snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1, snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1
Unique Namesnap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold599_size127490supercontigscaffold599_size127490:14992..16465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
paired box protein pax-6snap_masked-scaffold599_size127490-processed-gene-0.2Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:exon:1126snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:exon:1126Tigriopus kingsejongensisexon
snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:exon:1127snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:exon:1127Tigriopus kingsejongensisexon
snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:exon:1128snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:exon:1128Tigriopus kingsejongensisexon
snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:cds-1962314Tigriopus kingsejongensisexon
snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1:cds-1962315Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1962316auto1962316Tigriopus kingsejongensispolypeptide
Tk02590Tk02590Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02590

>Tk02590 ID=Tk02590|Name=Tk02590|organism=Tigriopus kingsejongensis|type=polypeptide|length=409bp
MSKMSPAMPVPSSPLQASFIDHLRGLRDKGDGLGGLDLASQMSALSALSV
QQRQFLELQQRYLSMNRLPWMGGSSPLVVSSAPTMSTSVLHPTATRMSPT
ISPLGPKRPNGMIGGSKPKVATPEVVGKIESYKHENPTIFAWEIREKLIA
DGVCTNSTAPSVSSINRILRNRAAERAATEYARTAGMIHGMYPNYAPHPY
YSPSLLSQLGHHPPPSGLLASPPKSHTEFSKLKRDEECPKSPLTPIDVDG
RSEAESCSDDEKPQFRRSRTSFNSDQLDLLEKEFEKSHYPDLKTREDLSA
RTSLTLMQLLSVQVWFSNRRAKWRRHHRVGLFRPFEVGTPSLPATTESPI
HHSDTRSPRSPSGGVSPPPSHLQTPLTLNPALGIDFTKIFAKAQEERMRL
EGLTSQRAD
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mRNA from alignment at scaffold599_size127490:14992..16465+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1 ID=snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1|Name=snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1474bp|location=Sequence derived from alignment at scaffold599_size127490:14992..16465+ (Tigriopus kingsejongensis)
ATGAGTAAGATGTCGCCCGCCATGCCAGTTCCCAGCTCACCCCTTCAAGC
CTCGTTCATCGATCACCTCCGTGGCCTCCGCGACAAGGGTGATGGCCTTG
GTGGCCTTGACTTGGCCAGTCAAATGTCGGCCCTGTCCGCCCTCAGTGTG
CAGCAGAGACAGTTCCTGGAGCTTCAGCAGCGCTATCTGAGCATGAACCG
ACTGCCTTGGATGGGGGGTTCAAGCCCCCTCGTGGTCTCCAGCGCTCCCA
CCATGTCCACCTCGGTGCTACACCCCACCGCCACGCGCATGAGTCCCACC
ATATCACCGTTGGGGCCCAAACGACCCAATGGTATGATTGGGGGCTCCAA
ACCCAAGGTGGCCACCCCTGAAGTGGTGGGCAAGATCGAGTCCTACAAGC
ACGAAAATCCCACCATATTCGCTTGGGAGATCCGGGAGAAGCTCATTGCC
GATGGTGAGTGTCTATTTTTCCTCTTTAGCATGTGGCGTGGGTTTTTTTT
CACAAGGCCGGGAGGGGCGGAGGGGAGATCGGGGGCCTTAATTTCTTGTG
TAAGAAAGGAAATTCACATCTCCATGTGTGCACATGTGTGTGTGTACATT
CACCAATTACCTGCCCTGACTAATCATCCATCCTCGACCCCACAGGTGTG
TGTACAAATTCGACGGCCCCCAGCGTCTCAAGCATTAATCGCATCCTCAG
GAATCGGGCAGCCGAGCGTGCAGCCACCGAGTATGCTCGAACAGCTGGGA
TGATCCATGGGATGTACCCCAACTACGCTCCCCATCCTTACTACTCGCCC
TCGCTCCTGTCCCAATTGGGACATCACCCTCCCCCCTCCGGACTCCTGGC
CTCGCCCCCCAAAAGCCACACGGAATTCAGCAAGCTGAAGCGGGACGAAG
AGTGTCCCAAGAGCCCCCTCACCCCCATCGACGTGGATGGCCGCTCGGAA
GCGGAGAGCTGCTCGGACGATGAGAAGCCTCAATTCCGACGTAGCCGAAC
CTCTTTCAATTCCGACCAGCTGGATCTCTTGGAGAAGGAGTTCGAGAAGA
GTCATTACCCTGACCTCAAGACCAGAGAGGACCTCTCGGCCAGAACCAGT
CTCAGTGAGGCGCGAATCCAGGCAAGTTGATGACTCTTCGCTATCGCTGG
ATTCTAGCTCTAATGCAGTTGCTCTCTGTCCAGGTCTGGTTTTCCAATCG
CCGAGCCAAGTGGCGACGTCACCATCGTGTGGGTCTGTTCCGGCCTTTCG
AGGTCGGAACCCCGTCCCTTCCAGCCACCACAGAGAGTCCTATTCACCAT
TCCGACACTCGGTCGCCTAGATCTCCCTCGGGAGGCGTGTCACCGCCCCC
CTCCCACCTTCAAACGCCCTTGACACTGAACCCCGCCCTGGGGATCGACT
TCACCAAGATCTTTGCCAAAGCCCAAGAGGAGCGAATGAGATTGGAAGGC
CTAACTAGCCAGAGGGCTGACTGA
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