EMLSAG00000000024, EMLSAG00000000024-682790 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000024
Unique Name	EMLSAG00000000024-682790
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:Q52V24 "Hepatopancreas trypsin" species:6717 "Pontastacus leptodactylus" [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0046872 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 PDB:4BNR PDBsum:4BNR EMBL:AY906961 PDB:2F91 PDBsum:2F91 IntAct:Q52V24 MEROPS:S01.035 EvolutionaryTrace:Q52V24 Uniprot:Q52V24)

HSP 1 Score: 52.373 bits (124), Expect = 2.583e-8
Identity = 35/94 (37.23%), Postives = 43/94 (45.74%), Query Frame = 0

Query:    7 MNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYD----------------------ARYGTNE---TMICAAAPR--KDSCQ 73
            ++ DI LLK      FND   P+ALPE      GDV++TGWGT  +                      A YG +E   +MICA  P   KDSCQ
Sbjct:   93 LDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186

[Close]

BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:CG31265 species:7227 "Drosophila melanogaster" [GO:0004252 "serine-type endopeptidase activity" evidence=ISS;NAS] [GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 OrthoDB:EOG7MKW6Q EMBL:AY070950 UniGene:Dm.6198 ProteinModelPortal:Q8MTU7 STRING:7227.FBpp0082843 MEROPS:S01.A97 PaxDb:Q8MTU7 PRIDE:Q8MTU7 FlyBase:FBgn0051265 InParanoid:Q8MTU7 Bgee:Q8MTU7 Uniprot:Q8MTU7)

HSP 1 Score: 42.743 bits (99), Expect = 8.412e-5
Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTN 58
            M+    M+ DI L+K      FN+  +P+ALP   ++   ++VLTGWG+  D  YG++
Sbjct:  121 MYDQPYMHNDIALVKLTENITFNELTQPIALPTRPVQLGEEIVLTGWGS--DVAYGSS 176

[Close]

BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:PRSS2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 OrthoDB:EOG75B84T TreeFam:TF331065 GeneTree:ENSGT00740000115192 Ensembl:ENSGALT00000030486 Uniprot:F1NP19)

HSP 1 Score: 40.817 bits (94), Expect = 2.096e-4
Identity = 19/66 (28.79%), Postives = 35/66 (53.03%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAP 67
            + S+ +N DI L+K  S  +++   +P+ALP +  +   + +++GWG      Y   E + C  AP
Sbjct:   33 YSSITLNNDIMLIKLASAVEYSADIQPIALPSSCAKAGTECLISGWGNTLSNGYNYPELLQCLNAP 98

[Close]

BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:Q90629 "Trypsin II-P29" species:9031 "Gallus gallus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] [GO:0007586 "digestion" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0005615 GO:GO:0046872 GO:GO:0007586 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 HOGENOM:HOG000251820 KO:K01312 CTD:5645 EMBL:U15157 PIR:S55066 RefSeq:NP_990715.1 UniGene:Gga.10164 ProteinModelPortal:Q90629 SMR:Q90629 PaxDb:Q90629 GeneID:396344 KEGG:gga:396344 InParanoid:Q90629 NextBio:20816392 PRO:PR:Q90629 Uniprot:Q90629)

HSP 1 Score: 40.0466 bits (92), Expect = 5.303e-4
Identity = 19/66 (28.79%), Postives = 35/66 (53.03%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAP 67
            + S+ +N DI L+K  S  +++   +P+ALP +  +   + +++GWG      Y   E + C  AP
Sbjct:  101 YSSITLNNDIMLIKLASAVEYSADIQPIALPSSCAKAGTECLISGWGNTLSNGYNYPELLQCLNAP 166

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592915793|gb|GAXK01042582.1| (TSA: Calanus finmarchicus comp212969_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 8.993e-4
Identity = 28/93 (30.11%), Postives = 40/93 (43.01%), Query Frame = 0

