snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1, snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1
Unique Name	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold119_size336447	supercontig	scaffold119_size336447:20847..27964 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
rho-related gtp-binding protein	snap_masked-scaffold119_size336447-processed-gene-0.0	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:exon:83	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:exon:83	Tigriopus kingsejongensis	exon
snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:exon:84	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:exon:84	Tigriopus kingsejongensis	exon
snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:exon:85	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:exon:85	Tigriopus kingsejongensis	exon
snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:cds	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:cds	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:cds-1965722	Tigriopus kingsejongensis	exon
snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:cds	snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1:cds-1965723	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1965724	auto1965724	Tigriopus kingsejongensis	polypeptide
Tk11767	Tk11767	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold119_size336447:20847..27964+

protein sequence of Tk11767

>Tk11767 ID=Tk11767|Name=Tk11767|organism=Tigriopus kingsejongensis|type=polypeptide|length=519bp
MATPEAQMSILSRIETKPLRTNERVMTTVVKGLDFGVNKMDYIPTSFDKV
LATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISL
QNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGP
VSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRG
DLPRSPSSASSSTHKHLLNNSFGSQSDLSLPKKSGSACSSLKKRAQNISF
SSSENEMAINSTVPPILEDDVFPGVSSQSRSPRLSHGDKARIRSKSQHRV
SMAPTRNELAFMVEEEPAPPPLFTSTTNRSSCTAINIHSTTSQSPVSPAQ
AQVRANGLSRRTSFLAQTKPHGALSVESPSSPLGSVSSSSCYDLKSPVMS
THSVPTSSYEIKPNGLKVLGFESLKSHASTGSQGSTGSKTSTGSSYGSTS
TAAAHLRKRGSLMPKDPSVPDTEDPELLRNLQYVSPKAGVYRPINSNGTA
AGHNSSGNGGKGKKNCTIM

mRNA from alignment at scaffold119_size336447:20847..27964+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold119_size336447-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7118bp|location=Sequence derived from alignment at scaffold119_size336447:20847..27964+ (Tigriopus kingsejongensis)
ATGGCGACACCTGAGGCTCAGATGAGCATTCTCAGTCGCATTGAAACCAA
