Tk05472, Tk05472 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk05472
Unique NameTk05472
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length339
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 84..146
e-value: 3.2E-22
score: 89.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 85..141
e-value: 1.2E-19
score: 69.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 82..142
score: 18.528
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 85..143
e-value: 3.96139E-22
score: 85.758
NoneNo IPR availableGENE3D1.10.10.60coord: 64..142
e-value: 9.0E-24
score: 85.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..330
NoneNo IPR availablePANTHERPTHR24208:SF105DLIM1coord: 57..165
NoneNo IPR availablePANTHERPTHR24208FAMILY NOT NAMEDcoord: 57..165
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 117..140
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 78..146

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1maker-scaffold865_size87005-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk05472 ID=Tk05472|Name=Tk05472|organism=Tigriopus kingsejongensis|type=polypeptide|length=339bp
LPTPGGHMMDPLHSPYPPLPHIKMETNNNSLSPEKALFGGGGGPDQLIKP
ELDNEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLK
TAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMV
AGRGFFPGKGGRRGFPLIGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFPV
PPGPMGYMGPGVGPHMDQPLPMHGGPMNSGPMGPPPSMTPNSGGGPDFPG
SEFPLGEMPPPNSNSSPEDDFNSSTGSANSNQNSVTPTGNGSGSNPVGGG
VLNGPNSGGNGNNNGSSNGSFSSPSHNGVGGSGDEQMVW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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