EMLSAG00000000047, EMLSAG00000000047-682813 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000047 vs. C. finmarchicus
Match: gi|592767768|gb|GAXK01186800.1| (TSA: Calanus finmarchicus comp1505433_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 2.574e+0 Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 0 Query: 6 LLSKIESSGLQPLAEDTKIPTEKLMDILFWIWTSY---KLKNEGMSNSSYWY 54 L+SKI SSG+QP+ P +++D + W W + KL E + N S ++ Sbjct: 220 LISKIRSSGIQPM------PDVEVLDYI-WDWKLFVLDKLTKEELRNHSNYH 354
BLAST of EMLSAG00000000047 vs. C. finmarchicus
Match: gi|592954961|gb|GAXK01003592.1| (TSA: Calanus finmarchicus comp4366811_c0_seq1 transcribed RNA sequence) HSP 1 Score: 26.9498 bits (58), Expect = 4.597e+0 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 0 Query: 36 IWTSYKLKNEGMSNSSYWY 54 IW S+KL +G+ S+WY Sbjct: 183 IWISFKLSKQGLHQPSHWY 239
BLAST of EMLSAG00000000047 vs. L. salmonis peptides
Match: EMLSAP00000000047 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1009:28271:28546:-1 gene:EMLSAG00000000047 transcript:EMLSAT00000000047 description:"maker-LSalAtl2s1009-augustus-gene-0.22") HSP 1 Score: 136.732 bits (343), Expect = 1.892e-43 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 Query: 1 MESSYLLSKIESSGLQPLAEDTKIPTEKLMDILFWIWTSYKLKNEGMSNSSYWYYGAKLNSSGANATA 68 MESSYLLSKIESSGLQPLAEDTKIPTEKLMDILFWIWTSYKLKNEGMSNSSYWYYGAKLNSSGANATA Sbjct: 1 MESSYLLSKIESSGLQPLAEDTKIPTEKLMDILFWIWTSYKLKNEGMSNSSYWYYGAKLNSSGANATA 68 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000047 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000047 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000000047 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000047 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000047 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000047 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000047 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1009:28271..28546- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000047-682813 ID=EMLSAG00000000047-682813|Name=EMLSAG00000000047|organism=Lepeophtheirus salmonis|type=gene|length=276bp|location=Sequence derived from alignment at LSalAtl2s1009:28271..28546- (Lepeophtheirus salmonis)back to top Add to Basket
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