Tk02837, Tk02837 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02837
Unique NameTk02837
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length305
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 197..225
score: 56.06
coord: 114..127
score: 59.06
coord: 293..305
score: 39.29
coord: 259..284
score: 65.67
coord: 173..188
score: 31.63
IPR021190Peptidase M10APIRSFPIRSF001191MMP_stromelysincoord: 28..304
e-value: 2.8E-86
score: 288.0
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 143..303
e-value: 2.3E-33
score: 126.9
IPR024079Metallopeptidase, catalytic domain superfamilyGENE3D3.40.390.10coord: 49..304
e-value: 5.4E-77
score: 260.6
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 146..304
e-value: 6.4E-49
score: 165.7
IPR002477Peptidoglycan binding-likePFAMPF01471PG_binding_1coord: 66..114
e-value: 9.4E-9
score: 35.3
NoneNo IPR availablePANTHERPTHR10201MATRIX METALLOPROTEINASEcoord: 40..303
NoneNo IPR availablePANTHERPTHR10201:SF177MATRIX METALLOPROTEINASE-2coord: 40..303
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 139..304
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR021158Peptidase M10A, cysteine switch, zinc binding sitePROSITEPS00546CYSTEINE_SWITCHcoord: 117..124
IPR033739Peptidase M10A, catalytic domainCDDcd04278ZnMc_MMPcoord: 146..302
e-value: 1.07889E-70
score: 213.99
IPR036365PGBD-like superfamilySUPERFAMILY47090PGBD-likecoord: 63..124

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1267_size51716-processed-gene-0.1-mRNA-1snap_masked-scaffold1267_size51716-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02837 ID=Tk02837|Name=Tk02837|organism=Tigriopus kingsejongensis|type=polypeptide|length=305bp
MMSNNHRTAVETFCSILLGLVIFPGVISAPSYLTDSHVAATRSINQRSRT
SRDTSSAVITQNRITYLAQFGYLPRSETESLVTDHQVRDALRNLQFMAGL
SVTGELDLDTLDLMGRPRCGVPDVTHSGYRNKRSVRNKRYSLQGQRWSKT
NLTWNLKKGPTLGLDHNLVRRELSYALELWARESSLTFQEVGPDDVADIG
VFFHRGFHGDGYQFDGSGSVLAHAFFPGSGRGGDVHFDDDEQWSEHRMNT
HDLTSVFAVAAHEFGHSLGLSHSGVEGSLMYPWYSGVPDDYNLPEDDRKA
VQILS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021190Pept_M10A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom_sf
IPR001818Pept_M10_metallopeptidase
IPR002477Peptidoglycan-bd-like
IPR021158Pept_M10A_Zn_BS
IPR033739M10A_MMP
IPR036365PGBD-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
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