Query:    9 YDICLLKSKSREDFNDKGKPVALPENYLEF-NGDVVLTGWGTIY------------DARYGTNET---------------MICAAAPRKDSCQ 73
            +DI +L+ K R  FN    P+ LP++  E+ N    + GWGTIY            + R   N T               M+CA   +KD+CQ
Sbjct:  256 HDIAILRLKMRATFNKSIWPIGLPQSTSEYTNTRAFVLGWGTIYFGGPLSDILQEVNLRIWDNPTCKYNYEMLDRVITDNMMCAGDTKKDACQ 534

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592778098|gb|GAXK01176470.1| (TSA: Calanus finmarchicus comp3490_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 6.273e-3
Identity = 29/104 (27.88%), Postives = 44/104 (42.31%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNG--DVVLTGWGTIYD-----------------------ARYGTN-----ETMICAAAPR--KDSCQ 73
            + S  +  D CLLK K   +F +  +P+ALP +  +     +  +TGWGT+ +                       A YG +     ++MICA      KDSCQ
Sbjct:  368 YASATITNDACLLKLKESLEFTEFVQPIALPASGQDTPAGTECTVTGWGTLSEGGFGLPNVLHKVTVPVVSDEDCNASYGASGYSVADSMICAGVEEGGKDSCQ 679

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592918135|gb|GAXK01040240.1| (TSA: Calanus finmarchicus comp146195_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 6.434e-3
Identity = 25/98 (25.51%), Postives = 38/98 (38.78%), Query Frame = 0

Query:    6 GMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVV-LTGWGTIYDA-----------------------RYGTNET------MICAAAPRKDSCQ 73
            G   D  ++K  +   F+D  +P+ LP     ++ ++  +TGWG  Y                         +Y  N+       MICA  P KDSCQ
Sbjct:  382 GSTNDFAIIKLSTPVMFDDSTQPICLPNPNTNYDDNLAEVTGWGETYTVPADDLMTVNVTTMTNEECQELHDKYAPNQNAVIDSNMICAGDPGKDSCQ 675

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592753767|gb|GAXK01200646.1| (TSA: Calanus finmarchicus comp365683_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 6.582e-3
Identity = 20/50 (40.00%), Postives = 28/50 (56.00%), Query Frame = 0

Query:    3 GSLGMNYDICLLKSKSREDFNDKG--KPVALPENYLE--FNGDVVLTGWG 48
            G  G  YD  L++   R DFN     +PV LPE+  +  FN D +++GWG
Sbjct:  586 GQKGAWYDFALIELSERVDFNRHPHIRPVCLPESGEKDYFNEDAIVSGWG 735

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592778099|gb|GAXK01176469.1| (TSA: Calanus finmarchicus comp3490_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 7.913e-3
Identity = 21/76 (27.63%), Postives = 29/76 (38.16%), Query Frame = 0

Query:   23 NDKGKPVALPENYLEFNGDVVLTGWGTIYDARYG-------------------------TNETMICAAAPRKDSCQ 73
            N+   PV LPE   +  G   ++GWGT++    G                           E+M+CA    KDSCQ
Sbjct:  455 NENVAPVTLPEAMQQTEGSCTVSGWGTLHSGDSGLPSKLMKVDVPVVTDQTCKIEYPLQIAESMLCAGEHGKDSCQ 682

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592859562|gb|GAXK01098000.1| (TSA: Calanus finmarchicus comp38145_c4_seq2 transcribed RNA sequence)

HSP 1 Score: 34.2686 bits (77), Expect = 2.109e-2
Identity = 27/101 (26.73%), Postives = 39/101 (38.61%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEF-NGDVVLTGWGTI------------YDARYGTN----------------ETMICAAAPRKDSCQ 73
            + S G N D  +++      F+    P  LP++   + N    +TGWGT+             D R  +N                  MICA+ P KDSCQ
Sbjct:  426 YNSNGNNNDFAIVRLSKDVTFSKTVMPACLPDSTKNYDNVAATVTGWGTLSSGGYQPSVLYEVDLRTQSNAQCTSSATAYSSSDITSNMICASNPGKDSCQ 728

