EMLSAG00000004667, EMLSAG00000004667-687433 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000004667
Unique Name	EMLSAG00000004667-687433
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:Rps3a "40S ribosomal protein S3a" species:10116 "Rattus norvegicus" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0031369 "translation initiation factor binding" evidence=IPI] [GO:0043066 "negative regulation of apoptotic process" evidence=ISS] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 RGD:62078 GO:GO:0005634 GO:GO:0043066 GO:GO:0030154 GO:GO:0003735 GO:GO:0002181 GO:GO:0022627 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK GeneTree:ENSGT00390000018433 CTD:6189 HOVERGEN:HBG000783 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:M84716 EMBL:X75161 EMBL:BC058483 PIR:JC5250 RefSeq:NP_058849.1 UniGene:Rn.94935 BioGrid:247958 IntAct:P49242 MINT:MINT-4569153 PhosphoSite:P49242 PaxDb:P49242 PRIDE:P49242 Ensembl:ENSRNOT00000016329 GeneID:29288 KEGG:rno:29288 UCSC:RGD:62078 InParanoid:P49242 NextBio:608681 PRO:PR:P49242 Genevestigator:P49242 Uniprot:P49242)

HSP 1 Score: 81.6481 bits (200), Expect = 1.404e-18
Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKR 83
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  + G SGK T   TG  ++R
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 252

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BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:Rps3a "ribosomal protein S3a" species:10116 "Rattus norvegicus" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003674 "molecular_function" evidence=ND] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006412 "translation" evidence=ISO;ISS] [GO:0008150 "biological_process" evidence=ND] [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO;IDA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0031369 "translation initiation factor binding" evidence=IPI] [GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 RGD:62078 GO:GO:0005634 GO:GO:0043066 GO:GO:0030154 GO:GO:0003735 GO:GO:0002181 GO:GO:0022627 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK GeneTree:ENSGT00390000018433 CTD:6189 HOVERGEN:HBG000783 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:M84716 EMBL:X75161 EMBL:BC058483 PIR:JC5250 RefSeq:NP_058849.1 UniGene:Rn.94935 BioGrid:247958 IntAct:P49242 MINT:MINT-4569153 PhosphoSite:P49242 PaxDb:P49242 PRIDE:P49242 Ensembl:ENSRNOT00000016329 GeneID:29288 KEGG:rno:29288 UCSC:RGD:62078 InParanoid:P49242 NextBio:608681 PRO:PR:P49242 Genevestigator:P49242 Uniprot:P49242)

HSP 1 Score: 81.6481 bits (200), Expect = 1.404e-18
Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKR 83
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  + G SGK T   TG  ++R
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 252

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BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:RPS3A "Ribosomal protein S3A, isoform CRA_e" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR001593 Pfam:PF01015 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH471056 HOGENOM:HOG000105220 EMBL:AC095055 UniGene:Hs.356572 HGNC:HGNC:10421 ProteinModelPortal:D6R9B6 SMR:D6R9B6 PRIDE:D6R9B6 Ensembl:ENST00000509736 NextBio:35492898 ArrayExpress:D6R9B6 Uniprot:D6R9B6)

HSP 1 Score: 78.1814 bits (191), Expect = 7.301e-18
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:   49 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 134

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BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:Rps3a1 "ribosomal protein S3A1" species:10090 "Mus musculus" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0031369 "translation initiation factor binding" evidence=ISO] [GO:0043066 "negative regulation of apoptotic process" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 MGI:MGI:1202063 GO:GO:0005829 GO:GO:0005634 GO:GO:0043066 GO:GO:0030154 GO:GO:0003735 GO:GO:0030529 GO:GO:0002181 GO:GO:0022627 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK HOVERGEN:HBG000783 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:Z83368 EMBL:AK088113 EMBL:BC039659 EMBL:BC081451 EMBL:BC083338 EMBL:BC084675 RefSeq:NP_058655.3 UniGene:Mm.399829 ProteinModelPortal:P97351 SMR:P97351 BioGrid:203010 IntAct:P97351 MINT:MINT-1859558 PhosphoSite:P97351 PaxDb:P97351 PRIDE:P97351 Ensembl:ENSMUST00000029722 GeneID:20091 KEGG:mmu:20091 UCSC:uc008prc.2 CTD:20091 InParanoid:P97351 NextBio:297595 PRO:PR:P97351 Bgee:P97351 CleanEx:MM_RPS3A Genevestigator:P97351 Uniprot:P97351)

HSP 1 Score: 79.337 bits (194), Expect = 8.532e-18
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  + G SGK     TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR027500 Pfam:PF01015 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC095055 HGNC:HGNC:10421 ProteinModelPortal:H0Y9Y4 PRIDE:H0Y9Y4 Ensembl:ENST00000515792 NextBio:35520875 ArrayExpress:H0Y9Y4 Bgee:H0Y9Y4 Uniprot:H0Y9Y4)

