Tk11817, Tk11817 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11817
Unique NameTk11817
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length325
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 266..287
score: 27.18
coord: 152..176
score: 21.17
coord: 231..253
score: 29.68
coord: 185..206
score: 33.54
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 167..306
e-value: 4.2E-31
score: 108.1
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 237..253
NoneNo IPR availableGENE3D1.20.1070.10coord: 129..319
e-value: 1.0E-48
score: 167.8
NoneNo IPR availablePANTHERPTHR24240:SF85OPSIN RH1-RELATEDcoord: 120..316
NoneNo IPR availablePANTHERPTHR24240OPSINcoord: 120..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 291..325
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 208..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..267
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 134..316
NoneNo IPR availableTMHMMTMhelixcoord: 189..211
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 268..290
NoneNo IPR availableTMHMMTMhelixcoord: 226..247
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 167..325
score: 23.501

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1maker-scaffold71_size417697-snap-gene-3.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11817 ID=Tk11817|Name=Tk11817|organism=Tigriopus kingsejongensis|type=polypeptide|length=325bp
MNLEEMRYQGMGAYLVPKLLLPLMSAKLSLMVTPSKLGPKSKSNEGTLSL
AWISCSTGTFLKQATISSWSPLSFYFALSPLNTENPTRTMAYGQASADPA
MGTISGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIP
HFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMM
TTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRY
NVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLF
TCSYDYLNQDFNHKSYQHRQSRLGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
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