EMLSAG00000008222, EMLSAG00000008222-690988 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000008222 (pep:novel supercontig:LSalAtl2s:LSalAtl2s495:187961:189131:1 gene:EMLSAG00000008222 transcript:EMLSAT00000008222 description:"augustus-LSalAtl2s495-processed-gene-2.6") HSP 1 Score: 402.519 bits (1033), Expect = 5.285e-144 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 Query: 1 MGPRQYFKEKPHLRIDPIIKVHISWSTPAGKDRKEEREKDRDRNKKREKDRDRNKEREKDRDRNKEREKEKSRGSKRVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDFELLDLNARKKLKSYAVPSLSILVASPSSDEPYPSRDIRKETWERKELVKQLLEGPGNQYSLGNRG 198 MGPRQYFKEKPHLRIDPIIKVHISWSTPAGKDRKEEREKDRDRNKKREKDRDRNKEREKDRDRNKEREKEKSRGSKRVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDFELLDLNARKKLKSYAVPSLSILVASPSSDEPYPSRDIRKETWERKELVKQLLEGPGNQYSLGNRG Sbjct: 1 MGPRQYFKEKPHLRIDPIIKVHISWSTPAGKDRKEEREKDRDRNKKREKDRDRNKEREKDRDRNKEREKEKSRGSKRVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDFELLDLNARKKLKSYAVPSLSILVASPSSDEPYPSRDIRKETWERKELVKQLLEGPGNQYSLGNRG 198
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000002915 (pep:novel supercontig:LSalAtl2s:LSalAtl2s167:417749:418522:1 gene:EMLSAG00000002915 transcript:EMLSAT00000002915 description:"augustus-LSalAtl2s167-processed-gene-4.5") HSP 1 Score: 160.614 bits (405), Expect = 1.967e-48 Identity = 87/117 (74.36%), Postives = 90/117 (76.92%), Query Frame = 0 Query: 81 IPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDF------ELLDLNARKKLKSYAVPSLSILVASPSSDEPYPSRDIRKETWERKELVKQLLEGPGNQ 191 + CC + DAQYFA PQK LM QRLWISVCRRKD INIK A+ICDRHFTSNDF ELLDL ARKKLKS AVPSL I ASPSSDEP SRDIRKET ERKELVKQLLE Q Sbjct: 1 MACCPNPRDAQYFAFPQKKLMLQRLWISVCRRKDSINIKNAKICDRHFTSNDFERNLQAELLDLKARKKLKSDAVPSLHIPFASPSSDEPKSSRDIRKETRERKELVKQLLEASKVQ 117
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000010123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s668:164231:167969:-1 gene:EMLSAG00000010123 transcript:EMLSAT00000010123 description:"snap-LSalAtl2s668-processed-gene-1.39") HSP 1 Score: 113.62 bits (283), Expect = 3.297e-30 Identity = 61/83 (73.49%), Postives = 63/83 (75.90%), Query Frame = 0 Query: 89 DAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSN-DFELLDLNARKKLKSYAVPSLSILVASPSSDEPYPSRDI 170 DAQYFA QK LM QRLWIS CRRKDPINIK A+ICDRHF N ELLDL RKKLK +VPSL IL ASPSSDEP S DI Sbjct: 9 DAQYFAFSQKKLMLQRLWISFCRRKDPINIKNAKICDRHFEWNLQAELLDLKCRKKLKRDSVPSLHILFASPSSDEPQSSSDI 91
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000005942 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3212:29478:31623:1 gene:EMLSAG00000005942 transcript:EMLSAT00000005942 description:"maker-LSalAtl2s3212-augustus-gene-0.2") HSP 1 Score: 58.9214 bits (141), Expect = 5.000e-11 Identity = 46/155 (29.68%), Postives = 67/155 (43.23%), Query Frame = 0 Query: 65 KEREKEKSRGSKRVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDF------ELLDLNARKKLKSYAVPSLSILVASPSSDEPYPSRDIRK---------------ETWERKELVKQLLEGPGNQYSLGNRG 198 K E K R S CA+ C D Y P+ + Q W+ C+RKD N K + IC HF+ + + ELL L +RK L+ ++PS ++ +S SS R R E + E+V Q++E P Q S + G Sbjct: 57 KPLESTKRRHSSATCAVASCPSPADTSYHNFPKDPALLQN-WVKACKRKDNFNPKTSRICSNHFSQDCYERDLRNELLGLVSRKLLRKGSIPSANLYTSSVSSLTIPSERAGRSSKMEIHQTIEPPLAVEHLDSSEMVPQVVEIPQIQISNVSVG 210
