EMLSAT00000000147, EMLSAT00000000147-695994 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000147
Unique NameEMLSAT00000000147-695994
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1022supercontigLSalAtl2s1022:45727..49241 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000147 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000147EMLSAG00000000147-682913Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000663EMLSAE00000000663-709591Lepeophtheirus salmonisexon
EMLSAE00000000664EMLSAE00000000664-709592Lepeophtheirus salmonisexon
EMLSAE00000000665EMLSAE00000000665-709593Lepeophtheirus salmonisexon
EMLSAE00000000666EMLSAE00000000666-709594Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770495auto770495Lepeophtheirus salmonispolypeptide
EMLSAP00000000147EMLSAP00000000147Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000147

>EMLSAP00000000147 ID=EMLSAP00000000147|Name=EMLSAP00000000147|organism=Lepeophtheirus salmonis|type=polypeptide|length=110bp
MKLLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHGFWSQPRTERQARSK
GYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRG
ISNDLSSQPY
back to top

mRNA from alignment at LSalAtl2s1022:45727..49241+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000147-695994 ID=EMLSAT00000000147-695994|Name=EMLSAT00000000147|organism=Lepeophtheirus salmonis|type=mRNA|length=3515bp|location=Sequence derived from alignment at LSalAtl2s1022:45727..49241+ (Lepeophtheirus salmonis)
TAAAAGTGCAGAATAATGAAACTCCTGCTTATATTCGTCTTTTTAGCCTC
CCTGGTAAGAAATAAATATTCAATACTTTTTATATTGTCTCATTAAATAA
ATGATATATAATTTCAGGGTGCAGTTTATGGCTCTCAAAACTGGCACGCC
CTAAGGACAACCTTTAGTCTTCTTCCCTTCCATGGATTCTGGAGTCAACC
TAGGACAGAGCGTCAAGCCAGATCCAAAGGATATATCAAGATCAGCGACT
GCAATGATATCAATGCGTATGTAACATACCTCTGAACATTAGTAGTTACA
TTATGGATTTAATCATTATTTTAGGTTCCCTGGGAGTCGTTACATTCCAA
ACTATGATCACCCCAACATTGTTTTCATTTATGATGTAAATGGATATATT
GCTGGAATTCAAAGTATTGTGGATCAGGTAAGAGGAATATCAAATGATTT
ATCATCACAGCCCTACTAATATGTATGTCGTCCTGATTTAACCAATAAAA
AAACTCAGGATCAGGGAAAAATCCCAACTTATTTTTTTAAAATCATGTAG
ATGTTACGAGGAGGCTGGAAAATCGGCCATTTTGCAAAATGCCCGGGCAA
TCTGTACAATTTCCAATAGAGTGGTCAATGTTTATTTTAAATTCCTTTAC
AATGTCATTTAAAATGATTCTGAGTAATATTATTACTAAACAATTCATTG
TAAGCAATTTGATCATTATGGATTTAATTAACATACAATTTCATTGAACT
TAAAGTAGAATTTCTAATTAAAATTGTTGCAAAATCCAAGCGCATAGAGC
GCTCATAATACGCACAAAGATTGAAATATATTTGAGAGTACCTCAATTTT
TCTCGGACTCTCAAAAGGATGGCAGTTTTGCTTTATTAAGCAGTTTGTCC
TTGAAAAATTATATTTATATTTAGTCATAAATTGGAATAAATTTGTATTT
AATGGTTTTCTTTTATATAGACATTTTCCTATTATTTTTTCTTAATAGAT
TATGTGGCCCATTCAAATATTTCAAGTTGCAATGCGGCCTATTATATTAA