HSP 1 Score: 78.1814 bits (191), Expect = 1.575e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  112 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 197

[Close]

BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0005634 GO:GO:0030154 GO:GO:0006412 GO:GO:0003735 GO:GO:0022627 HOGENOM:HOG000105220 EMBL:AC095055 HGNC:HGNC:10421 ProteinModelPortal:D6RAT0 SMR:D6RAT0 PRIDE:D6RAT0 Ensembl:ENST00000506126 Ensembl:ENST00000514682 NextBio:35493351 ArrayExpress:D6RAT0 Uniprot:D6RAT0)

HSP 1 Score: 78.1814 bits (191), Expect = 1.865e-17
Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKR 83
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R
Sbjct:  131 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 215

[Close]

BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9823 "Sus scrofa" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0043066 "negative regulation of apoptotic process" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0030154 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0097194 GO:GO:0022627 OMA:GQNAYTK GeneTree:ENSGT00390000018433 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:FP016091 ProteinModelPortal:F2Z5C7 SMR:F2Z5C7 PRIDE:F2Z5C7 Ensembl:ENSSSCT00000009878 ArrayExpress:F2Z5C7 Uniprot:F2Z5C7)

HSP 1 Score: 78.1814 bits (191), Expect = 2.185e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9606 "Homo sapiens" [GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=ISS;TAS] [GO:0006412 "translation" evidence=IC;IMP;NAS;TAS] [GO:0006413 "translational initiation" evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS] [GO:0006415 "translational termination" evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral process" evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019058 "viral life cycle" evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0043066 "negative regulation of apoptotic process" evidence=IMP] [GO:0044267 "cellular protein metabolic process" evidence=TAS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015 HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0070062 Reactome:REACT_116125 GO:GO:0043066 GO:GO:0030154 GO:GO:0005730 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 EMBL:CH471056 GO:GO:0002181 GO:GO:0006415 GO:GO:0006414 PDB:3J3A PDBsum:3J3A GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083 eggNOG:COG1890 HOGENOM:HOG000105220 KO:K02984 OMA:GQNAYTK CTD:6189 HOVERGEN:HBG000783 OrthoDB:EOG7Q5HDW TreeFam:TF300037 NextBio:24033 EMBL:M77234 EMBL:M84711 EMBL:L13802 EMBL:X87373 EMBL:AC095055 EMBL:AK311788 EMBL:BC000204 EMBL:BC001708 EMBL:BC004981 EMBL:BC006298 EMBL:BC009219 EMBL:BC009404 EMBL:BC017123 EMBL:BC019072 EMBL:BC030161 EMBL:BC070211 EMBL:BC071916 EMBL:AB007148 PIR:JC4662 RefSeq:NP_000997.1 UniGene:Hs.356572 ProteinModelPortal:P61247 SMR:P61247 BioGrid:112103 DIP:DIP-29408N IntAct:P61247 MINT:MINT-1160853 STRING:9606.ENSP00000346050 PhosphoSite:P61247 DMDM:47117764 SWISS-2DPAGE:P61247 PaxDb:P61247 PRIDE:P61247 DNASU:6189 Ensembl:ENST00000274065 GeneID:6189 KEGG:hsa:6189 UCSC:uc003ilz.4 GeneCards:GC04P152020 HGNC:HGNC:10421 HPA:HPA047100 HPA:HPA053454 MIM:180478 neXtProt:NX_P61247 PharmGKB:PA34830 InParanoid:P61247 PhylomeDB:P61247 GeneWiki:RPS3A GenomeRNAi:6189 PMAP-CutDB:P61247 PRO:PR:P61247 ArrayExpress:P61247 Bgee:P61247 CleanEx:HS_RPS3A Genevestigator:P61247 Uniprot:P61247)

HSP 1 Score: 78.1814 bits (191), Expect = 2.185e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9615 "Canis lupus familiaris" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR027500 Pfam:PF01015 GO:GO:0005634 GO:GO:0030154 GO:GO:0006412 GO:GO:0003735 GO:GO:0022627 GeneTree:ENSGT00390000018433 OMA:ITKDISH OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:AAEX03015121 Ensembl:ENSCAFT00000037842 Uniprot:J9P1R9)