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000008926 (pep:novel supercontig:LSalAtl2s:LSalAtl2s555:158054:228428:1 gene:EMLSAG00000008926 transcript:EMLSAT00000008926 description:"maker-LSalAtl2s555-augustus-gene-1.35") HSP 1 Score: 57.7658 bits (138), Expect = 2.798e-10 Identity = 33/94 (35.11%), Postives = 52/94 (55.32%), Query Frame = 0 Query: 77 RVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDF------ELLDLNARKKLKSYAVPSLSILVASPSSDEP 164 ++CAI C Y P KN++ QR+W ++C+RKD + A++C HF + ELL+L RK+L + VPSL L+ +P+ +P Sbjct: 150 KICAIFGCKSPDGVIYHNFP-KNMVRQRIWKNLCKRKDTFKAENAQVCSMHFNDGSYRRDLEHELLNLTPRKRLNTDTVPSL--LLPTPTVPKP 240
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000004012 (pep:novel supercontig:LSalAtl2s:LSalAtl2s214:185584:187441:1 gene:EMLSAG00000004012 transcript:EMLSAT00000004012 description:"maker-LSalAtl2s214-snap-gene-2.56") HSP 1 Score: 50.0618 bits (118), Expect = 8.753e-8 Identity = 31/91 (34.07%), Postives = 45/91 (49.45%), Query Frame = 0 Query: 67 REKEKSRGSKRVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSN------DFELLDLNARKKLKSYAVPS 151 ++ +K R S CAI C + Y P K+ R W+ CRR +N K + IC HF+ + F+LL + +RK LK +VPS Sbjct: 70 QQSKKRRHSSATCAITSCPSPSNVSYHYFP-KDPTLLRNWVKACRRGYKLNPKTSRICSNHFSQDCYQSDFSFKLLGIVSRKLLKKGSVPS 159
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000007000 (pep:novel supercontig:LSalAtl2s:LSalAtl2s397:1189083:1189928:1 gene:EMLSAG00000007000 transcript:EMLSAT00000007000 description:"augustus-LSalAtl2s397-processed-gene-12.7") HSP 1 Score: 49.6766 bits (117), Expect = 9.392e-8 Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 0 Query: 71 KSRGSKRVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDFE------LLDLNARKKLKSYAVPSLSILVASPSSDEPYPS---RDIRKETWERKELVKQLLEG 187 +SR VCA+ C + Y P K+ + +++W C RK + K IC+ HF N++E LL L R+KLKS A+P+ +++ ++P P+ R+ R+ +R + V +L+ Sbjct: 2 ESRNKTWVCAVAICGSPNNXVYHDFP-KDCLRRKIWERACHRKGRLG-KTPRICENHFEENNYERDLRNELLGLPLRRKLKSDAIPTKNLV----PGEKPLPTPNEREQREAKKKRMDFVDSILKA 121
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Match: EMLSAP00000004491 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2344:81287:81809:1 gene:EMLSAG00000004491 transcript:EMLSAT00000004491 description:"maker-LSalAtl2s2344-augustus-gene-0.11") HSP 1 Score: 46.2098 bits (108), Expect = 3.188e-7 Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 0 Query: 69 KEKSRGSKRVCAIPCCLDRWDAQYFAIPQKNLMHQRLWISVCRRKDPINIKIAEICDRHFTSNDF------ELLDLNARKKLK 145 K+K R +VC++ C + D Y + P++ + Q +W+ C R+ +N K A IC HF +DF ELL L K+LK Sbjct: 34 KKKKRRHHQVCSVANCPNPRDVSYHSFPKEPEL-QIMWVQSCGREK-VNTKTARICGSHFLKDDFLRDLKNELLGLPLVKRLK 114 The following BLAST results are available for this feature:
BLAST of EMLSAG00000008222 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000008222 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000008222 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 8
BLAST of EMLSAG00000008222 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000008222 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000008222 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000008222 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s495:187961..189131+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000008222-690988 ID=EMLSAG00000008222-690988|Name=EMLSAG00000008222|organism=Lepeophtheirus salmonis|type=gene|length=1171bp|location=Sequence derived from alignment at LSalAtl2s495:187961..189131+ (Lepeophtheirus salmonis)back to top Add to Basket
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