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592942310|gb|GAXK01016243.1| (TSA: Calanus finmarchicus comp4948996_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.113 bits (74), Expect = 3.687e-2
Identity = 22/87 (25.29%), Postives = 36/87 (41.38%), Query Frame = 0

Query:   10 DICLLKSKSREDFNDKGKPVALPENYLEFNGDVV-LTGWGTI-YDARYGT---------------------NETMICAAAPRKDSCQ 73
            D  +++      F++   P+ LP     ++  +  +TGWG++ Y   Y T                        MICA++P KDSCQ
Sbjct:  232 DFAIIQLSRDVKFSNTIMPICLPNPSTNYDNRITTVTGWGSLSYKGSYPTVLQEVDVKTVTNAACSNKYYITSNMICASSPGKDSCQ 492

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592843345|gb|GAXK01114199.1| (TSA: Calanus finmarchicus comp3446942_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 7.335e-2
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 0

Query:    7 MNYDICLLKSKSREDFNDKG--KPVALPENYLEF--NGDVVLTGWGTI 50
            +N D+CLLK  +   F D    +PV LP N      N + + TGWG +
Sbjct:  252 LNNDVCLLKLSTPISFPDHPLVRPVCLPPNSQTQYGNDEAIATGWGKV 395

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592767678|gb|GAXK01186890.1| (TSA: Calanus finmarchicus comp439630_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 8.934e-2
Identity = 21/49 (42.86%), Postives = 25/49 (51.02%), Query Frame = 0

Query:    8 NYDICLLKSKSREDFND--KGKPVALP----ENYLEFNGDVVLTGWGTI 50
            NYD  LLK K   DF      +P+ LP     NY +F   V  TGWGT+
Sbjct:  362 NYDFSLLKMKKTVDFTKYPHIRPICLPVDANNNYNDFVATV--TGWGTL 502

[Close]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592877485|gb|GAXK01080251.1| (TSA: Calanus finmarchicus comp392318_c0_seq8 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 2.248e-1
Identity = 14/48 (29.17%), Postives = 24/48 (50.00%), Query Frame = 0

Query:    7 MNYDICLLKSKSREDFNDKGKPVALPENYLEFNG-DVVLTGWGTIYDA 53
             N D+ L+K      F++  +PV LP     +NG +  + GWG + + 
Sbjct:  349 FNNDLALIKLNREVQFSESIRPVCLPATDRSYNGQNTTVVGWGKLREG 492

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000000024 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1005:18324:18734:-1 gene:EMLSAG00000000024 transcript:EMLSAT00000000024 description:"maker-LSalAtl2s1005-snap-gene-0.11")

HSP 1 Score: 155.606 bits (392), Expect = 1.137e-50
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAPRKDSCQ 73
            MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAPRKDSCQ
Sbjct:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAPRKDSCQ 73

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000004828 (pep:novel supercontig:LSalAtl2s:LSalAtl2s254:397245:398159:-1 gene:EMLSAG00000004828 transcript:EMLSAT00000004828 description:"augustus_masked-LSalAtl2s254-processed-gene-4.1")

HSP 1 Score: 90.5077 bits (223), Expect = 1.032e-23
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  123 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 218

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000010925 (pep:novel supercontig:LSalAtl2s:LSalAtl2s730:283497:284811:1 gene:EMLSAG00000010925 transcript:EMLSAT00000010925 description:"maker-LSalAtl2s730-augustus-gene-3.19")

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-23
Identity = 50/97 (51.55%), Postives = 57/97 (58.76%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP K SCQ
Sbjct:   94 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKXSCQ 190

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000000025 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1005:6858:7782:-1 gene:EMLSAG00000000025 transcript:EMLSAT00000000025 description:"maker-LSalAtl2s1005-augustus-gene-0.8")

HSP 1 Score: 86.2705 bits (212), Expect = 4.139e-22
Identity = 55/97 (56.70%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGTN-ETMICAAAPRKDSCQ 73
            MFGSLGMNYDICLLK KS  D N+K KPVALP+   EF GDVV++GWGTI                        DA YG+N ET ICAAAP KDSCQ
Sbjct:  122 MFGSLGMNYDICLLKLKSSLDLNEKVKPVALPKKDQEFTGDVVVSGWGTISSNGLSSPVLRSVTVQVVSDEYCSDAYYGSNDETNICAAAPGKDSCQ 218