HSP 1 Score: 78.1814 bits (191), Expect = 2.185e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. GO
Match: - (symbol:RPS3A "40S ribosomal protein S3a" species:9615 "Canis lupus familiaris" [GO:0002181 "cytoplasmic translation" evidence=IBA] [GO:0003735 "structural constituent of ribosome" evidence=IBA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0043066 "negative regulation of apoptotic process" evidence=IEA] HAMAP:MF_03122 InterPro:IPR001593 InterPro:IPR018281 InterPro:IPR027500 Pfam:PF01015 PROSITE:PS01191 GO:GO:0005829 GO:GO:0030154 GO:GO:0005730 GO:GO:0003735 GO:GO:0002181 GO:GO:0097194 GO:GO:0022627 KO:K02984 OMA:GQNAYTK GeneTree:ENSGT00390000018433 OrthoDB:EOG7Q5HDW TreeFam:TF300037 EMBL:AAEX03010036 RefSeq:XP_005629388.1 UniGene:Cfa.3544 ProteinModelPortal:F2Z4Q5 SMR:F2Z4Q5 PRIDE:F2Z4Q5 Ensembl:ENSCAFT00000012780 GeneID:403677 NextBio:20817182 Uniprot:F2Z4Q5)

HSP 1 Score: 78.1814 bits (191), Expect = 2.185e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592788617|gb|GAXK01165951.1| (TSA: Calanus finmarchicus comp17_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 72.7886 bits (177), Expect = 1.016e-15
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGK---NTDSNTGHTIKR 83
            M+DI+ RE+   DLK+V NKLIP SIA D++KA + I PLH V+IR+V ++  P   L KL+ +    SGK   +TD  TG  ++R
Sbjct:  151 MVDIIQREVSSTDLKDVVNKLIPDSIARDIEKACQGIYPLHDVHIRKVKVMRRPRFDLTKLMDMHGEGSGKTTASTDPTTGEVVER 408

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592773881|gb|GAXK01180687.1| (TSA: Calanus finmarchicus comp3683991_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 61.2326 bits (147), Expect = 4.551e-12
Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTDSNTGHTIKRTRSXI 88
            M DIM RE   CDLKE+ NK IP +I   ++K  + I PL  V IR+V +++ P     KL+ I    +      +TG  + R  S I
Sbjct:  195 MTDIMTREGTTCDLKELVNKFIPNTIGKQIEKECQGIYPLRDVLIRKVKILKAPKFDALKLMEIHTATTPAGGAKDTGAKVDRPASSI 458

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592882929|gb|GAXK01075446.1| (TSA: Calanus finmarchicus comp4774994_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 58.151 bits (139), Expect = 3.350e-11
Identity = 29/76 (38.16%), Postives = 41/76 (53.95%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTDSN 76
            M+DIM +E+   +L +   K IP  I  D+QKA   I PL  V+IR+V +++ P     KL  I  G SG  T + 
Sbjct:   10 MVDIMTKEVSSVELIKAVEKFIPEYIGKDIQKACEGIYPLQNVFIRKVKILKAPKFDAVKLAEIHAGDSGAETGAK 237

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592918886|gb|GAXK01039489.1| (TSA: Calanus finmarchicus comp6341404_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 56.225 bits (134), Expect = 2.907e-10
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLI--PASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTDS 75
            M DIM  E   CDLKE+  K I  P SI ++++KA ++I PL  V IR+V ++ +P   L KL+ +  G S ++T +
Sbjct:   30 MFDIMTEEASKCDLKELVQKFISMPESIGLEIEKACQSIFPLQNVCIRKVKILRKPKFDLLKLMELH-GDSAEDTGA 257

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592755820|gb|GAXK01198593.1| (TSA: Calanus finmarchicus comp3328088_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 55.0694 bits (131), Expect = 2.447e-9
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI 64
            MI+IM  E    DLKE+  KLIP SI  ++ K   AI PL   ++R+V ++E P   L K + +
Sbjct:  524 MIEIMTEEAQKGDLKELVKKLIPGSIGQEMGKKCSAIFPLQNTFVRKVKVVERPKFDLTKFMEL 715

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592889748|gb|GAXK01068627.1| (TSA: Calanus finmarchicus comp7727509_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.0618 bits (118), Expect = 5.144e-8
Identity = 19/62 (30.65%), Postives = 40/62 (64.52%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLV 62
            M+D++ +E+   D+KE+  KL+  SIA ++ K+  +  P+  V++R+V +++ P   L +L+
Sbjct:  191 MVDVLTKEVSKGDMKELFEKLVAGSIAEEITKSVESTFPMQNVFLRKVKIVKAPKFDLPRLM 376

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592803197|gb|GAXK01151371.1| (TSA: Calanus finmarchicus comp3879578_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.447 bits (119), Expect = 5.626e-8
Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEP 54
            M DIM +E    DLKE+  K IP SI   +++A + + PL  VYIR+V  ++ P
Sbjct:    3 MTDIMTKEATTVDLKELVRKFIPNSIGTQIEQACQCLYPLKDVYIRKVKTLKAP 164