ACCCCTGAGAACGAACGAGCGAGTTATGACAACTGTGGTCAAAGGATTAG
ATTTCGGCGTCAACAAAATGGTGAGTACCTCTTTTTTGAGACTATGTGTG
TCGAGCTGGTCGAGAGCTTCATGGGAAGAGGAGCACGGCCACGCAGACGG
TCTCATTCCCAGTCCAGGTTGAACAAGTTGGCCCAGGGATTCGAGAGCAA
ATGGACGAGGGTCGTCGATCTGGAATTCTCCCAAAATAGTTGACACTGGC
AGAGGCGACAGTTGGGGACATTTTTATGGGGAGCGTCGACCCAATGCAAT
GAAATGGCAGGCCAGAAATGGATGGCTATTCAATTTTCCCTCGATCCCCT
CACCCACATTGAGCTGGGGACGGATTTGTCACCCATTGGGTGCAATGTGG
TGCCTGAGCCAATGGTGTGCATCAAGAGATTTACATCTCGACGATGCCCG
AGTCCACTCTCCCAATTGGGATGTTTTGAGGTGACCTCGATCTTTGGATG
CATCCGACGCTAAGTGTAATTCCATTGCCAGTGCATTGCGAGGGTCGTGA
ATACAATCAGCCTCTCACTGAGATGTCAATGTCAAATTGACCGTGACTGG
TCGAGATCATCGCGGCCATTTTGAGAGATGAGAAACGGATTGAGTTGACA
CTCAAATCATTATCGCCGTGTCCCATGGCCTCTGAGCAAACAAGTTTGGG
TTTCGGCCCTGTTTGGGGAACGGATCCGAGAAAAATGCGCCCTTTGAAGC
AGATTGGACAGCTCTCACAATGGACATGCAACTGATCCATTCCCAAATGA
TGACGAGGTTGTTTGCGGGCCAACTGACATTGTGTGACCTTCACAATATA
CGACTTTGTCTGTCCCAAATCATTGCAGAATAACTAGCATTGAAGCATCT
CTGACTTGCATCCACTCCAGGGACTAATGCTTCCTTGGTATCTTTATATG
CAGTAGTTGTAGTTGCACTTGGGCCAATCGCTTTAAGCGTCACTTCTCAC
ACCTCTGTGGAGATCTTCGATGTTGGCACTGGAAAAACGCTCCGAGCATC
GCTGTTCACATGCGTGAAGGGTGTCATAAAGTAAGGTAGTTTATCTGGAT
ATGGATCGGAAAACAGGATTTCTCTCTCTCTCTCAACTCGAGATGTTCAG
ATTGCCTCGCAGAGGAAGTTGAACCACTGAAAAGACAACTCAAGATGACG
TTGACCTTGCTTCCGTATGTCCGGAGTCGCTCTAGAATCTGGTCATGCAG
CTACATGTAGCATGGGACACGTAAATGTGGAGGATGCCACCACCTTAAGC
CAGAGGAGCTCACATTGACCAAGAGCCGATTCAGGGCGGAGGAAATAATG
GGGACTTTATAATTAAAGTGTCAGCCTGTGCATTTTTCGGATGGACAGGG
GAATTGTGTTCAGATTGAGGCCACAATTGTTTGGCCACCTTTCATTATGG
CGGACAAGTGCTGCACCTTTTGGAATCACTCGGAGCAAACGTGTGTTCTA
GTTTCATCCGGAAAAGTAAGGTGCCGAAATCATACTAAAATGTCGGCCTT
AAGGGCAAAGAAACAGACAATCTCTGAGAATATCCCAAAAGGCCGTTCTG
TCACACCACTTTTACGTTATCACTTATTACGTAGTAGCCTAAGCATGTCT
TGTCAAAGATACAATGGCAGAAATACTCGCAGCATTGGCGGAAGCATTGT
CCAAATATCGACATTGGAAGATGTTGACGAAATTCTGGCCCCAGCTTGGA
CTCTGAAATGATTCAAAACCGACATTCTCCAGCCACCAGTGTCGGTGCAT
CACTACCATGGAGGATTCGGTTGTGTTTGGGTTGTCTTTTTCTGCAATCT
CCCCGGCTTGTTTGTCGTCCATCCGAGGCATTATTTTTTTATTGTCGGCT
GACGTTCACCTTGGATCAATCCAAGGTTGGTGTTGCCTAGGTTTTGCATT
AGAAGTGCTTGATCAAAATTATCAGTCCGCTATGCACTTCTTCGATGCTT
GGTAGTTTGACTGAGTTGAGGTCTTGAGGAGGCCATTCGAGACGATTGCA
CCCCACTTTGGGGATACATTGGGACATGATGAAAGCTGAAAAGTTAGGCT
GGCGTTTATCACTAAATCAAACGAGTCAATCCTTCTTCCTCCCCTTCCAG
CTCTTTGGCTCCAAAAGAGCGTCGAAAGTGGACTACAACTCCATTCTGCT
CCCGAAATGAGGTGCATTCGTGGAGTAAATGGCAAAACTTTGGGGTTTCT
GTCATCAAGTGCATTAGTTGGCATTTCATACACGAGTGGAGGCGACTACG
AGAACATTGTTGGTGATTAGGCATACGTAAACGTCGTGAGATAGGGGATG
