EMLSAT00000000025, EMLSAT00000000025-695872 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000025
Unique NameEMLSAT00000000025-695872
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1005supercontigLSalAtl2s1005:6858..7782 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000025 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000025EMLSAG00000000025-682791Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000099EMLSAE00000000099-709027Lepeophtheirus salmonisexon
EMLSAE00000000100EMLSAE00000000100-709028Lepeophtheirus salmonisexon
EMLSAE00000000101EMLSAE00000000101-709029Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768672auto768672Lepeophtheirus salmonispolypeptide
EMLSAP00000000025EMLSAP00000000025Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000025

>EMLSAP00000000025 ID=EMLSAP00000000025|Name=EMLSAP00000000025|organism=Lepeophtheirus salmonis|type=polypeptide|length=264bp
MIRFVCALLFLVTAANAVPPQIKYSESFMKVKSMRHRFGGRIVGGEEAEP
NSIPFQISFQTTGDFHFCGGSVMDKDTVITAAHCCDSFNSWEVQVVAGEH
DLFSTSGDEQKIPVKDITYHEMFGSLGMNYDICLLKLKSSLDLNEKVKPV
ALPKKDQEFTGDVVVSGWGTISSNGLSSPVLRSVTVQVVSDEYCSDAYYG
SNDETNICAAAPGKDSCQGDSGGPLAQDGTLVGIVSWGYGCATPGYPGVY
AKVSMFIDWIAQHK
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mRNA from alignment at LSalAtl2s1005:6858..7782-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000025-695872 ID=EMLSAT00000000025-695872|Name=EMLSAT00000000025|organism=Lepeophtheirus salmonis|type=mRNA|length=925bp|location=Sequence derived from alignment at LSalAtl2s1005:6858..7782- (Lepeophtheirus salmonis)
ATGATTAGATTTGTCTGTGCCCTTTTGTTCCTGGTTACTGCAGCCAATGC
TGTTCCCCCTCAAATTAAATACTCTGAGAGTTTCATGAAAGTCAAGTCAA
TGAGACACAGATTCGGGGGAAGAATCGTTGGAGGAGAAGAAGCTGAGCCT
AACTCAATTCCCTTCCAAATTTCATTCCAAACTACTGGAGATTTCCACTT
TTGTGGTGGTTCTGTCATGGACAAAGATACTGTTATCACTGCTGCTCATT
GCTGTGACAGCTTTAACTCATGGGAAGTCCAAGTTGTTGCTGGTGAACAC
GATCTCTTTTCCACTAGTGGGGATGAACAAAAGATTCCCGTAAAAGATAT
CACCTACCACGAGATGTTTGGATCCCTGGGTATGAACTACGATATTTGTC
TTTTGAAATTGAAGTCGTCCTTGGACCTCAATGAGTAAGTACTATATACT
ACTTTTCTACCATTTCTTTTTAAGTATTTAATAATTGTTCCTTCTGTAGA
AAAGTTAAGCCCGTTGCTCTCCCAAAAAAGGACCAAGAATTCACTGGTGA
TGTTGTTGTGTCCGGATGGGGAACTATCTCATCTAATGGACTATCTTCTC
CAGTCCTTAGATCAGTTACTGTCCAAGTTGTTTCTGATGAGTGTGAGACT
ATAAAATATATTCTTACCTTGAAAACGAGTTTACCTCTGTAATGTATAAT
ATAATAGACTGTAGCGATGCTTACTATGGATCAAACGATGAGACCAACAT
CTGTGCTGCTGCCCCTGGAAAGGACTCCTGCCAAGGTGATTCTGGTGGTC
CATTGGCTCAAGACGGAACCCTCGTTGGTATTGTTTCTTGGGGATATGGT
TGTGCTACTCCTGGATACCCGGGTGTCTACGCAAAGGTATCCATGTTCAT
TGACTGGATTGCTCAACACAAATAG
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