maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1, maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1475_size39547-snap-gene-0.8-mRNA-1
Unique Namemaker-scaffold1475_size39547-snap-gene-0.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1475_size39547supercontigscaffold1475_size39547:7369..9530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein L798_11919 partialmaker-scaffold1475_size39547-snap-gene-0.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:exon:3maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:exon:3Tigriopus kingsejongensisexon
maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:exon:4maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:exon:4Tigriopus kingsejongensisexon
maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:exon:5maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:exon:5Tigriopus kingsejongensisexon
maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:five_prime_utrmaker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1475_size39547-snap-gene-0.8-mRNA-1:cds-1957499Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1957500auto1957500Tigriopus kingsejongensispolypeptide
Tk06639Tk06639Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06639

>Tk06639 ID=Tk06639|Name=Tk06639|organism=Tigriopus kingsejongensis|type=polypeptide|length=507bp
LCPPWIRLEHANMYAGFSPPRNGMTFNASLATPKRGGASASLGSSPYPSS
SPGRHLLSSSPLSWLAGRDHGGSPLSTSPPFKPPGEATPAHWASSPRVLL
DWSQRRPESPHHLAMRLGPQPEAAAPPPESPTWLRPLPDSPHGLSQGGGP
RDTGKRGRPRADHINHLIIKGSSSPSEIKCKVCSRVFPREKSLQAHLRTH
TGERPYLCDFPGCAKRFTQSGQLKTHQRLHAGEKPFVCSAHGCGNRYTHA
NRQCPLHPLHKPQRSTELVLQPVFANGEDRSTILQWLSKYRQEREEKTPG
KVPRLASPSLTDAENPWVSALDLQPGSPHDLNQPKKCKTKRGLDTELEQE
NRPQSENVSLPEPSILAARLGISPHRQTLGDITPTKSSSNVLKIKKRWLQ
GIFDEEKQRQEAASPLGPTLSSPSSTSSPHRASSKSFSEDLACPIQWNED
DEDAPLGTSISAPRSPKSWVVARALVDLKASRATMSGEQEDNQPLNLSVP
KRSSLDP
back to top

mRNA from alignment at scaffold1475_size39547:7369..9530+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1 ID=maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1|Name=maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2162bp|location=Sequence derived from alignment at scaffold1475_size39547:7369..9530+ (Tigriopus kingsejongensis)
CGCGGATTGGCCCCGTCGCGCGCTGTCTGCGAACCCTGAAACCCAACCTG
AGCCATGGCCGTAGACTTAGAACTCGAGGAGTGAGGCCACTGGGCAGGGA
CAGCTGAAACTGGGAGGCGCCCCGGTCCAGCCCGCCTCTTCAGAGGGACG
AAGGGCCCTCCCCTGGAGCTTCTTCAGTCCCCCCTAGGACAAACTGCTCT
GCCCAGCACCAGATCCCCGCCAGCCCTAAGCCCCAGCGCCTGAGTCCGCC
CCCCGGCCTCGGCCCTTCGGCTCCATCCAGCCCGAGCGAGTCGGTGGCTC
GAACTCCGCGCGTTTTCGAACAAGCTATTTAACTTGAGTTCGCTTCTGCC
GCTGGCTCGGAGGCACGGGTCATTTAAAGAGCCTTTTAAAGTGGGCTCCT
GCCTCGACATTGGGCGTTCTCAGCCTCAGTCAGTCCGTGTGAGCCTTCGT
CCGGACCTGCCGAGTGCCCGCCCTGTGCCCGCCCTGGATCCGGTTGGAGC
ATGCCAACATGTACGCCGGATTTTCGCCCCCGAGAAACGGCATGACGTTC
AACGCCAGCCTGGCCACGCCCAAGCGGGGTGGTGCGAGCGCCAGTCTGGG
CTCCAGTCCCTATCCGTCCTCGTCGCCCGGGCGCCACCTCCTCAGCTCGA
GCCCGCTCTCCTGGCTGGCCGGACGGGACCACGGGGGCAGCCCGCTCTCG
ACCTCGCCGCCCTTCAAGCCGCCCGGCGAGGCCACTCCGGCCCATTGGGC
CTCGTCCCCGCGGGTCTTGCTGGACTGGAGCCAGCGACGACCCGAGTCCC
CGCACCACTTGGCCATGCGGCTGGGCCCGCAGCCGGAGGCTGCGGCTCCG
CCGCCCGAGAGTCCCACCTGGCTGCGCCCGCTGCCCGACTCGCCCCACGG
GCTGAGCCAGGGCGGTGGTCCGCGAGATACGGGCAAGCGCGGCCGACCCC
GAGCCGACCACATCAACCACCTGATCATCAAGGGCTCGAGCTCGCCCAGC
GAGATCAAGTGCAAAGTCTGCAGCCGCGTCTTTCCCCGCGAGAAATCGCT
TCAGGTGAGTGAGCTGGACCCGCCGGTCGGACGCCCTCGAACCAGGCGAC
TAATTGGATCTGGATTGATTTCCCGTAGGCTCATTTGCGGACCCACACGG
GCGAGCGACCCTACTTGTGCGACTTCCCCGGCTGCGCCAAGCGCTTCACC
CAGTCCGGCCAATTGAAAACCCACCAAAGGCTCCACGCGGGCGAGAAGCC
TTTCGTGTGCTCAGCCCACGGGTAAGTTCCCCATCCGCGCCGCTTGTCTC
CCTCGCCCCCCAGTGGCTGACTTGCTCTCTCGCCTTGCAGATGTGGGAAT
CGCTACACCCACGCCAATCGCCAGTGTCCGCTCCACCCGCTCCATAAGCC
GCAGCGCTCCACGGAGCTCGTGCTCCAGCCCGTCTTCGCCAATGGCGAAG
ACCGCTCGACCATTCTCCAATGGCTGTCCAAGTACCGCCAAGAGCGCGAG
GAGAAGACCCCGGGCAAAGTGCCCCGGCTGGCCTCGCCCAGTCTCACCGA
CGCCGAGAACCCTTGGGTGTCGGCCCTTGATCTCCAGCCTGGCTCGCCTC
ACGATCTCAACCAGCCCAAGAAATGCAAGACCAAACGGGGTCTGGACACG
GAATTGGAGCAGGAGAATCGGCCCCAGAGCGAGAACGTTTCGCTGCCAGA
GCCCTCCATCCTGGCCGCCCGCCTCGGCATCTCGCCTCACCGCCAAACCC
TGGGTGACATCACACCCACCAAGTCCTCGTCCAATGTGCTCAAAATCAAG
AAGCGCTGGCTCCAGGGCATATTCGACGAAGAGAAACAGCGCCAAGAGGC
GGCCAGTCCCCTGGGACCCACCCTCTCTTCGCCCTCATCCACCTCCAGTC
CCCATCGGGCCTCTTCCAAGTCCTTCTCCGAGGATCTGGCCTGTCCGATC
CAGTGGAATGAAGACGACGAAGATGCGCCTCTGGGCACCTCGATCTCCGC
CCCTCGCTCGCCCAAGAGTTGGGTCGTGGCCCGAGCCCTGGTGGACTTGA
AGGCCTCCAGAGCCACCATGTCCGGCGAGCAGGAAGACAACCAGCCCCTC
AATCTTTCAGTGCCCAAGCGATCCAGCTTGGACCCATAAACACGCTTAAA
CGCCCCCCCCCC
back to top
Add to Basket