GTGGGCAATCGGTGGTACATTAAAGCTTTATCCGAGGGTCGTCGGTTCGA
TCCCCCGGGAAAGCTGAGTTCTGGCTTATAGTGTTCCTGGGTAAATTTCT
CCAATTTGTGCTTTTGTTGCGGGATTGCAATCTATCATGGTAAACAAAAT
GAATTCAAATGTTTCAAAAATATAATTACACATATAAGATGCCAATAGGG
CATAAATCATGAATAATCAGAGTATCAATTAGATAAACCCTGCCAATATT
ATCAGTCAATCTGTAGAACATAAAAACAGATATAAGCTTTTTTTCATCTC
TTAAAAAAACTGTTATCGCTAAGAACATAAAAATTCAGCAACCATGAATC
ATCAACAAGTCCTCCATTTTATCAAGAGATCCATCGAATACGGAACAAGA
CATAAAATTCCTGAAAAAATTGAAAACAAATTCGCAAAAATGCATTAGCA
CAAGGAAATTGTAATAGAAAATGCAAAAACGACATTTTGATAGTCCTGAA
AGCCCTTTGCTCTATCTACGAGAATAATGAAATAGTTCGTGCTTATTTCA
TCTGTATCAAACTGACATATTCTTAGCTAGAGGGCAACTTCTCGTATGTA
CTTAGGTGGCCACGTAACTTTTTACGCATATTCAGCCCAAAAAGTGGAAG
CTTCCCCAAAAATATGTTGCCCAGCACATGATCATCATTCGAACCCGTGA
GTCTCATGGAGTGGCAATATTTCACCCCTTTTCCAGTGTCATCAATGATG
CTTAAAACATTCAGCGTGATTTGCTGGTCAGTTACCAGTATATCGAAACC
ACGGCTAGCAGTCACCAATACAGTTGTCCAAAATTAGCCGATGTTTCTTC
GACTGTCCACTGGCTTTGTTATTAACACTTACAATTGGAATGAGTCCAAG
GCTGGGATCTGAACCATTTTACTGCCGCTTTTGTTTTTTAGGTATTTGTA
GAGGGAAATACCTGGAGTAAGACGCTGTCAATGGAAAACTGCAAATGGAT
GAGCCTCTTCTTTCATTTCCCCCTGCCTTTTATATGCTTACTATCCCTAG
TCGGGTTGCTGATCATTTGGATTTGCTGCACATACTCAATGTCCCTATTG
AACTAGTCGAATCTCCCCGTTTGTGTGCATATTCAGTCGAATGTTTTTTA
AATCACCATCCCTAGTGATGAATGCTGTTTGCCCGATTATTCACTCGCCA
TCCGTCGTCCACTAAAAACCTGGTAGGGGATGTTGGCTGTGTAAACATCG
CGAACATCTTCTTCCTCTGTGTGTTCATGGGGATTATTACCCTTTCCACC
GGCGGTAGTGGGACGATTGGGGGCCCAAAGTATGCACAGTTACCCTTCCG
AGTGGGGAAATAAGCCATCTTCTCACTTCCGATGCTCAGTCTAAACAGGA
GGTTCACGCTTTCTCGCAGCTCGGCGATTCCGAGTATCGTCTTCATTCAG
CTAACTGTGTTTACACACATGTTGTTAATTGTGCGTGCACTCGGAATTTC
GGTGTCGGAGACGAAACTCGAGTTGAGTGCCATGACGAGCGGAAATTTGT
CATCCGATATTGATTAGTTTCGGAAAACTTATCTCAGCCGGTTTGAAACA
ACCCACCTTATTCCTTTGAACCGCCTGTATACATGCACATGCTATAGGTA
CTATACCTAGTATAGGACAATGGGAAAGAAGGTGCGTAATGACGGAGGAG
GTGATCGCTTTTAGCTTGAAGGTCGAGATCGTCCTCTGGGGTGGTCTGAG
GAATATGTTTTCGCTCCAGGTTCTCAAACGCCTCTCATTTCCCCAGCAAA
ATTAATAAGTTCACATAAGAATGGCCATCCGAATACACGCGCAAACAAAG
GAACACCAAGGCATACACAGGCACAGGGCACAAAGCACGGCCATAACGTA
TTACGCTGGTTATCGCACTTGGACTATCCACCAGGGTGGCTACTAGCCAA
GTGGAGCCGTCAAGGTGATACTTATTGTGGTAAAGGGCATCTAAGCCTCT
GCTCAACTATGATTAGCTCCGGTTATAATGTTCAATTCAGACTGATTTCG
TGGCCTCGAGGCGGGTTGAAGCCTGGTCGAGCTAGACGATGAATTAAAAA
GTTCCACGCAAGTTGGCAAAGTAATTTCAGATTGTGTCTTAATCTTGGGA
CACAAAGTACGGCGAATATGCCCAGGTTCATTATGCAGACCCAGGTTGGT
CCCAACCACTCTATTGGATTACATGGGCAGAGCGAGATGGCCTCCTCGGA
AGGGTTAATAATCGGCTCCCGACCAGGGCGATAAGCCTAAGGAGGTCAGC
TCTGATTACGATTTCCCTTAAGGAGTCCCCTCCAGTGGATCTAAAGTTCG
ACTTGAATTTCTCATCGGCATGCTGGAACATGAAGTGGCAAATTTGGAGT