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000000023 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1005:1582:2451:1 gene:EMLSAG00000000023 transcript:EMLSAT00000000023 description:"augustus_masked-LSalAtl2s1005-processed-gene-0.0")

HSP 1 Score: 80.8777 bits (198), Expect = 1.623e-20
Identity = 52/96 (54.17%), Postives = 58/96 (60.42%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIY-----------------------DARYG-TNETMICAAAPRKDSCQ 73
            FGS G NYD+CLLK KS  D N+K KPVALPE   EF GDVV++GWGTI                        DA +G T+ETMICAAAP KDSCQ
Sbjct:   34 FGSHGTNYDVCLLKLKSSLDLNEKVKPVALPEKDQEFTGDVVVSGWGTIXSNGPSXPVLRSVTVHVVSDEDCSDAYFGSTDETMICAAAPGKDSCQ 129

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000010924 (pep:novel supercontig:LSalAtl2s:LSalAtl2s730:259189:288108:-1 gene:EMLSAG00000010924 transcript:EMLSAT00000010924 description:"maker-LSalAtl2s730-snap-gene-2.5")

HSP 1 Score: 73.9442 bits (180), Expect = 1.522e-17
Identity = 49/97 (50.52%), Postives = 55/97 (56.70%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIY-----------------------DARYG-TNETMICAAAPRKDSCQ 73
            MF + G NYD+CLLK KS  D N+K KPVALPE   EF GD V++GWGTIY                       DA  G T+ETMICAAA  K SCQ
Sbjct:  184 MFETHGTNYDVCLLKLKSSLDLNEKVKPVALPEKDQEFTGDAVVSGWGTIYSDGPSSPLLRSVTVQIVSDEDCSDAYPGSTDETMICAAAAGKXSCQ 280

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000002836 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1638:13958:14826:-1 gene:EMLSAG00000002836 transcript:EMLSAT00000002836 description:"maker-LSalAtl2s1638-augustus-gene-0.2")

HSP 1 Score: 72.4034 bits (176), Expect = 3.388e-17
Identity = 47/96 (48.96%), Postives = 55/96 (57.29%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYG-TNETMICAAAPRKDSCQ 73
            FG+ G NYDICLLK KS    N+K KPVALPE   EF GDVV++GWGT+                        DA  G T+E+MICA +P KDSCQ
Sbjct:  108 FGTYGPNYDICLLKLKSSLALNEKVKPVALPEKDQEFTGDVVVSGWGTVEFGGSSSDVLRSVTLQLVSDEYCSDAYDGHTDESMICAGSPGKDSCQ 203

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000007886 (pep:novel supercontig:LSalAtl2s:LSalAtl2s464:52646:53754:1 gene:EMLSAG00000007886 transcript:EMLSAT00000007886 description:"maker-LSalAtl2s464-augustus-gene-0.4")

HSP 1 Score: 64.3142 bits (155), Expect = 2.447e-14
Identity = 38/96 (39.58%), Postives = 49/96 (51.04%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-------------------YDARY-----GTNETMICAAAPRKDSCQ 73
            F S G+N DICLL+ +   +FND  KPV LPE      G+VV++GWGT+                   Y   Y     G +E+MICA+   KDSCQ
Sbjct:  120 FASKGINNDICLLEVEHPFEFNDNVKPVTLPEKEFTPTGEVVVSGWGTLRANGNSSPVLRTVTLNMVPYLRCYINYIGGLDESMICASGKGKDSCQ 215

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000004826 (pep:novel supercontig:LSalAtl2s:LSalAtl2s254:382958:388781:1 gene:EMLSAG00000004826 transcript:EMLSAT00000004826 description:"maker-LSalAtl2s254-snap-gene-3.35")

