Tk04567, Tk04567 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04567
Unique NameTk04567
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length920
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..216
NoneNo IPR availableCOILSCoilCoilcoord: 799..826
NoneNo IPR availableCOILSCoilCoilcoord: 836..866
NoneNo IPR availableCOILSCoilCoilcoord: 75..100
NoneNo IPR availableCOILSCoilCoilcoord: 163..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..320
NoneNo IPR availableCDDcd03488Topoisomer_IB_N_htopoI_likecoord: 372..586
e-value: 8.63039E-121
score: 363.583
NoneNo IPR availableSUPERFAMILY46596Eukaryotic DNA topoisomerase I, dispensable insert domaincoord: 796..867
IPR001631DNA topoisomerase IPRINTSPR00416EUTPISMRASEIcoord: 653..667
score: 71.43
coord: 516..525
score: 71.07
coord: 738..752
score: 80.0
coord: 680..696
score: 64.29
coord: 630..649
score: 65.71
coord: 872..883
score: 72.92
IPR001631DNA topoisomerase IPANTHERPTHR10290DNA TOPOISOMERASE Icoord: 179..920
IPR013499DNA topoisomerase I, eukaryotic-typeSMARTSM00435topeucoord: 516..892
e-value: 4.3E-254
score: 860.1
IPR013030DNA topoisomerase I, DNA binding, N-terminal domain 2GENE3D2.170.11.10coord: 476..585
e-value: 2.9E-97
score: 326.5
coord: 358..387
e-value: 2.9E-97
score: 326.5
IPR014711DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-typeGENE3D3.90.15.10coord: 588..741
e-value: 1.9E-66
score: 224.9
IPR013500DNA topoisomerase I, catalytic core, eukaryotic-typePFAMPF01028Topoisom_Icoord: 588..819
e-value: 7.2E-101
score: 336.1
IPR013500DNA topoisomerase I, catalytic core, eukaryotic-typeCDDcd00659Topo_IB_Ccoord: 594..793
e-value: 1.21953E-84
score: 268.376
IPR025834Topoisomerase I C-terminal domainPFAMPF14370Topo_C_assoccoord: 851..920
e-value: 1.1E-32
score: 111.7
IPR013034DNA topoisomerase I, DNA binding, N-terminal domain 1GENE3D1.10.10.41coord: 388..475
e-value: 2.9E-97
score: 326.5
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-typePFAMPF02919Topoisom_I_Ncoord: 372..585
e-value: 6.9E-95
score: 316.5
IPR014727DNA topoisomerase I, catalytic core, alpha/beta subdomainGENE3D1.10.132.10coord: 742..920
e-value: 1.3E-72
score: 245.2
IPR018521DNA topoisomerase I, active sitePROSITEPS00176TOPOISOMERASE_I_EUKcoord: 865..883
IPR036202DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamilySUPERFAMILY56741Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragmentcoord: 355..586
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 588..795
coord: 867..916

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold462_size163801-snap-gene-0.41-mRNA-1maker-scaffold462_size163801-snap-gene-0.41-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04567 ID=Tk04567|Name=Tk04567|organism=Tigriopus kingsejongensis|type=polypeptide|length=920bp
MGENGVETTLMNGNNGSTDHGDADVKNGFHEGKSEHRSSSSSKHKSKDKE
RRKETEEERRIRKDKEKKDRDDRHKKEGRREETEEERKIRKEKERREREE
RYKKEGKRPETEEERRIRKEKERKDREDRSKKEGRREETDEERKIRKEKE
KKDRDDRPKRDGKRDESEEERKIRKERERKEREDRHRSKGKETEEERRER
KERERKERKEKEHKDREGTESQEDEDTNGQSEDPMDDDSQDSQASMKEEP
MDGEDSEEDKPLARNSKKRKVNDDEDEFQPDDDDDEDVPIAKRKRVKKEE
PRYKEEDDDYQEDVKPAKSKKKAKPEKKTPSKPASSSASSNPRGGKKVKK
EENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEG
KRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEII
RDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTID
GHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPK
PPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKY
EKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKD
EDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEK
RVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNAS
ITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMT
NLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLM
EQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYN
KTQREKFRWAIEMAGPEYQF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001631TopoI
IPR013499TopoI_euk
IPR013030DNA_topo_DNA_db_N_dom2
IPR014711TopoI_cat_a-hlx-sub_euk
IPR013500TopoI_cat_euk
IPR025834TopoI_C_dom
IPR013034DNA_topo_DNA_db_N_dom1
IPR008336TopoI_DNA-bd_euk
IPR014727TopoI_cat_a/b-sub_euk
IPR018521TopoI_AS
IPR036202TopoI_DNA-bd_euk_N_sf
IPR011010DNA_brk_join_enz
Vocabulary: Molecular Function
TermDefinition
GO:0003917DNA topoisomerase type I activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006265DNA topological change
Vocabulary: Cellular Component
TermDefinition
GO:0005694chromosome
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