Tk10279, Tk10279 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10279
Unique NameTk10279
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length490
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 13..207
e-value: 8.0E-13
score: 50.0
coord: 223..482
e-value: 2.6E-5
score: 25.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 22..161
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 307..439
IPR019440Chromatid cohesion factor MAU2PFAMPF10345Cohesin_loadcoord: 40..484
e-value: 1.8E-68
score: 231.3
IPR019440Chromatid cohesion factor MAU2PANTHERPTHR21394UNCHARACTERIZEDcoord: 20..484
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..251
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..156
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 252..490
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 23..136
score: 8.519

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10279 ID=Tk10279|Name=Tk10279|organism=Tigriopus kingsejongensis|type=polypeptide|length=490bp
LIDGRSAASAGPLAVMSGLEPAYVALLGLSEAFLQAGQVKRSLQCLQAVL
ALSPAPNVEARTHLQLGVLLQRRTQNRDLAKHHVEQAWYQSLKLSPQDED
VLFESGSVLAQIFQEDGQFNHVKQVLGQAIDLSPSHTYWHCRLLFQLAGI
HAQDKDYVSAVTILGAGVDFAFMAGANYTRLLFMLSKTMLLLLERKYAEA
NPLLHTTGPMIENWIQQNGHQKERVAQQQKEYLQMFFLVLQVCYYLMVGQ
VKSVKTVLKQLQQSIQTITAQGWPPDEEMVSTNPADNFQWLSKDHLCILV
YLVTVMHSMQAGYMDKAQKYTDKAIAQIDKLKNVDNRPILSSFHVLLLEH
IIQCRLVTGNKGGAIQELGHLCRLLEGNHLLLQRHRAQLHTLLGLYAMSM
NQMDWAETQLNAALRTSQERELWTFANLNLAIVYLRSRRDADFVALLDRI
SPERLPSQSHSLQAAAYYIQGLQAFFAAKYNDSKLVPDVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019440MAU2
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007064mitotic sister chromatid cohesion
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