EMLSAG00000003777, EMLSAG00000003777-686543 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003777
Unique NameEMLSAG00000003777-686543
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003777 vs. L. salmonis peptides
Match: EMLSAP00000003777 (pep:novel supercontig:LSalAtl2s:LSalAtl2s204:229964:232187:1 gene:EMLSAG00000003777 transcript:EMLSAT00000003777 description:"maker-LSalAtl2s204-snap-gene-2.12")

HSP 1 Score: 125.561 bits (314), Expect = 2.463e-39
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 
Query:    1 MSPSNTTLTSSIQANQSHTYVNDIDMKRQIVVDMSSRGMMVTEIPKLWDELKGNISNQKRI 61
            MSPSNTTLTSSIQANQSHTYVNDIDMKRQIVVDMSSRGMMVTEIPKLWDELKGNISNQKRI
Sbjct:    1 MSPSNTTLTSSIQANQSHTYVNDIDMKRQIVVDMSSRGMMVTEIPKLWDELKGNISNQKRI 61
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003777 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003777 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003777 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000037772.463e-39100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s204:22996... [more]
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BLAST of EMLSAG00000003777 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003777 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003777 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003777 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s204supercontigLSalAtl2s204:229964..232187 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s204-snap-gene-2.12
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003777 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003777EMLSAT00000003777-699624Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s204:229964..232187+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003777-686543 ID=EMLSAG00000003777-686543|Name=EMLSAG00000003777|organism=Lepeophtheirus salmonis|type=gene|length=2224bp|location=Sequence derived from alignment at LSalAtl2s204:229964..232187+ (Lepeophtheirus salmonis)
ATGTCTCCCTCAAATACAACACTTACTAGCAGTATACAGGCCAATCAAAG
TCATACATACGTTAGTAAGAGGACAGTACCCACAAAAAACTATGCTGCTG
CTAAAGAGAAATGTCAGTTATTACTTAGATAATGATGTTTCCAGTATTCA
ATGGACCATCATCGTTTTCCCATTTTCTTCTGTTCTTTATCTCTGCCTAT
CTTTCTTTCCTTCTCTCTTTCAATCACGTGTGAAATAACGTAAGTTTATA
ATATTTAGAGTAACGCAACCTCCAACTGCTTAACAAACATATTAAGATAT
AATTTATAAATAGGTAGGTATTAATCAATCCTAATTGAAAAGTGGGGTCA
AGGCCGTTGTGACGGAAGCGTATGACACCCCCTATCCCCCTTGGAATATT
AGAGTGAAAAAAAGTAGGATTTTTGAACGACTTTAAGAAACTAGATAAAT
GACTTTTCTACAAATTAAAATGTCAGCTTCTAAAAATAAGTCATTAAAGG
GATAATAAAAAAACGTTATTGAATTGAAAATGAACAAACTATTTCACCTA
AAAACTATTATTTTTTTGGGGAAAATTAATAAGTCCCAATCTTATTTTCA
AAGAAAGTCACCTTATATGAGTGTTTGAAAAAAAAAATCAATGTTAGTGG
GAAAATTTGAAAATGATAATAATAAAAATCCTAACGGGGGCTTGGTTCAG
ATTCTCTCTTTCTGGTGTTTCATCATTATTTTTTTATGTAAAAATCATAT
AAATTTAAAAAAAAAAATCGTATAAAATTGTCTATCTGTTGGAAATCTAA
ATATGGTAAATTAATATATTGCTTAAAAGTAATTTATAATAATGATAAAC
TAATTGATTAAATGATTCCATGCATACCTTATAATATGATCAATTCTTAT
ATTAAACATAGTATCTCTTTTTAATATCAGAAAATATGTAGTAATGAAGA
AGAGTTAAATTATGGATGCATAGAATTTATTTTGTAAAATATTTACTAAT
AAAATTGTACCATTAATTGTATCTGAGGTTATTGATAAGAACTGTTACTA
TCAAACATAATTAAATTATTTATGATTGAATAACAAAAAAAATGATTAAT
TGCAGACAGTGTTAACAAGGTTGCGTGATTTATAACGCTGAACGTATATT
TGTTTACTTTTCACTTTAAATAAATTTCTCTAGACGACATAGATATGAAA
CGTCAAATTGTGGTCGACATGTCATCGCGGGGAATGATGGTAACTGAGAT
CCCAAAGCTGTGGGATGAGCTGAAAGGCAATATATCTAATCAGAAAAGGA
TTTGAGGAGCGTGGGACAGTCCAAAGACTAATCAAAGTCAAAGCTAATGT
CAAGTGAAATCCAATCAGGACCTCCTGTACAGGTCCATAGGATCGTTTAT
GAGGACCTGGGGATGATGGGCCAGAGGAAAGTAGCACCTCATCGATGAGT
CAACAAAAGCAAAATGGCTCSCGAGATCAATATTACTCCACAWGCTCAAG
GTTGGAACGCCAACAATTTTGTGTTCTGAGGAAAAACATTTTAGGGTGGA
TTGGGTATCAAACATAAGTAATAAAACGCTTATTATATTTAAGACCAAAC
ATTCGGCTTCTGTAATAATCCTAGGTGTTGTASCTTCCAATAGCAAAAAA
CGTCCTCGATTTTTATCTGCAACAAAGAAAAAATCAATACAGTCCATTAC
ATCAATCTCTTAAGAGACACGTGTCAAGCCCTGGATTGAGGTGGTGTTTG
GAGATGAGACATATATCTTCCATCTGGATTATTCTCCATGCCACAGAGCC
CAAAAAAAAAAGCCAAGATTGGCTCTCCAAAAATATGACCTCATTTTGGT
TCAAGGACATGTGGGCTCCCAGCTACCCCACCTGAACCCATTGTACTACA
ACATTTAGGGTAAGCTTGAGAGAGTTGCCTGCAACAAATCACATGGCTCA
ACACCATCCCTGGAGGCATCCATCATATAAACCTGGAATGCAATGTCAGA
AGACTATATCATTAAGGCGTGCCAAAACATCAGAAGGAGGTTGGAGGTTA
TCATTAAGCTGAAAATTGCCATCTTGAATAATCCAATCATTTAAGTCATG
TAACAACTTTGGAAAAAATAAAATAAAATTATTTCTTACATTTATATTTT
TGACAATAGTTCCGGTGAAAAGTATATCATTAATAATAAGTGTTACCCTT
TTTTTGGAACATGGAGTAGATAAT
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