[Close]

BLAST of EMLSAG00000004667 vs. C. finmarchicus
Match: gi|592834191|gb|GAXK01123353.1| (TSA: Calanus finmarchicus comp6562015_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 2.200e+0
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKAS 34
            M +IM  E     L+E+  KLIP SI  ++QK +
Sbjct:    1 MTEIMTAEAGKVQLRELVKKLIPESIGKEIQKQT 102

[Close]

BLAST of EMLSAG00000004667 vs. L. salmonis peptides
Match: EMLSAP00000004667 (pep:novel supercontig:LSalAtl2s:LSalAtl2s242:441032:441325:-1 gene:EMLSAG00000004667 transcript:EMLSAT00000004667 description:"augustus-LSalAtl2s242-processed-gene-4.0")

HSP 1 Score: 196.438 bits (498), Expect = 5.336e-66
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTDSNTGHTIKRTRSXIHNIKFPETS 97
            MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTDSNTGHTIKRTRSXIHNIKFPETS
Sbjct:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTDSNTGHTIKRTRSXIHNIKFPETS 97

[Close]

BLAST of EMLSAG00000004667 vs. L. salmonis peptides
Match: EMLSAP00000010230 (pep:novel supercontig:LSalAtl2s:LSalAtl2s679:420934:422457:-1 gene:EMLSAG00000010230 transcript:EMLSAT00000010230 description:"maker-LSalAtl2s679-augustus-gene-3.19")

HSP 1 Score: 93.9745 bits (232), Expect = 1.591e-24
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGK--NTDSNTGHTIKR 83
            M+DIM REI  CDLKEV  KLIP S+A D QKA R I PLH VYIR+V ++++P   LNKL+ +    SGK   TD NTG TI+R
Sbjct:  169 MVDIMTREISSCDLKEVVKKLIPDSMAXDXQKACRGIYPLHDVYIRKVKVLKKPRFDLNKLMDLHGEGSGKTTTTDPNTGETIER 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|1350987|sp|P49242.2|RS3A_RAT (RecName: Full=40S ribosomal protein S3a; AltName: Full=V-fos transformation effector protein; Contains: RecName: Full=40S ribosomal protein S3b)

HSP 1 Score: 81.6481 bits (200), Expect = 3.834e-19
Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKR 83
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  + G SGK T   TG  ++R
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 252

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|82219689|sp|Q98TX2.3|RS3A_OPHHA (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 80.8777 bits (198), Expect = 8.686e-19
Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH VY+R+V ++++P   L KL+ +  + G SGK +   TG  ++R 
Sbjct:  168 MVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|3122836|sp|P97351.3|RS3A_MOUSE (RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein TU-11)

HSP 1 Score: 79.337 bits (194), Expect = 2.636e-18
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  + G SGK     TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|82198055|sp|Q642T2.3|RS3A_XENTR (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 78.9518 bits (193), Expect = 4.540e-18
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH VY+R+V ++++P   L KL+ +  + G +GK     TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|82210070|sp|Q801S3.3|RS3AA_XENLA (RecName: Full=40S ribosomal protein S3a-A)

HSP 1 Score: 78.5666 bits (192), Expect = 6.148e-18
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M +IM RE+   DLKEV NKLIP SI  D++KA ++I PLH VY+R+V ++++P   L KL+ +  + G +GK     TG  ++R 
Sbjct:  168 MFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|47117764|sp|P61247.2|RS3A_HUMAN (RecName: Full=40S ribosomal protein S3a; AltName: Full=v-fos transformation effector protein; Short=Fte-1 >gi|75060390|sp|Q56JV9.3|RS3A_BOVIN RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 78.1814 bits (191), Expect = 7.192e-18
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|75075866|sp|Q4R4Z6.3|RS3A_MACFA (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 78.1814 bits (191), Expect = 7.498e-18
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|47117870|sp|P61246.1|RS3A_FELCA (RecName: Full=40S ribosomal protein S3a)

HSP 1 Score: 78.1814 bits (191), Expect = 7.722e-18
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  164 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 249

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|82200468|sp|Q6DV02.3|RS3A_GECJA (RecName: Full=40S ribosomal protein S3a [Gekko japonicus])

HSP 1 Score: 77.7962 bits (190), Expect = 1.081e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. SwissProt
Match: gi|269969552|sp|A8E604.1|RS3AB_XENLA (RecName: Full=40S ribosomal protein S3a-B)

HSP 1 Score: 77.411 bits (189), Expect = 1.494e-17
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH VY R+V ++++P   L KL+ +  + G SGK     TG  ++R 
Sbjct:  168 MMEIMSREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYARKVKMLKKPKFELGKLMELHGEGGGSGKPAADETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: gb|EFA05373.1| (40S ribosomal protein S3a-like Protein [Tribolium castaneum])