HSP 1 Score: 57.7658 bits (138), Expect = 1.583e-11
Identity = 33/96 (34.38%), Postives = 47/96 (48.96%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI------------YDARY------------GTNETMICAAAPRKDSCQ 73
            + + G N DICLLK +S  +FNDK   V LP    +F G V ++GWG++             D +               +++M+CA A RKDSCQ
Sbjct:  137 YATKGTNNDICLLKLESSLEFNDKVDAVNLPRKNKKFKGKVRVSGWGSVTPGGESSDFLRSVDVKIMSFAKCNLLYLNALDKSMLCAGARRKDSCQ 232

[Close]

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000005416 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2918:1117:2218:1 gene:EMLSAG00000005416 transcript:EMLSAT00000005416 description:"maker-LSalAtl2s2918-snap-gene-0.4")

HSP 1 Score: 51.6026 bits (122), Expect = 1.070e-9
Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDAR----------------------YGT--NETMICAAAPRKDSCQ 73
            FG+ G+N DIC+L  +    FN+    +        F GD V++GWGT Y                         YG+  +++MICAAAP KDSCQ
Sbjct:   94 FGTSGVNNDICILHLEKPLKFNE----LQCLTKIXXFEGDAVISGWGTTYSGAPPSFVXRWAKVNIVSKAECQNAYGSLLDDSMICAAAPGKDSCQ 185

[Close]

BLAST of EMLSAG00000000024 vs. Select Arthropod Genomes
Match: gb|EFA05680.2| (serine protease P151 [Tribolium castaneum])

HSP 1 Score: 46.9802 bits (110), Expect = 4.374e-7
Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 0

Query:    3 GSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGT 49
            G +G N DI LLK  +  +F D  +P+ LPE   EF GD VLTGWG+
Sbjct:  117 GRVGPN-DIALLKLATPLEFGDLVQPIGLPEPGSEFTGDSVLTGWGS 162

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|31563314|gb|AAP55755.1| (trypsin 1c, partial [Lepeophtheirus salmonis])

HSP 1 Score: 92.8189 bits (229), Expect = 1.848e-21
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  120 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 216

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031226|gb|AAL71880.1| (trypsin type 6, partial [Lepeophtheirus salmonis])

HSP 1 Score: 92.4337 bits (228), Expect = 1.849e-21
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  106 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 202

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031228|gb|AAL71881.1| (trypsin type 7, partial [Lepeophtheirus salmonis])

HSP 1 Score: 92.8189 bits (229), Expect = 1.997e-21
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  119 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 215

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031224|gb|AAL71879.1| (trypsin type 5, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.065e-20
Identity = 50/97 (51.55%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALP+   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:   97 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPKKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 193

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|31563316|gb|AAP55756.1| (trypsin 1a [Lepeophtheirus salmonis] >gi|31563318|gb|AAP55757.1| trypsin 1aii [Lepeophtheirus salmonis] >gi|31563320|gb|AAP55758.1| trypsin 1aiii [Lepeophtheirus salmonis] >gi|31563324|gb|AAP55760.1| trypsin 1a [Lepeophtheirus salmonis] >gi|71534674|emb|CAH61461.1| putative trypsin [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.498e-20
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  123 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 218

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|31563322|gb|AAP55759.1| (trypsin 1b [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.521e-20
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  122 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 217

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031218|gb|AAL71876.1| (trypsin type 2, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.641e-20
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  119 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 214

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031220|gb|AAL71877.1| (trypsin type 3, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.1225 bits (222), Expect = 1.825e-20
Identity = 50/96 (52.08%), Postives = 56/96 (58.33%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  119 FASHGTNYDVCLLKLKSSLHFNKKVKPIALPEKEQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 214

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031216|gb|AAL71875.1| (trypsin type 1, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.1225 bits (222), Expect = 1.908e-20
Identity = 49/96 (51.04%), Postives = 57/96 (59.38%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        +A YG+ +ETMICAAAP KDSCQ
Sbjct:  121 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSBAYYGSIDETMICAAAPGKDSCQ 216

