EMLSAG00000009166, EMLSAG00000009166-691932 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592936094|gb|GAXK01022459.1| (TSA: Calanus finmarchicus comp797239_c0_seq20 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 2.082e-3 Identity = 27/98 (27.55%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 159 SDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEI------------KLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAV 244 DS +DL+E+A++FV A ++V +W EI + ++R F S+ +N D + PF+P++I DLK+G +R + Sbjct: 550 GDSEGDTDDLIEDARNFVKAAQIKVVDNEDWKEIDEKRRKRRITRKERNEKRESGRF----GSDGEENKKDLNGGTTCEPFLPRRISDLKVGYLVRVI 831
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592936099|gb|GAXK01022454.1| (TSA: Calanus finmarchicus comp797239_c0_seq15 transcribed RNA sequence) HSP 1 Score: 41.5874 bits (96), Expect = 2.102e-3 Identity = 27/98 (27.55%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 159 SDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEI------------KLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAV 244 DS +DL+E+A++FV A ++V +W EI + ++R F S+ +N D + PF+P++I DLK+G +R + Sbjct: 550 GDSEGDTDDLIEDARNFVKAAQIKVVDNEDWKEIDEKRRKRRITRKERNEKRESGRF----GSDGEENKKDLNGGTTCEPFLPRRISDLKVGYLVRVI 831
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592936103|gb|GAXK01022450.1| (TSA: Calanus finmarchicus comp797239_c0_seq11 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 2.737e-3 Identity = 27/98 (27.55%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 159 SDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEI------------KLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAV 244 DS +DL+E+A++FV A ++V +W EI + ++R F S+ +N D + PF+P++I DLK+G +R + Sbjct: 735 GDSEGDTDDLIEDARNFVKAAQIKVVDNEDWKEIDEKRRKRRITRKERNEKRESGRF----GSDGEENKKDLNGGTTCEPFLPRRISDLKVGYLVRVI 1016
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592936105|gb|GAXK01022448.1| (TSA: Calanus finmarchicus comp797239_c0_seq9 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 2.841e-3 Identity = 27/98 (27.55%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 159 SDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEI------------KLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAV 244 DS +DL+E+A++FV A ++V +W EI + ++R F S+ +N D + PF+P++I DLK+G +R + Sbjct: 858 GDSEGDTDDLIEDARNFVKAAQIKVVDNEDWKEIDEKRRKRRITRKERNEKRESGRF----GSDGEENKKDLNGGTTCEPFLPRRISDLKVGYLVRVI 1139
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592936112|gb|GAXK01022441.1| (TSA: Calanus finmarchicus comp797239_c0_seq2 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 3.198e-3 Identity = 27/98 (27.55%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 159 SDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEI------------KLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAV 244 DS +DL+E+A++FV A ++V +W EI + ++R F S+ +N D + PF+P++I DLK+G +R + Sbjct: 1548 GDSEGDTDDLIEDARNFVKAAQIKVVDNEDWKEIDEKRRKRRITRKERNEKRESGRF----GSDGEENKKDLNGGTTCEPFLPRRISDLKVGYLVRVI 1829
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592936113|gb|GAXK01022440.1| (TSA: Calanus finmarchicus comp797239_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 3.208e-3 Identity = 27/98 (27.55%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 159 SDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEI------------KLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAV 244 DS +DL+E+A++FV A ++V +W EI + ++R F S+ +N D + PF+P++I DLK+G +R + Sbjct: 1575 GDSEGDTDDLIEDARNFVKAAQIKVVDNEDWKEIDEKRRKRRITRKERNEKRESGRF----GSDGEENKKDLNGGTTCEPFLPRRISDLKVGYLVRVI 1856
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592936091|gb|GAXK01022462.1| (TSA: Calanus finmarchicus comp797239_c0_seq23 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 1.069e-1 Identity = 23/87 (26.44%), Postives = 43/87 (49.43%), Query Frame = 0 Query: 168 LLEEAKDFVNIASKQLVTLREWNEI----------KLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAV 244 L+E+A++FV A ++V +W EI + ++ ++ D E +N D + PF+P++I DLK+G +R + Sbjct: 195 LIEDARNFVKAAQIKVVDNEDWKEIDEKRRKRRITRKERNEKRESGRFGSDGE--ENKKDLNGGTTCEPFLPRRISDLKVGYLVRVI 449
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Match: gi|592779583|gb|GAXK01174985.1| (TSA: Calanus finmarchicus comp1119307_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 7.077e+0 Identity = 28/110 (25.45%), Postives = 49/110 (44.55%), Query Frame = 0 Query: 39 EDHLLQNSERV-WSSCSNRSNNYDGSTSNLNPPEKSVKGWKSEPILSSPSVHC--SRTTKISVRLKVPKSDHTEKLLEASAHYFQDVKALKLLM-----ERHQNRKAFQP 140 +D ++S+R+ + R NNY T +LNPP + ++ S + SP + + ++ L VP + E + + L+LL ER +N+ FQP Sbjct: 4555 DDESTRDSKRILFDKIKKRPNNYRDDTEDLNPPNRFLRPVNSNEDIFSPPTNTLKQKDYDFAIGLDVPTGTLKTRPHEHTLPNKKQNPLLRLLFPNQNDEREKNQ--FQP 4878
BLAST of EMLSAG00000009166 vs. L. salmonis peptides
Match: EMLSAP00000009166 (pep:novel supercontig:LSalAtl2s:LSalAtl2s578:97400:158677:1 gene:EMLSAG00000009166 transcript:EMLSAT00000009166 description:"maker-LSalAtl2s578-snap-gene-1.12") HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0 Query: 1 MAFIDEEKETSEAVSSLHKALRVLKEELSLKDRKIQELEDHLLQNSERVWSSCSNRSNNYDGSTSNLNPPEKSVKGWKSEPILSSPSVHCSRTTKISVRLKVPKSDHTEKLLEASAHYFQDVKALKLLMERHQNRKAFQPEVNDDIVNNGINVENACSSDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEIKLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAVINGDIRDAIVIELLPRFQSLKIKDVILLDNDDLHT 279 MAFIDEEKETSEAVSSLHKALRVLKEELSLKDRKIQELEDHLLQNSERVWSSCSNRSNNYDGSTSNLNPPEKSVKGWKSEPILSSPSVHCSRTTKISVRLKVPKSDHTEKLLEASAHYFQDVKALKLLMERHQNRKAFQPEVNDDIVNNGINVENACSSDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEIKLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAVINGDIRDAIVIELLPRFQSLKIKDVILLDNDDLHT Sbjct: 1 MAFIDEEKETSEAVSSLHKALRVLKEELSLKDRKIQELEDHLLQNSERVWSSCSNRSNNYDGSTSNLNPPEKSVKGWKSEPILSSPSVHCSRTTKISVRLKVPKSDHTEKLLEASAHYFQDVKALKLLMERHQNRKAFQPEVNDDIVNNGINVENACSSDSNDSVEDLLEEAKDFVNIASKQLVTLREWNEIKLKKQRRKTPFPLTKDSETGDNPADASKLVGKNPFIPQKIQDLKLGSKIRAVINGDIRDAIVIELLPRFQSLKIKDVILLDNDDLHT 279 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009166 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009166 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000009166 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000009166 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009166 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009166 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009166 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s578:97400..158677+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009166-691932 ID=EMLSAG00000009166-691932|Name=EMLSAG00000009166|organism=Lepeophtheirus salmonis|type=gene|length=61278bp|location=Sequence derived from alignment at LSalAtl2s578:97400..158677+ (Lepeophtheirus salmonis)back to top Add to Basket
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