HSP 1 Score: 68.5514 bits (166), Expect = 1.575e-14
Identity = 32/64 (50.00%), Postives = 48/64 (75.00%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI 64
            M++I+ R+I   DLKEV NKL+P SIA D++KA + I PLH VYIR+V ++++P   L+KL+ +
Sbjct:  171 MVEIITRDITGSDLKEVVNKLLPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLEL 234

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: EAA08803.3 (AGAP003532-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 64.6994 bits (156), Expect = 4.819e-13
Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTDSNTG 78
            M  I+ REI   DLK V  KL+P SIA D++KA + + PLH VYIR+V ++++P   L+ L+ +     GK  + +TG
Sbjct:  171 MTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTG 248

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: XP_006565264.1 (PREDICTED: 40S ribosomal protein S3a [Apis mellifera])

HSP 1 Score: 62.7734 bits (151), Expect = 2.038e-12
Identity = 30/85 (35.29%), Postives = 53/85 (62.35%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTD--SNTGHTIKR 83
            M+D +  ++   DLK V +KL+P + A D++KAS+ I PLH VYIR+V ++++P   L+KL+ +    +G  ++    +G  + R
Sbjct:  171 MVDTITNDVTKSDLKGVVSKLLPDATAKDIEKASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGAGSKSEEVGESGSKVDR 255

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: EFX89527.1 (hypothetical protein DAPPUDRAFT_303071 [Daphnia pulex])

HSP 1 Score: 62.3882 bits (150), Expect = 3.357e-12
Identity = 29/64 (45.31%), Postives = 46/64 (71.88%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI 64
            M+DI+ RE+   DLKEV +KLIP SI+ D++K+ + I PLH V IR+V ++++P   + KL+ +
Sbjct:  171 MVDIITREVGSVDLKEVVSKLIPDSISKDIEKSCQGIYPLHDVNIRKVKVLKKPKFDIGKLLEL 234

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: AAN06541.1 (ribosomal protein S3A, isoform B [Drosophila melanogaster])

HSP 1 Score: 59.6918 bits (143), Expect = 1.982e-11
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTD---SNTGHTIKR 83
            M DI+  E+   DLK++ NKL   SIA D++K+ + I PLH VYIR+V ++++P   ++KL+ +     GK+ +   S+ G  I R
Sbjct:  121 MTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDR 206

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: AFH06764.1 (ribosomal protein S3A, isoform F [Drosophila melanogaster])

HSP 1 Score: 59.6918 bits (143), Expect = 2.650e-11
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTD---SNTGHTIKR 83
            M DI+  E+   DLK++ NKL   SIA D++K+ + I PLH VYIR+V ++++P   ++KL+ +     GK+ +   S+ G  I R
Sbjct:  171 MTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDR 256

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: AAF59372.1 (ribosomal protein S3A, isoform A [Drosophila melanogaster])

HSP 1 Score: 59.6918 bits (143), Expect = 2.650e-11
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTD---SNTGHTIKR 83
            M DI+  E+   DLK++ NKL   SIA D++K+ + I PLH VYIR+V ++++P   ++KL+ +     GK+ +   S+ G  I R
Sbjct:  171 MTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDR 256

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: gb|KPM08157.1| (40S ribosomal protein S3a-like protein [Sarcoptes scabiei])

HSP 1 Score: 58.151 bits (139), Expect = 1.163e-10
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQ-RGRSGKNTDSNT 77
            M++I+   I   DLK V  KLIP SIA D++KA  +I PLH V IR+V ++++P   L+KL+ +   G+   + D  T
Sbjct:  168 MVEIVTNNIQSVDLKGVVLKLIPDSIAKDIEKACNSIYPLHDVMIRKVKVLKKPKFDLSKLLEMHGEGKGSSSADPKT 245

[Close]

BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Match: EEB15398.1 (40S ribosomal protein S3A, putative [Pediculus humanus corporis])

HSP 1 Score: 57.7658 bits (138), Expect = 1.335e-10
Identity = 30/74 (40.54%), Postives = 49/74 (66.22%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKNTD 74
            M +I+ +E+   DLK+V  KL+P SIA +++K  + I PLH VYIR+V ++++P   L+KL+ +  G S   +D
Sbjct:  171 MTEIITKEVTDSDLKDVVQKLLPDSIAKEIEKYCQKIYPLHDVYIRKVKVLKKPRFDLSKLLELH-GDSKAASD 243

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|225713754|gb|ACO12723.1| (40S ribosomal protein S3a [Lepeophtheirus salmonis] >gi|290462159|gb|ADD24127.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis] >gi|290562139|gb|ADD38466.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis])