GACGGCAAATACTAATTCCAGTGCCATTCTTCAATCAGCTCTGCGGAAAT
AGCGAACACACGGAAAAATTGACGCCACTCAATGAAATGTTCGTGAGCGA
TTAAACCAAGTCCGAGGGTGTATTAGCCAGGAGCAGGCATGCCAATTTGG
CCCATCATTTCCTGGGCCCAGGGCTCGAATTATCCGAAGAACTGGAGCAT
GGGCCAATAATGATCGTATACGTATATGAAGTGTAATGAGAGCCTGATTT
TTCTTCCAGGACTACATCCCGACGAGCTTCGATAAGGTCTTGGCCACCCA
AGAAGTGAATAAGCACAAAGTGGATCTTGTGCTCTGGGACACATCAGGTG
AGACGAGCAGAAATAATGACATTACAATTATACGAGTACCTTAATACCCC
CGAAACAAGCCCGAGGACGCAGGAGCCTGAGAGGCCTTTGTTGGCAGCAG
CAGCAGCTGCTGCAAGCCGGCTTAGTTGTTCGAGATTATCTTCGGTTGAA
ATCAGGTCATCCTTGAGAAGCCGAAGGCGAAAAATAGACCCTCAAGCCAA
CTTGACACCATTGATAAGCAATGATTCATGGTTCTACTCGGAGGAAATCC
CGCTTCTTTTCAAGGCACAGATAGGGTCGAGGATGAAGAGTGGGCTTGGG
TGTGTGTATTCAATGCAACAAATTCAATGGGCCAACTCCCAGGATATCGC
CTTGTTTCGATCGAAGATGGGGACTTGATTAGATTGAGGTGATGCACGAG
CCCAGGGAAACGTAAATATTTATGGCCCTGGAAAAGCAGGGGCCCAAGTG
TAATCAATGGATGGCCAAGCCATGTTTGTTGGGGACCCTTGGGGTTTCCC
CCGGCTAGTCTAGCCAGGGTTTCCCTGTGCATGTCACGGAGTTGGTCCTC
CAGTTTATGGGTGACAATTATTTTTGAGTAGCACTTCCCTCAACCCTCTC
CTCCCTCTCGTTTCAGGCTCTCCGGCGTATGACTCGGTCCGATCCCTATC
CTATCCGGATGCCGATGTGTTTTTATTGTGCTACAAAATCGCCGATCCCA
TTTCCCTGCAAAATGTCAAAACCAAATGGATGCCGGAAATCCGCCGACAC
GACCATGGCGGTCACGGAGCCGTGCCCATCATCTTGTGCGGCTGTCAGTC
CGACCTGCGCTCCGATGCGGGCGTCTTGGAGCAGCTGTCGAAAGTGGGAC
GAGGCCCAGTCAGTCAGGAGCAGGGCCTGGGGGTTTGCTGTGAAGTGGGG
GCTGTGAACTACATCGAGACCAGCAGTGCCATGGCCTACGAGTCCCGCAG
CGAGGTCCACGAAGCCTTCGAGCTATGCGCCTTAGCCTTTATCAAGAGTG
GGCGCGGCGATTTGCCGCGAAGCCCCTCATCCGCCTCCTCCTCCACCCAT
AAACATCTCCTGAACAACTCCTTCGGGTCCCAATCTGACTTGAGTTTGCC
CAAGAAAAGTGGAAGTGCCTGCTCCTCCCTGAAGAAGCGAGCCCAAAACA
TCTCATTCTCGAGCTCAGAGAACGAAATGGCCATAAATTCGACGGTGCCT
CCCATTCTTGAGGACGATGTCTTTCCGGGTGTATCTAGTCAGAGTCGGTC
GCCCAGGCTTTCGCATGGGGACAAGGCGAGAATCAGGAGTAAATCTCAAC
ATCGGGTCTCAATGGCTCCCACGAGGAATGAGCTGGCCTTTATGGTGGAA
GAGGAACCTGCGCCCCCGCCGCTCTTCACCAGCACCACCAATCGCTCCTC
GTGCACTGCCATCAATATTCACTCCACCACCTCTCAATCACCGGTCTCCC
CAGCCCAGGCCCAAGTGCGGGCCAACGGCTTGAGTCGGCGGACCTCGTTC
CTGGCCCAGACGAAGCCGCACGGGGCACTGAGCGTGGAATCCCCTTCCTC
TCCCCTGGGGAGCGTCTCTAGCTCCAGTTGCTATGACCTCAAATCCCCGG
TGATGTCCACCCATTCCGTGCCGACTAGCAGCTATGAGATCAAGCCGAAC
GGGCTCAAAGTCCTGGGCTTTGAGTCCCTCAAGTCCCACGCCAGCACCGG
AAGCCAAGGCAGCACGGGGAGCAAGACCTCCACCGGAAGTAGCTATGGAT
CTACGTCCACTGCCGCCGCTCACCTACGGAAACGGGGATCCCTAATGCCC
AAGGATCCCTCCGTCCCCGACACAGAGGACCCCGAGCTGCTGCGGAACTT
GCAATACGTGTCTCCCAAAGCGGGCGTCTATCGGCCAATCAACTCTAATG
GCACTGCCGCAGGACACAACTCGAGCGGTAATGGAGGCAAGGGCAAAAAG
AACTGCACCATCATGTGA

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