AAGGCTTGCCATCCCTGATCTAGTATCTTTTTATTATATTCAGGCTATAA
AACTCGGCCTCAGGCAAAAGGTTTTGCAGGTGGACCAAAACCTATCGCTA
ACATTATCTTGAGTATTAACGACCCCTTCGAAAATATATTATAATTCGCC
CCAGCCCACAGATTATGCTAGTTAACCGCTTCTCCAGAAGGGGGATCAAA
ATCTATCCCCACCACTTTCCTGAGTATCAAGGACCCTTTCTAATATCCTA
GTGCAAGTGGACCTCTGGTCCAAAAGGTGTAGCATTACCCACCACCACCG
CTGCCTTGATCACCAAGGACACCTTTCAATATCCTATAACTTACCCAGCC
CATAGGCTGTGCAAGTGAACCACRGGTCCCTGGAGCTTACTTGATACCCT
TAAATATTTTTCAATGTTTGTACGGATCATGAGCAGTTTACGCGTTTTTA
TGATAAGGTGACAATTTCAAATTACTCGCAATCCTTTTATCTGACAATGT
AAATGAAGTTGAAATGGTCATAGATCACCCTCTACTAGAGATGTTATAGA
TTCCCCGGGCATTTTGCACATTTCCCACTCTAACGTGCATTTGTACATTG
ACCAACTTTCCACATGGTCCGTAACATATGCATACCATAGACGTACTTGA
GTCACTAGTAGTCTCCGCATTCAGATTTTTCGTGATACCTATAAACATTA
GCTGGGTCATTCCACATCAAGTGTACAACCCCTCACGGCATGAACATCAC
CGATGTTCATGATTTTTGGTGAGCTGGCTTTTCTATATGACAGTGTGTGA
AATATTAGGGTTCTGTGKCTCACCTGGGTAGTTCTAGGCCCGCCACAAGT
TGGTCCTGATGCGTAAGACCTGTGTTGTTTAGAAGGCCATAATTCCGCTC
ATAGTGGCTCGATTTTAACACAAATTACGTTGAAAGATGCACGAGAACAC
AAACTTTAACTTATATTCGATCGTAATCTTATTTTAATCAAAAATAAAAG
TTTGGGGTTCTGGTGCGCCTTCAAAATGGCGCCCTGCCATGCAGCAACCC
CGATTTTGTTTTAATTTTCGTAGAATACGTATCAGTATATGTTTCGTAAC
ATATTCAAAATTCAGAGTGGGATCTTAATGGGATCTCTTCCAACAAGAGC
ATTATTTAGAGTATATAGAACCGCTTTCATAGCATATCGGTATGATTTTT
TTATATTTAAACTCGGTATTTACGGCCCTCATTTTATTTATGCAACTGTA
TTTGGCCCCAATAAGGCCTTTCAACTATATAGTTTATCACTTCTTAATTC
TGAGTCATTGTGACGATGCATTTTAACTACTTTAATTTGCAATTTGTGCA
GTCTCTAAAAAATTAATCAGAATAATTAGTTGTTGATAGAAACGGACGAC
TACAATTAGTTGCAGAATACAAATGGTGAATTCAGACTCCATCTTGAAAA
AAAGTCATTTTAGTTTGCTTTTGTATTGAAAAGACCACATATATACAATT
TTTTAAATATATTTATATAAAATTTATGACGTAGGCTGCCTGGGACAATG
GCTAKGTAAACTTCCACAACAAATCAATGTATCAGCCAAGTACTATTAAT
GGAAAAGATGTTTTCCTAACCACGGCTTATTTCGTGGACCCACAAATTAT
TTGCTCAACTGGAAGAACTCCTTCTCAATACAAAACCCAAGGAACAGGAT
ATACACTTATTTTCCAAAATGGAGAAGATATTTCCCAAAAGAACTTGATG
GAAATACCTCTAATAGAAGAAAATTTGAAGGACTCTGTAAGTGTGCCACT
ATAATTAGAGTAGTAAATAATTTTAGGCACTATTAGAATGTTTTAAAAAA
TAACAACATAATATAAATAGACGCAATATCTAAACAGCTTTAGGGGGAGA
AAAAAAACTCAGACGCTAGAAAATGCTTATAATTTACAATTTTCACTATA
ATGTCCAAACTATTGTTATACTTGTATTATTTAGGATTTTTGGAACGAAC
ATCTTTGTTTCATCAACATGGGCCAGCATTATTTTAATCTTCATTAAGAT
CCCGAGGAGTCCTGTGAAAATCTTTTCCCTGTTCAACTCATTTATAAAGA
AGGACTTCTCCATGGATTTGTTTGGCAACACTTTGGAACTCTTCCAGGAG
ATTTGTAAGTAGTTGATATATTTGGGTGTTTCTGTTGGTGCTAACATGAT
TTCTATTTAATTTCAACTCTAGCMGGGASCARCCRCCAGCWCTAGCCATT
AGCAAAATCATTAAGGATCCTCCAACCTATATTTTGGATGCCATTGGTAC
TGTTGGACTCAGCACCATGCACATTTACTTTAAAAACTACCTGTCTATTT
GTAATTAATTTTACATTACATAATTGTAACAGACTGACATTTTAAATAAA
TCAATGATTTTTTTTTAATCATCGTTTCTATTTATAATGCATATATCTAT
TTGATGTCATATTTT
back to top
Add to Basket