HSP 1 Score: 97.4413 bits (241), Expect = 8.989e-23
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGK--NTDSNTGHTIKR 83
            M+DIM REI  CDLKEV  KLIP S+AVDVQKA R I PLH VYIR+V ++++P   LNKL+ +    SGK   TD NTG TI+R
Sbjct:  169 MVDIMTREISSCDLKEVVKKLIPDSMAVDVQKACRGIYPLHDVYIRKVKVLKKPRFDLNKLMDLHGEGSGKTTTTDPNTGETIER 253

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|852809528|ref|XP_012892708.1| (PREDICTED: 40S ribosomal protein S3a-like, partial [Dipodomys ordii])

HSP 1 Score: 81.2629 bits (199), Expect = 1.068e-17
Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  + G SGK T   TG  ++R 
Sbjct:   49 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKATGDETGAKVERA 134

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|795226062|ref|XP_011850963.1| (PREDICTED: 40S ribosomal protein S3a-like isoform X1 [Mandrillus leucophaeus])

HSP 1 Score: 83.9593 bits (206), Expect = 1.289e-17
Identity = 39/85 (45.88%), Postives = 59/85 (69.41%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKR 83
            M++IM RE+   DLKEV NKLIP SI  D++KA ++ICPLH V++R+V ++++P + L KL+ +  +   SGK T   TG  ++R
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSICPLHDVFVRKVKMLKKPKVELGKLMELHGEGSSSGKATGDETGAKVER 252

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|432093075|gb|ELK25365.1| (40S ribosomal protein S3a [Myotis davidii])

HSP 1 Score: 78.9518 bits (193), Expect = 3.460e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:    1 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 86

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|45269041|gb|AAS55933.1| (40S ribosomal protein S3a, partial [Sus scrofa])

HSP 1 Score: 78.9518 bits (193), Expect = 4.536e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:   10 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 95

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|211907083|gb|ACJ12076.1| (ribosomal protein S3a, partial [Bombina orientalis])

HSP 1 Score: 80.1073 bits (196), Expect = 6.089e-17
Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH VY+R+V ++++P   L KL+ +  + G +GK T   TG  ++R 
Sbjct:   77 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPTGDETGAKVERA 162

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|149048221|gb|EDM00797.1| (rCG62728, isoform CRA_b [Rattus norvegicus])

HSP 1 Score: 81.6481 bits (200), Expect = 6.234e-17
Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKR 83
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  + G SGK T   TG  ++R
Sbjct:  145 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 229

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|119597984|gb|EAW77578.1| (hCG33299, isoform CRA_b [Homo sapiens])

HSP 1 Score: 80.1073 bits (196), Expect = 6.465e-17
Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IMIRE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ +  +   SGK T   TG  ++R 
Sbjct:   71 MMEIMIREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 156

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|585654026|ref|XP_006884543.1| (PREDICTED: 40S ribosomal protein S3a-like [Elephantulus edwardii])

HSP 1 Score: 82.0333 bits (201), Expect = 7.143e-17
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP SI  D++KA ++I PLH V++R+V ++++P   L KL+ I  + G SGK T   TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEIHGEGGSSGKATGDETGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. nr
Match: gi|1072269917|ref|XP_018420651.1| (PREDICTED: 40S ribosomal protein S3a [Nanorana parkeri])

HSP 1 Score: 82.0333 bits (201), Expect = 7.528e-17
Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYI--QRGRSGKNTDSNTGHTIKRT 84
            M++IM RE+   DLKEV NKLIP S+  D++KA ++I PLH VY+R+V ++++P   L KL+ +  + G SGK T  +TG  ++R 
Sbjct:  168 MMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGTSGKPTGDDTGAKVERA 253

[Close]

BLAST of EMLSAG00000004667 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold631_size122145-snap-gene-0.46 (protein:Tk01061 transcript:maker-scaffold631_size122145-snap-gene-0.46-mRNA-1 annotation:"40s ribosomal protein s3a")

HSP 1 Score: 77.0258 bits (188), Expect = 9.748e-19
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0

Query:    1 MIDIMIREIYVCDLKEVNNKLIPASIAVDVQKASRAICPLHKVYIRRVTLIEEPSIYLNKLVYIQRGRSGKN---TDSNTGHTIKR 83
            MI+I+ REI   DLKEV NKLIP SIA D+ KA + I PLH V+IR+V ++++P   L KL+ +    SGK    TD  TG  + R
Sbjct:  182 MIEIIQREISASDLKEVVNKLIPDSIAADITKACQGIFPLHDVHIRKVKVLKKPRFDLAKLMDLHGEGSGKGTATTDPTTGEVVSR 267

The following BLAST results are available for this feature:

BLAST of EMLSAG00000004667 vs. GO
BLAST of EMLSAG00000004667 vs. C. finmarchicus
BLAST of EMLSAG00000004667 vs. L. salmonis peptides
BLAST of EMLSAG00000004667 vs. SwissProt
BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
BLAST of EMLSAG00000004667 vs. nr
BLAST of EMLSAG00000004667 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000004667 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	1.404e-18	45.88	symbol:Rps3a "40S ribosomal protein S3a" species:1...	[more]
-	1.404e-18	45.88	symbol:Rps3a "ribosomal protein S3a" species:10116...	[more]
-	7.301e-18	44.19	symbol:RPS3A "Ribosomal protein S3A, isoform CRA_e...	[more]
-	8.532e-18	44.19	symbol:Rps3a1 "ribosomal protein S3A1" species:100...	[more]
-	1.575e-17	44.19	symbol:RPS3A "40S ribosomal protein S3a" species:9...	[more]
-	1.865e-17	44.71	symbol:RPS3A "40S ribosomal protein S3a" species:9...	[more]
-	2.185e-17	44.19	symbol:RPS3A "40S ribosomal protein S3a" species:9...	[more]
-	2.185e-17	44.19	symbol:RPS3A "40S ribosomal protein S3a" species:9...	[more]
-	2.185e-17	44.19	symbol:RPS3A "40S ribosomal protein S3a" species:9...	[more]
-	2.185e-17	44.19	symbol:RPS3A "40S ribosomal protein S3a" species:9...	[more]

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BLAST of EMLSAG00000004667 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 8


Match Name	E-value	Identity	Description
gi\|592788617\|gb\|GAXK01165951.1\|	1.016e-15	46.51	TSA: Calanus finmarchicus comp17_c0_seq1 transcrib...	[more]
gi\|592773881\|gb\|GAXK01180687.1\|	4.551e-12	37.50	TSA: Calanus finmarchicus comp3683991_c0_seq1 tran...	[more]
gi\|592882929\|gb\|GAXK01075446.1\|	3.350e-11	38.16	TSA: Calanus finmarchicus comp4774994_c0_seq1 tran...	[more]
gi\|592918886\|gb\|GAXK01039489.1\|	2.907e-10	40.26	TSA: Calanus finmarchicus comp6341404_c0_seq1 tran...	[more]
gi\|592755820\|gb\|GAXK01198593.1\|	2.447e-9	40.63	TSA: Calanus finmarchicus comp3328088_c0_seq1 tran...	[more]
gi\|592889748\|gb\|GAXK01068627.1\|	5.144e-8	30.65	TSA: Calanus finmarchicus comp7727509_c0_seq1 tran...	[more]
gi\|592803197\|gb\|GAXK01151371.1\|	5.626e-8	42.59	TSA: Calanus finmarchicus comp3879578_c0_seq1 tran...	[more]
gi\|592834191\|gb\|GAXK01123353.1\|	2.200e+0	41.18	TSA: Calanus finmarchicus comp6562015_c0_seq1 tran...	[more]

BLAST of EMLSAG00000004667 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAP00000004667	5.336e-66	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s242:44103...	[more]
EMLSAP00000010230	1.591e-24	57.65	pep:novel supercontig:LSalAtl2s:LSalAtl2s679:42093...	[more]

BLAST of EMLSAG00000004667 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1350987\|sp\|P49242.2\|RS3A_RAT	3.834e-19	45.88	RecName: Full=40S ribosomal protein S3a; AltName: ...	[more]
gi\|82219689\|sp\|Q98TX2.3\|RS3A_OPHHA	8.686e-19	45.35	RecName: Full=40S ribosomal protein S3a	[more]
gi\|3122836\|sp\|P97351.3\|RS3A_MOUSE	2.636e-18	44.19	RecName: Full=40S ribosomal protein S3a; AltName: ...	[more]
gi\|82198055\|sp\|Q642T2.3\|RS3A_XENTR	4.540e-18	44.19	RecName: Full=40S ribosomal protein S3a	[more]
gi\|82210070\|sp\|Q801S3.3\|RS3AA_XENLA	6.148e-18	44.19	RecName: Full=40S ribosomal protein S3a-A	[more]
gi\|47117764\|sp\|P61247.2\|RS3A_HUMAN	7.192e-18	44.19	RecName: Full=40S ribosomal protein S3a; AltName: ...	[more]
gi\|75075866\|sp\|Q4R4Z6.3\|RS3A_MACFA	7.498e-18	44.19	RecName: Full=40S ribosomal protein S3a	[more]
gi\|47117870\|sp\|P61246.1\|RS3A_FELCA	7.722e-18	44.19	RecName: Full=40S ribosomal protein S3a	[more]
gi\|82200468\|sp\|Q6DV02.3\|RS3A_GECJA	1.081e-17	44.19	RecName: Full=40S ribosomal protein S3a [Gekko jap...	[more]
gi\|269969552\|sp\|A8E604.1\|RS3AB_XENLA	1.494e-17	45.35	RecName: Full=40S ribosomal protein S3a-B	[more]