[Close]

BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031222|gb|AAL71878.1| (trypsin type 4, partial [Lepeophtheirus salmonis])

HSP 1 Score: 87.8113 bits (216), Expect = 1.129e-19
Identity = 49/96 (51.04%), Postives = 56/96 (58.33%), Query Frame = 0

Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K  P+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  109 FASHGTNYDVCLLKLKSSLHFNEKVNPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 204

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000024 vs. GO
BLAST of EMLSAG00000000024 vs. C. finmarchicus
BLAST of EMLSAG00000000024 vs. L. salmonis peptides
BLAST of EMLSAG00000000024 vs. SwissProt
BLAST of EMLSAG00000000024 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000024 vs. nr
BLAST of EMLSAG00000000024 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000024 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 4


Match Name	E-value	Identity	Description
-	2.583e-8	37.23	symbol:Q52V24 "Hepatopancreas trypsin" species:671...	[more]
-	8.412e-5	36.21	symbol:CG31265 species:7227 "Drosophila melanogast...	[more]
-	2.096e-4	28.79	symbol:PRSS2 "Uncharacterized protein" species:903...	[more]
-	5.303e-4	28.79	symbol:Q90629 "Trypsin II-P29" species:9031 "Gallu...	[more]

BLAST of EMLSAG00000000024 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592915793\|gb\|GAXK01042582.1\|	8.993e-4	30.11	TSA: Calanus finmarchicus comp212969_c1_seq1 trans...	[more]
gi\|592778098\|gb\|GAXK01176470.1\|	6.273e-3	27.88	TSA: Calanus finmarchicus comp3490_c3_seq1 transcr...	[more]
gi\|592918135\|gb\|GAXK01040240.1\|	6.434e-3	25.51	TSA: Calanus finmarchicus comp146195_c0_seq1 trans...	[more]
gi\|592753767\|gb\|GAXK01200646.1\|	6.582e-3	40.00	TSA: Calanus finmarchicus comp365683_c0_seq2 trans...	[more]
gi\|592778099\|gb\|GAXK01176469.1\|	7.913e-3	27.63	TSA: Calanus finmarchicus comp3490_c0_seq1 transcr...	[more]
gi\|592859562\|gb\|GAXK01098000.1\|	2.109e-2	26.73	TSA: Calanus finmarchicus comp38145_c4_seq2 transc...	[more]
gi\|592942310\|gb\|GAXK01016243.1\|	3.687e-2	25.29	TSA: Calanus finmarchicus comp4948996_c0_seq1 tran...	[more]
gi\|592843345\|gb\|GAXK01114199.1\|	7.335e-2	37.50	TSA: Calanus finmarchicus comp3446942_c0_seq1 tran...	[more]
gi\|592767678\|gb\|GAXK01186890.1\|	8.934e-2	42.86	TSA: Calanus finmarchicus comp439630_c0_seq1 trans...	[more]
gi\|592877485\|gb\|GAXK01080251.1\|	2.248e-1	29.17	TSA: Calanus finmarchicus comp392318_c0_seq8 trans...	[more]

Pages

BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 11


Match Name	E-value	Identity	Description
EMLSAP00000000024	1.137e-50	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1005:1832...	[more]
EMLSAP00000004828	1.032e-23	52.08	pep:novel supercontig:LSalAtl2s:LSalAtl2s254:39724...	[more]
EMLSAP00000010925	2.024e-23	51.55	pep:novel supercontig:LSalAtl2s:LSalAtl2s730:28349...	[more]
EMLSAP00000000025	4.139e-22	56.70	pep:novel supercontig:LSalAtl2s:LSalAtl2s1005:6858...	[more]
EMLSAP00000000023	1.623e-20	54.17	pep:novel supercontig:LSalAtl2s:LSalAtl2s1005:1582...	[more]
EMLSAP00000010924	1.522e-17	50.52	pep:novel supercontig:LSalAtl2s:LSalAtl2s730:25918...	[more]
EMLSAP00000002836	3.388e-17	48.96	pep:novel supercontig:LSalAtl2s:LSalAtl2s1638:1395...	[more]
EMLSAP00000007886	2.447e-14	39.58	pep:novel supercontig:LSalAtl2s:LSalAtl2s464:52646...	[more]
EMLSAP00000004826	1.583e-11	34.38	pep:novel supercontig:LSalAtl2s:LSalAtl2s254:38295...	[more]
EMLSAP00000005416	1.070e-9	34.38	pep:novel supercontig:LSalAtl2s:LSalAtl2s2918:1117...	[more]

