect = 1.905e-17 Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 0 Query: 860 IWISLVRDPVERFISRFYYIRRQAER-FKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGI--TQLKSEERM 996 ++I++VRDP+ER IS +YY+R R F AK R+ + ++WL C+ DEC + S + +FCG D C N AL++A E++ + +S+VG+LEE L E+ P+ F G T LK++E M Sbjct: 143 VYINMVRDPLERMISWYYYMRLGGVRNFVAKMRKNNKPEDDKWLQRDFSTCVLQNYDECRFEGAHENVWSQMMFFCGMDERCNEKNGAWALSRAMENVDKYYSVVGVLEELDLSLEVFEAYIPRVFAGARETYLKNKETM 282
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|1942117|pdb|2NLL|B (Chain B, Retinoid X Receptor-Thyroid Hormone Receptor Dna-Binding Domain Heterodimer Bound To Thyroid Response Element Dna) HSP 1 Score: 88.5817 bits (218), Expect = 2.544e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I+++ +P + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 4 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS-KRLAKRKLI 89
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|345505251|gb|AEN99848.1| (nuclear receptor subfamily 1 group A member 2, partial [Oncorhynchus mykiss]) HSP 1 Score: 89.3521 bits (220), Expect = 2.977e-17 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0 Query: 5 KRKRVCIPKGEGDDTLPKE--CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLLKK 114 +RK + G L K+ C VCG + +H Y TC C+ FFRR I+++ NP + CK C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+++ Sbjct: 2 RRKHEAMQNGYIPSYLDKDELCVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEAKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLIEE 110
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|528509686|ref|XP_005159562.1| (thyroid hormone receptor beta isoform X6 [Danio rerio]) HSP 1 Score: 93.5893 bits (231), Expect = 3.464e-17 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 7 KRVCIPKGEGDDTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 K+ IP D L C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 111 KKGYIPSYLDKDEL---CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 210
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|1207139707|ref|XP_021323666.1| (thyroid hormone receptor beta isoform X5 [Danio rerio]) HSP 1 Score: 93.5893 bits (231), Expect = 4.402e-17 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 7 KRVCIPKGEGDDTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 K+ IP D L C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 111 KKGYIPSYLDKDEL---CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 210 The following BLAST results are available for this feature:
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold89_size390429:262326..282335+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold89_size390429-processed-gene-2.6 ID=snap_masked-scaffold89_size390429-processed-gene-2.6|Name=heparan sulfate 2-o-sulfotransferase pipe|organism=Tigriopus kingsejongensis|type=gene|length=20010bp|location=Sequence derived from alignment at scaffold89_size390429:262326..282335+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'heparan sulfate 2-o-sulfotransferase pipe' has the following synonyms
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