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BLAST of EMLSAG00000004667 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 9


Match Name	E-value	Identity	Description
gb\|EFA05373.1\|	1.575e-14	50.00	40S ribosomal protein S3a-like Protein [Tribolium ...	[more]
EAA08803.3	4.819e-13	42.31	AGAP003532-PA [Anopheles gambiae str. PEST]	[more]
XP_006565264.1	2.038e-12	35.29	PREDICTED: 40S ribosomal protein S3a [Apis mellife...	[more]
EFX89527.1	3.357e-12	45.31	hypothetical protein DAPPUDRAFT_303071 [Daphnia pu...	[more]
AAN06541.1	1.982e-11	38.37	ribosomal protein S3A, isoform B [Drosophila melan...	[more]
AFH06764.1	2.650e-11	38.37	ribosomal protein S3A, isoform F [Drosophila melan...	[more]
AAF59372.1	2.650e-11	38.37	ribosomal protein S3A, isoform A [Drosophila melan...	[more]
gb\|KPM08157.1\|	1.163e-10	41.03	40S ribosomal protein S3a-like protein [Sarcoptes ...	[more]
EEB15398.1	1.335e-10	40.54	40S ribosomal protein S3A, putative [Pediculus hum...	[more]

BLAST of EMLSAG00000004667 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225713754\|gb\|ACO12723.1\|	8.989e-23	60.00	40S ribosomal protein S3a [Lepeophtheirus salmonis...	[more]
gi\|852809528\|ref\|XP_012892708.1\|	1.068e-17	45.35	PREDICTED: 40S ribosomal protein S3a-like, partial...	[more]
gi\|795226062\|ref\|XP_011850963.1\|	1.289e-17	45.88	PREDICTED: 40S ribosomal protein S3a-like isoform ...	[more]
gi\|432093075\|gb\|ELK25365.1\|	3.460e-17	44.19	40S ribosomal protein S3a [Myotis davidii]	[more]
gi\|45269041\|gb\|AAS55933.1\|	4.536e-17	44.19	40S ribosomal protein S3a, partial [Sus scrofa]	[more]
gi\|211907083\|gb\|ACJ12076.1\|	6.089e-17	45.35	ribosomal protein S3a, partial [Bombina orientalis...	[more]
gi\|149048221\|gb\|EDM00797.1\|	6.234e-17	45.88	rCG62728, isoform CRA_b [Rattus norvegicus]	[more]
gi\|119597984\|gb\|EAW77578.1\|	6.465e-17	45.35	hCG33299, isoform CRA_b [Homo sapiens]	[more]
gi\|585654026\|ref\|XP_006884543.1\|	7.143e-17	46.51	PREDICTED: 40S ribosomal protein S3a-like [Elephan...	[more]
gi\|1072269917\|ref\|XP_018420651.1\|	7.528e-17	45.35	PREDICTED: 40S ribosomal protein S3a [Nanorana par...	[more]

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BLAST of EMLSAG00000004667 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold631_size122145-snap-gene-0.46	9.748e-19	48.84	protein:Tk01061 transcript:maker-scaffold631_size1...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s242	supercontig	LSalAtl2s242:441032..441325 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	augustus-LSalAtl2s242-processed-gene-4.0
Biotype	protein_coding
Evidence	IEA
Note	40S ribosomal protein S3a

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000004667 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000004667	EMLSAT00000004667-700514	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s242:441032..441325-

gene from alignment at LSalAtl2s242:441032..441325-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000004667-687433 ID=EMLSAG00000004667-687433|Name=EMLSAG00000004667|organism=Lepeophtheirus salmonis|type=gene|length=294bp|location=Sequence derived from alignment at LSalAtl2s242:441032..441325- (Lepeophtheirus salmonis)
ATGATTGACATTATGATCCGTGAAATATACGTCTGTGATTTGAAGGAAGT
TAACAAYAAGCTCATTCCTGCTTCTATAGCCGTCGACGTTCAAAAGGCAT
CTAGAGCAATCTGTCCACTTCACAAAGTGTATATACGAAGGGTCACGTTA
ATAGAAGAACCAAGTATATATTTGAACAAATTGGTGTATATTCAAAGAGG
GAGAAGTGGAAAGAATACGGATTCCAACACTGGGCATACCATTAAGAGAA
CAAGAAGTKTAATTCATAACATCAAATTTCCTGAAACTTCTTAG

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