Tk11519, Tk11519 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11519
Unique NameTk11519
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length314
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 124..138
score: 38.66
coord: 254..268
score: 34.19
coord: 82..96
score: 37.77
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 56..95
e-value: 7.0E-10
score: 48.8
coord: 98..137
e-value: 2.7E-12
score: 56.9
coord: 270..311
e-value: 2.5E-4
score: 30.4
coord: 140..179
e-value: 3.2E-12
score: 56.6
coord: 225..267
e-value: 1.9E-5
score: 34.1
coord: 14..53
e-value: 6.5E-10
score: 48.9
coord: 182..222
e-value: 1.3E-6
score: 38.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 19..52
e-value: 9.0E-9
score: 35.7
coord: 141..179
e-value: 3.9E-9
score: 36.9
coord: 183..222
e-value: 1.8E-5
score: 25.3
coord: 59..94
e-value: 3.5E-8
score: 33.9
coord: 99..137
e-value: 4.4E-10
score: 39.9
coord: 226..267
e-value: 2.0E-5
score: 25.2
coord: 274..311
e-value: 0.0067
score: 17.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 63..104
score: 16.958
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 21..62
score: 15.621
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 232..276
score: 10.408
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 190..231
score: 13.917
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 147..188
score: 15.956
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 105..146
score: 18.061
NoneNo IPR availablePIRSFPIRSF002394GNBP_Bcoord: 1..313
e-value: 1.2E-90
score: 301.7
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 7..313
NoneNo IPR availableCDDcd00200WD40coord: 17..311
e-value: 6.41378E-102
score: 298.48
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..314
e-value: 9.2E-152
score: 506.3
IPR037834WD repeat-containing protein 5PANTHERPTHR22847:SF560WD REPEAT-CONTAINING PROTEIN 5coord: 7..313
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 166..180
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 254..268
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 82..96
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 124..138
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 21..314
score: 73.504
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 13..311

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11519 ID=Tk11519|Name=Tk11519|organism=Tigriopus kingsejongensis|type=polypeptide|length=314bp
MDSSGAKSGSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLVK
IWGAYDGKFEKTISGHKLGISDVAWSSDSRFVVSASDDKTLKIWELSSGK
CLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAH
SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV
KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYSGHRNEKYCIFANFSVTG
GKWIVSGSEDNMVYIWNLQTKEVVQKLLGHTDVVLCTACHPTENIIASAA
LENDKTIKLWKSDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037834WDR5
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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