Pages

BLAST of EMLSAG00000000024 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000024 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1


Match Name	E-value	Identity	Description
gb\|EFA05680.2\|	4.374e-7	51.06	serine protease P151 [Tribolium castaneum]	[more]

BLAST of EMLSAG00000000024 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|31563314\|gb\|AAP55755.1\|	1.848e-21	52.58	trypsin 1c, partial [Lepeophtheirus salmonis]	[more]
gi\|19031226\|gb\|AAL71880.1\|	1.849e-21	52.58	trypsin type 6, partial [Lepeophtheirus salmonis]	[more]
gi\|19031228\|gb\|AAL71881.1\|	1.997e-21	52.58	trypsin type 7, partial [Lepeophtheirus salmonis]	[more]
gi\|19031224\|gb\|AAL71879.1\|	1.065e-20	51.55	trypsin type 5, partial [Lepeophtheirus salmonis]	[more]
gi\|31563316\|gb\|AAP55756.1\|	1.498e-20	52.08	trypsin 1a [Lepeophtheirus salmonis] >gi\|31563318\|...	[more]
gi\|31563322\|gb\|AAP55759.1\|	1.521e-20	52.08	trypsin 1b [Lepeophtheirus salmonis]	[more]
gi\|19031218\|gb\|AAL71876.1\|	1.641e-20	52.08	trypsin type 2, partial [Lepeophtheirus salmonis]	[more]
gi\|19031220\|gb\|AAL71877.1\|	1.825e-20	52.08	trypsin type 3, partial [Lepeophtheirus salmonis]	[more]
gi\|19031216\|gb\|AAL71875.1\|	1.908e-20	51.04	trypsin type 1, partial [Lepeophtheirus salmonis]	[more]
gi\|19031222\|gb\|AAL71878.1\|	1.129e-19	51.04	trypsin type 4, partial [Lepeophtheirus salmonis]	[more]

Pages

BLAST of EMLSAG00000000024 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1005	supercontig	LSalAtl2s1005:18324..18734 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1005-snap-gene-0.11
Biotype	protein_coding
Evidence	IEA
Note	trypsin 1c, partial [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000024 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000024	EMLSAT00000000024-695871	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1005:18324..18734-

gene from alignment at LSalAtl2s1005:18324..18734-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000024-682790 ID=EMLSAG00000000024-682790|Name=EMLSAG00000000024|organism=Lepeophtheirus salmonis|type=gene|length=411bp|location=Sequence derived from alignment at LSalAtl2s1005:18324..18734- (Lepeophtheirus salmonis)
ATGTTTGGATCCCTGGGCATGAACTATGACATTTGTCTTTTGAAATCAAA
GTCCAGGGAGGACTTCAACGAGTAAAAACTAAATCATACCATTTCTTTTT
TAAATAGTTAATAACTATTGTTTATTAAGTAAAGGCAAGCCTGTTGCTCT
CCCAGAAAATTACCTAGAATTCAACGGTGATGTTGTTTTGACCGGATGGG
GAACTATCTAGTACAGTGGCCCACCTTTTCCAGTCTTTAGGTCAGTTACT
TTCCATGTTGTTTCTGATGATGGAGACAATAAAAATAATATTTATACCTT
GAAAAGAAATTTACATCTATAAATTATATTAAAATAGACTGAAGCGATGC
CCGCTATGGTACTAATGAGACTATGATATGTGCTGCTGCTCCCCGAAAGG
ACTCCTGCCAA

Add to Basket

Pages

Pages

Pages

Search form